RNA–Protein interactions for RNA: ENST00000489614.5

NOD1-208, Transcript of nucleotide binding oligomerization domain containing 1, humanhuman

TSL 2

Gene NOD1, Length 3,098 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NOD1-208ENST00000489614 EDC3Q96F86 508 aaKnown RBP11.49□□□□□ -0.57
NOD1-208ENST00000489614 BRIP1Q9BX63 1249 aa11.49□□□□□ -0.57
NOD1-208ENST00000489614 CNNM1Q9NRU3 951 aa11.49□□□□□ -0.57
NOD1-208ENST00000489614 ZNF446Q9NWS9 450 aa11.49□□□□□ -0.57
NOD1-208ENST00000489614 TFCP2L1Q9NZI6 479 aa11.49□□□□□ -0.57
NOD1-208ENST00000489614 A0A0D9SFI3 127 aa11.48□□□□□ -0.57
NOD1-208ENST00000489614 IRF6O14896 467 aa11.48□□□□□ -0.57
NOD1-208ENST00000489614 GUCY2CP25092 1073 aa11.48□□□□□ -0.57
NOD1-208ENST00000489614 HSPA4P34932 840 aa11.48□□□□□ -0.57
NOD1-208ENST00000489614 RPS8P62241 208 aaKnown RBP11.48□□□□□ -0.57
NOD1-208ENST00000489614 CLEC17AQ6ZS10 378 aa11.48□□□□□ -0.57
NOD1-208ENST00000489614 PAG1Q9NWQ8 432 aa11.48□□□□□ -0.57
NOD1-208ENST00000489614 ZMYM1Q5SVZ6 1142 aa11.48□□□□□ -0.57
NOD1-208ENST00000489614 RPAP1Q9BWH6 1393 aaPredicted RBP11.48□□□□□ -0.57
NOD1-208ENST00000489614 GOLIM4O00461 696 aa11.47□□□□□ -0.57
NOD1-208ENST00000489614 PHKA1P46020 1223 aa11.47□□□□□ -0.57
NOD1-208ENST00000489614 NUCB2P80303 420 aa11.47□□□□□ -0.57
NOD1-208ENST00000489614 NMIQ13287 307 aaPredicted RBP11.47□□□□□ -0.57
NOD1-208ENST00000489614 RILPL2Q969X0 211 aa11.47□□□□□ -0.57
NOD1-208ENST00000489614 JRKLQ9Y4A0 524 aa11.47□□□□□ -0.57
NOD1-208ENST00000489614 DICER1Q9UPY3 1922 aaKnown RBP11.47□□□□□ -0.57
NOD1-208ENST00000489614 WTIPA6NIX2 430 aaPredicted RBP11.47□□□□□ -0.57
NOD1-208ENST00000489614 CYP2E1P05181 493 aaPredicted RBP11.47□□□□□ -0.57
NOD1-208ENST00000489614 SRGNP10124 158 aa11.47□□□□□ -0.57
NOD1-208ENST00000489614 ANAPC15P60006 121 aa11.47□□□□□ -0.57
NOD1-208ENST00000489614 ST5P78524 1137 aa11.47□□□□□ -0.57
NOD1-208ENST00000489614 REC8O95072 547 aa11.46□□□□□ -0.57
NOD1-208ENST00000489614 TSGA10IPQ3SY00 556 aa11.46□□□□□ -0.57
NOD1-208ENST00000489614 GRIPAP1Q4V328 841 aa11.46□□□□□ -0.57
NOD1-208ENST00000489614 CCDC112Q8NEF3 446 aa11.46□□□□□ -0.57
NOD1-208ENST00000489614 RNF217Q8TC41 542 aa11.46□□□□□ -0.57
NOD1-208ENST00000489614 MAP4K1Q92918 833 aa11.46□□□□□ -0.57
NOD1-208ENST00000489614 FAM227BQ96M60 508 aa11.46□□□□□ -0.57
NOD1-208ENST00000489614 UQCRFS1P1P0C7P4 283 aa11.46□□□□□ -0.57
NOD1-208ENST00000489614 SLC5A1P13866 664 aa11.46□□□□□ -0.57
NOD1-208ENST00000489614 NECTIN1Q15223 517 aa11.46□□□□□ -0.57
NOD1-208ENST00000489614 CASC1Q6TDU7 716 aa11.46□□□□□ -0.57
NOD1-208ENST00000489614 ZGPATQ8N5A5 531 aaKnown RBP11.46□□□□□ -0.57
NOD1-208ENST00000489614 KCNF1Q9H3M0 494 aa11.46□□□□□ -0.57
NOD1-208ENST00000489614 HELLSQ9NRZ9 838 aa11.46□□□□□ -0.57
NOD1-208ENST00000489614 HMG20BQ9P0W2 317 aa11.46□□□□□ -0.57
NOD1-208ENST00000489614 NDUFB9Q9Y6M9 179 aa11.46□□□□□ -0.57
NOD1-208ENST00000489614 BAZ2AQ9UIF9 1905 aaKnown RBP11.46□□□□□ -0.58
NOD1-208ENST00000489614 SIPA1L1O43166 1804 aa11.46□□□□□ -0.58
NOD1-208ENST00000489614 TAF5LO75529 589 aa11.46□□□□□ -0.58
NOD1-208ENST00000489614 CHGBP05060 677 aa11.46□□□□□ -0.58
NOD1-208ENST00000489614 IFIT1P09914 478 aaKnown RBP11.46□□□□□ -0.58
NOD1-208ENST00000489614 BAG6P46379 1132 aa11.46□□□□□ -0.58
NOD1-208ENST00000489614 MPHOSPH8Q99549 860 aa11.46□□□□□ -0.58
NOD1-208ENST00000489614 ANKRD2Q9GZV1 360 aa11.46□□□□□ -0.58
NOD1-208ENST00000489614 SALL1Q9NSC2 1324 aa11.45□□□□□ -0.58
NOD1-208ENST00000489614 MYH15Q9Y2K3 1946 aa11.45□□□□□ -0.58
NOD1-208ENST00000489614 ZAP70P43403 619 aa11.45□□□□□ -0.58
NOD1-208ENST00000489614 PTH1RQ03431 593 aa11.45□□□□□ -0.58
NOD1-208ENST00000489614 RASGRF1Q13972 1273 aa11.45□□□□□ -0.58
NOD1-208ENST00000489614 TMC4Q7Z404 712 aa11.45□□□□□ -0.58
NOD1-208ENST00000489614 DEFB132Q7Z7B7 95 aa11.45□□□□□ -0.58
NOD1-208ENST00000489614 ZNF589Q86UQ0 364 aaPredicted RBP11.45□□□□□ -0.58
NOD1-208ENST00000489614 FAM84BQ96KN1 310 aaPredicted RBP11.45□□□□□ -0.58
NOD1-208ENST00000489614 PIH1D3Q9NQM4 214 aaKnown RBP11.45□□□□□ -0.58
NOD1-208ENST00000489614 CCDC171Q6TFL3 1326 aa11.45□□□□□ -0.58
NOD1-208ENST00000489614 SNAP23O00161 211 aa11.45□□□□□ -0.58
NOD1-208ENST00000489614 CCDC158Q5M9N0 1113 aa11.45□□□□□ -0.58
NOD1-208ENST00000489614 CCDC24Q8N4L8 307 aa11.45□□□□□ -0.58
NOD1-208ENST00000489614 STK32BQ9NY57 414 aa11.45□□□□□ -0.58
NOD1-208ENST00000489614 ZKSCAN7Q9P0L1 754 aaPredicted RBP11.45□□□□□ -0.58
NOD1-208ENST00000489614 PALD1Q9ULE6 856 aa11.45□□□□□ -0.58
NOD1-208ENST00000489614 SEMA3EO15041 775 aa11.44□□□□□ -0.58
NOD1-208ENST00000489614 KLRK1P26718 216 aa11.44□□□□□ -0.58
NOD1-208ENST00000489614 TDO2P48775 406 aa11.44□□□□□ -0.58
NOD1-208ENST00000489614 CTR9Q6PD62 1173 aa11.44□□□□□ -0.58
NOD1-208ENST00000489614 FBXO38Q6PIJ6 1188 aa11.44□□□□□ -0.58
NOD1-208ENST00000489614 HELBQ8NG08 1087 aaPredicted RBP11.44□□□□□ -0.58
NOD1-208ENST00000489614 NEUROD6Q96NK8 337 aa11.44□□□□□ -0.58
NOD1-208ENST00000489614 GDPD2Q9HCC8 539 aa11.44□□□□□ -0.58
NOD1-208ENST00000489614 GOLGB1Q14789 3259 aaKnown RBP11.44□□□□□ -0.58
NOD1-208ENST00000489614 BBOX1O75936 387 aa11.44□□□□□ -0.58
NOD1-208ENST00000489614 MMP10P09238 476 aa11.44□□□□□ -0.58
NOD1-208ENST00000489614 PI16Q6UXB8 463 aa11.44□□□□□ -0.58
NOD1-208ENST00000489614 DDX46Q7L014 1031 aaKnown RBP11.44□□□□□ -0.58
NOD1-208ENST00000489614 ZNF397Q8NF99 534 aaPredicted RBP11.44□□□□□ -0.58
NOD1-208ENST00000489614 C7orf43Q8WVR3 580 aa11.44□□□□□ -0.58
NOD1-208ENST00000489614 RBM17Q96I25 401 aaKnown RBP11.44□□□□□ -0.58
NOD1-208ENST00000489614 SGIP1Q9BQI5 828 aa11.44□□□□□ -0.58
NOD1-208ENST00000489614 PDGFDQ9GZP0 370 aaPredicted RBP11.44□□□□□ -0.58
NOD1-208ENST00000489614 LEMD3Q9Y2U8 911 aa11.44□□□□□ -0.58
NOD1-208ENST00000489614 MAST3O60307 1309 aa11.44□□□□□ -0.58
NOD1-208ENST00000489614 ZMYM6O95789 1325 aa11.44□□□□□ -0.58
NOD1-208ENST00000489614 GREB1LQ9C091 1923 aaPredicted RBP11.44□□□□□ -0.58
NOD1-208ENST00000489614 ADD2P35612 726 aa11.44□□□□□ -0.58
NOD1-208ENST00000489614 TTC39AQ5SRH9 613 aa11.44□□□□□ -0.58
NOD1-208ENST00000489614 STYK1Q6J9G0 422 aa11.44□□□□□ -0.58
NOD1-208ENST00000489614 SLC16A10Q8TF71 515 aa11.44□□□□□ -0.58
NOD1-208ENST00000489614 COL4A5P29400 1685 aa11.43□□□□□ -0.58
NOD1-208ENST00000489614 RNF113AO15541 343 aaKnown RBP11.43□□□□□ -0.58
NOD1-208ENST00000489614 SATB1Q01826 763 aa11.43□□□□□ -0.58
NOD1-208ENST00000489614 SP8Q8IXZ3 490 aa11.43□□□□□ -0.58
NOD1-208ENST00000489614 ZNF384Q8TF68 577 aa11.43□□□□□ -0.58
NOD1-208ENST00000489614 SUFUQ9UMX1 484 aa11.43□□□□□ -0.58
NOD1-208ENST00000489614 XDHP47989 1333 aa11.43□□□□□ -0.58
Retrieved 100 of 20,778 RNA–protein pairs in 13.2 ms