RNA–Protein interactions for RNA: ENST00000488255.1

VPS8-224, Transcript of VPS8, CORVET complex subunit, humanhuman

TSL 2

Gene VPS8, Length 564 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS8-224ENST00000488255 MAP1SQ66K74 1059 aaPredicted RBP8.43□□□□□ -1.06
VPS8-224ENST00000488255 CDPF1Q6NVV7 123 aa8.43□□□□□ -1.06
VPS8-224ENST00000488255 C2CD4AQ8NCU7 369 aaPredicted RBP8.43□□□□□ -1.06
VPS8-224ENST00000488255 FRMD6Q96NE9 622 aa8.43□□□□□ -1.06
VPS8-224ENST00000488255 WDR18Q9BV38 432 aa8.43□□□□□ -1.06
VPS8-224ENST00000488255 CEP44Q9C0F1 390 aa8.43□□□□□ -1.06
VPS8-224ENST00000488255 AK5Q9Y6K8 562 aa8.43□□□□□ -1.06
VPS8-224ENST00000488255 ENC1O14682 589 aa8.42□□□□□ -1.06
VPS8-224ENST00000488255 CELA3AP09093 270 aa8.42□□□□□ -1.06
VPS8-224ENST00000488255 NME2P22392 152 aa8.42□□□□□ -1.06
VPS8-224ENST00000488255 ZMYM1Q5SVZ6 1142 aa8.42□□□□□ -1.06
VPS8-224ENST00000488255 FBXO33Q7Z6M2 555 aa8.42□□□□□ -1.06
VPS8-224ENST00000488255 ACTL7BQ9Y614 415 aa8.42□□□□□ -1.06
VPS8-224ENST00000488255 NFKBIBQ15653 356 aa8.41□□□□□ -1.06
VPS8-224ENST00000488255 MPRIPQ6WCQ1 1025 aa8.41□□□□□ -1.06
VPS8-224ENST00000488255 CLEC10AQ8IUN9 316 aa8.41□□□□□ -1.06
VPS8-224ENST00000488255 GRIN3AQ8TCU5 1115 aa8.41□□□□□ -1.06
VPS8-224ENST00000488255 ACSBG1Q96GR2 724 aa8.41□□□□□ -1.06
VPS8-224ENST00000488255 PPP1R9AQ9ULJ8 1098 aa8.41□□□□□ -1.06
VPS8-224ENST00000488255 PPM1HQ9ULR3 514 aa8.41□□□□□ -1.06
VPS8-224ENST00000488255 ZNF862O60290 1169 aa8.4□□□□□ -1.06
VPS8-224ENST00000488255 SLFN14P0C7P3 912 aa8.4□□□□□ -1.06
VPS8-224ENST00000488255 ASPAP45381 313 aa8.4□□□□□ -1.06
VPS8-224ENST00000488255 PDZD3Q86UT5 571 aa8.4□□□□□ -1.06
VPS8-224ENST00000488255 FAM83CQ9BQN1 747 aa8.4□□□□□ -1.06
VPS8-224ENST00000488255 LGR6Q9HBX8 967 aa8.4□□□□□ -1.06
VPS8-224ENST00000488255 HIF3AQ9Y2N7 669 aa8.4□□□□□ -1.06
VPS8-224ENST00000488255 FAM95CA0A1B0GW59 222 aa8.39□□□□□ -1.07
VPS8-224ENST00000488255 SCO2A0A1W2PP80 73 aa8.39□□□□□ -1.07
VPS8-224ENST00000488255 IGLV1-40P01703 118 aa8.39□□□□□ -1.07
VPS8-224ENST00000488255 ERCC3P19447 782 aa8.39□□□□□ -1.07
VPS8-224ENST00000488255 MEI1Q5TIA1 1274 aa8.39□□□□□ -1.07
VPS8-224ENST00000488255 FBXL6Q8N531 539 aa8.39□□□□□ -1.07
VPS8-224ENST00000488255 BCL2L13Q9BXK5 485 aa8.39□□□□□ -1.07
VPS8-224ENST00000488255 EMILIN2Q9BXX0 1053 aa8.39□□□□□ -1.07
VPS8-224ENST00000488255 FAM105AQ9NUU6 356 aa8.39□□□□□ -1.07
VPS8-224ENST00000488255 SAMM50Q9Y512 469 aa8.39□□□□□ -1.07
VPS8-224ENST00000488255 NFICP08651 508 aa8.38□□□□□ -1.07
VPS8-224ENST00000488255 BMP6P22004 513 aa8.38□□□□□ -1.07
VPS8-224ENST00000488255 DAB2P98082 770 aa8.38□□□□□ -1.07
VPS8-224ENST00000488255 TRIM26Q12899 539 aaPredicted RBP8.38□□□□□ -1.07
VPS8-224ENST00000488255 CCDC85BQ15834 202 aaPredicted RBP8.38□□□□□ -1.07
VPS8-224ENST00000488255 MAP3K11Q16584 847 aa8.38□□□□□ -1.07
VPS8-224ENST00000488255 PCNX4Q63HM2 1172 aa8.38□□□□□ -1.07
VPS8-224ENST00000488255 GPBAR1Q8TDU6 330 aa8.38□□□□□ -1.07
VPS8-224ENST00000488255 GIPC2Q8TF65 315 aa8.38□□□□□ -1.07
VPS8-224ENST00000488255 MFSD14AQ96MC6 490 aa8.38□□□□□ -1.07
VPS8-224ENST00000488255 YIPF2Q9BWQ6 316 aa8.38□□□□□ -1.07
VPS8-224ENST00000488255 MRS2Q9HD23 443 aa8.38□□□□□ -1.07
VPS8-224ENST00000488255 HNRNPUQ00839 825 aaKnown RBP eCLIP8.37□□□□□ -1.07
VPS8-224ENST00000488255 ID3Q02535 119 aa8.37□□□□□ -1.07
VPS8-224ENST00000488255 NFIAQ12857 509 aa8.37□□□□□ -1.07
VPS8-224ENST00000488255 RASIP1Q5U651 963 aa8.37□□□□□ -1.07
VPS8-224ENST00000488255 RNF43Q68DV7 783 aa8.37□□□□□ -1.07
VPS8-224ENST00000488255 PAOXQ6QHF9 649 aa8.37□□□□□ -1.07
VPS8-224ENST00000488255 KRT82Q9NSB4 513 aa8.37□□□□□ -1.07
VPS8-224ENST00000488255 VTI1BQ9UEU0 232 aa8.37□□□□□ -1.07
VPS8-224ENST00000488255 DAGLAQ9Y4D2 1042 aa8.37□□□□□ -1.07
VPS8-224ENST00000488255 CSADQ9Y600 493 aa8.37□□□□□ -1.07
VPS8-224ENST00000488255 TMPRSS2O15393 492 aa8.36□□□□□ -1.07
VPS8-224ENST00000488255 GSC2O15499 205 aa8.36□□□□□ -1.07
VPS8-224ENST00000488255 RNGTTO60942 597 aaKnown RBP8.36□□□□□ -1.07
VPS8-224ENST00000488255 MFAP1P55081 439 aaKnown RBP8.36□□□□□ -1.07
VPS8-224ENST00000488255 KIF4BQ2VIQ3 1234 aa8.36□□□□□ -1.07
VPS8-224ENST00000488255 LLGL2Q6P1M3 1020 aa8.36□□□□□ -1.07
VPS8-224ENST00000488255 PIDD1Q9HB75 910 aa8.36□□□□□ -1.07
VPS8-224ENST00000488255 SORBS3O60504 671 aa8.35□□□□□ -1.07
VPS8-224ENST00000488255 ZNF252P-AS1Q0IIN9 211 aa8.35□□□□□ -1.07
VPS8-224ENST00000488255 SV2BQ7L1I2 683 aa8.35□□□□□ -1.07
VPS8-224ENST00000488255 TMC4Q7Z404 712 aa8.35□□□□□ -1.07
VPS8-224ENST00000488255 FANCD2OSQ96PS1 177 aa8.35□□□□□ -1.07
VPS8-224ENST00000488255 DBNDD2Q9BQY9 259 aa8.35□□□□□ -1.07
VPS8-224ENST00000488255 CRIM1Q9NZV1 1036 aa8.35□□□□□ -1.07
VPS8-224ENST00000488255 DCDC2CA8MYV0 355 aa8.34□□□□□ -1.07
VPS8-224ENST00000488255 WDR64B1ANS9 1081 aa8.34□□□□□ -1.07
VPS8-224ENST00000488255 HCLS1P14317 486 aaPredicted RBP8.34□□□□□ -1.07
VPS8-224ENST00000488255 LRRC14Q15048 493 aa8.34□□□□□ -1.07
VPS8-224ENST00000488255 TTBK2Q6IQ55 1244 aa8.34□□□□□ -1.07
VPS8-224ENST00000488255 SHISA5Q8N114 240 aa8.34□□□□□ -1.07
VPS8-224ENST00000488255 SHKBP1Q8TBC3 707 aa8.34□□□□□ -1.07
VPS8-224ENST00000488255 ATXN3LQ9H3M9 355 aa8.34□□□□□ -1.07
VPS8-224ENST00000488255 SEMA6CQ9H3T2 930 aa8.34□□□□□ -1.07
VPS8-224ENST00000488255 PICK1Q9NRD5 415 aa8.34□□□□□ -1.07
VPS8-224ENST00000488255 KIR2DP1A0A0G2JNF4 349 aaPredicted RBP8.33□□□□□ -1.08
VPS8-224ENST00000488255 TGFB1P01137 390 aa8.33□□□□□ -1.08
VPS8-224ENST00000488255 CTSHP09668 335 aa8.33□□□□□ -1.08
VPS8-224ENST00000488255 LMNB1P20700 586 aa8.33□□□□□ -1.08
VPS8-224ENST00000488255 MAP7Q14244 749 aa8.33□□□□□ -1.08
VPS8-224ENST00000488255 TTLL4Q14679 1199 aa8.33□□□□□ -1.08
VPS8-224ENST00000488255 ZNF326Q5BKZ1 582 aaKnown RBP8.33□□□□□ -1.08
VPS8-224ENST00000488255 TBC1D32Q96NH3 1257 aa8.33□□□□□ -1.08
VPS8-224ENST00000488255 ACSS3Q9H6R3 686 aa8.33□□□□□ -1.08
VPS8-224ENST00000488255 SSU72Q9NP77 194 aaKnown RBP8.33□□□□□ -1.08
VPS8-224ENST00000488255 DISC1Q9NRI5 854 aa8.33□□□□□ -1.08
VPS8-224ENST00000488255 PCDHA4Q9UN74 947 aa8.33□□□□□ -1.08
VPS8-224ENST00000488255 F6X3S4 739 aa8.32□□□□□ -1.08
VPS8-224ENST00000488255 DYNC1LI2O43237 492 aaPredicted RBP8.32□□□□□ -1.08
VPS8-224ENST00000488255 SSTR4P31391 388 aa8.32□□□□□ -1.08
VPS8-224ENST00000488255 TAF1CQ15572 869 aaPredicted RBP8.32□□□□□ -1.08
VPS8-224ENST00000488255 C12orf40Q86WS4 652 aa8.32□□□□□ -1.08
Retrieved 100 of 20,778 RNA–protein pairs in 30.2 ms