RNA–Protein interactions for RNA: ENST00000485921.5

ABCF3-216, Transcript of ATP binding cassette subfamily F member 3, humanhuman

TSL 2

Gene ABCF3, Length 813 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ABCF3-216ENST00000485921 DDX24Q9GZR7 859 aaKnown RBP eCLIP28.66■■■□□ 2.18
ABCF3-216ENST00000485921 VEZTQ9HBM0 779 aa28.66■■■□□ 2.18
ABCF3-216ENST00000485921 SCAF8Q9UPN6 1271 aaKnown RBP28.66■■■□□ 2.18
ABCF3-216ENST00000485921 DOCK2Q92608 1830 aa28.66■■■□□ 2.18
ABCF3-216ENST00000485921 TMED8Q6PL24 325 aaPredicted RBP28.65■■■□□ 2.18
ABCF3-216ENST00000485921 USP40Q9NVE5 1235 aa28.65■■■□□ 2.18
ABCF3-216ENST00000485921 MAST2Q6P0Q8 1798 aa28.65■■■□□ 2.18
ABCF3-216ENST00000485921 POLR2AP24928 1970 aaKnown RBP28.64■■■□□ 2.18
ABCF3-216ENST00000485921 ADM5C9JUS6 153 aa28.64■■■□□ 2.18
ABCF3-216ENST00000485921 PDE6AP16499 860 aa28.64■■■□□ 2.18
ABCF3-216ENST00000485921 ADGRA1Q86SQ6 560 aa28.64■■■□□ 2.18
ABCF3-216ENST00000485921 KBTBD3Q8NAB2 608 aa28.64■■■□□ 2.18
ABCF3-216ENST00000485921 TMOD2Q9NZR1 351 aa28.64■■■□□ 2.18
ABCF3-216ENST00000485921 NOL10Q9BSC4 688 aaKnown RBP28.63■■■□□ 2.17
ABCF3-216ENST00000485921 ECM29Q5VYK3 1845 aa28.62■■■□□ 2.17
ABCF3-216ENST00000485921 TRAF5O00463 557 aa28.62■■■□□ 2.17
ABCF3-216ENST00000485921 CACNB3P54284 484 aa28.62■■■□□ 2.17
ABCF3-216ENST00000485921 TCP10L2B9ZVM9 353 aa28.61■■■□□ 2.17
ABCF3-216ENST00000485921 BAG3O95817 575 aa28.61■■■□□ 2.17
ABCF3-216ENST00000485921 ADD2P35612 726 aa28.61■■■□□ 2.17
ABCF3-216ENST00000485921 C1QTNF8P60827 252 aa28.61■■■□□ 2.17
ABCF3-216ENST00000485921 ZSCAN25Q6NSZ9 544 aa28.61■■■□□ 2.17
ABCF3-216ENST00000485921 DLK2Q6UY11 383 aa28.61■■■□□ 2.17
ABCF3-216ENST00000485921 AATFQ9NY61 560 aaKnown RBP eCLIP28.61■■■□□ 2.17
ABCF3-216ENST00000485921 ZNF532Q9HCE3 1301 aa28.61■■■□□ 2.17
ABCF3-216ENST00000485921 TCRBV5S4A2TA0A5A2 114 aa28.6■■■□□ 2.17
ABCF3-216ENST00000485921 PPP4CP60510 307 aa28.6■■■□□ 2.17
ABCF3-216ENST00000485921 FMR1Q06787 632 aaKnown RBP eCLIP28.6■■■□□ 2.17
ABCF3-216ENST00000485921 EVI5LQ96CN4 794 aa28.6■■■□□ 2.17
ABCF3-216ENST00000485921 DEFB129Q9H1M3 183 aa28.6■■■□□ 2.17
ABCF3-216ENST00000485921 PASKQ96RG2 1323 aa28.6■■■□□ 2.17
ABCF3-216ENST00000485921 RHBDL3P58872 404 aa28.59■■■□□ 2.17
ABCF3-216ENST00000485921 TNFAIP1Q13829 316 aa28.59■■■□□ 2.17
ABCF3-216ENST00000485921 SLFNL1Q499Z3 407 aa28.59■■■□□ 2.17
ABCF3-216ENST00000485921 FKBP1CQ5VVH2 108 aa28.59■■■□□ 2.17
ABCF3-216ENST00000485921 MIGA1Q8NAN2 632 aa28.59■■■□□ 2.17
ABCF3-216ENST00000485921 FSD1Q9BTV5 496 aa28.59■■■□□ 2.17
ABCF3-216ENST00000485921 TNNI2P48788 182 aa28.58■■■□□ 2.17
ABCF3-216ENST00000485921 RASA3Q14644 834 aa28.58■■■□□ 2.17
ABCF3-216ENST00000485921 UBE3CQ15386 1083 aa28.58■■■□□ 2.17
ABCF3-216ENST00000485921 TRIM6-TRIM34B2RNG4 842 aa28.57■■■□□ 2.16
ABCF3-216ENST00000485921 CHGBP05060 677 aa28.57■■■□□ 2.16
ABCF3-216ENST00000485921 DYNLL1P63167 89 aaKnown RBP28.57■■■□□ 2.16
ABCF3-216ENST00000485921 SH3RF3Q8TEJ3 882 aaPredicted RBP28.57■■■□□ 2.16
ABCF3-216ENST00000485921 CDCA5Q96FF9 252 aa28.57■■■□□ 2.16
ABCF3-216ENST00000485921 RNF113AO15541 343 aaKnown RBP28.56■■■□□ 2.16
ABCF3-216ENST00000485921 PLCG2P16885 1265 aa28.56■■■□□ 2.16
ABCF3-216ENST00000485921 NFIAQ12857 509 aa28.56■■■□□ 2.16
ABCF3-216ENST00000485921 LRRFIP1Q32MZ4 808 aaKnown RBP28.56■■■□□ 2.16
ABCF3-216ENST00000485921 PRAMEF18Q5VWM3 479 aa28.56■■■□□ 2.16
ABCF3-216ENST00000485921 SKAP1Q86WV1 359 aa28.56■■■□□ 2.16
ABCF3-216ENST00000485921 PPP2R3BQ9Y5P8 575 aa28.56■■■□□ 2.16
ABCF3-216ENST00000485921 MAGEB6P1A0A0J9YX57 407 aa28.55■■■□□ 2.16
ABCF3-216ENST00000485921 ZFYP08048 801 aaPredicted RBP28.55■■■□□ 2.16
ABCF3-216ENST00000485921 TTC22Q5TAA0 569 aa28.55■■■□□ 2.16
ABCF3-216ENST00000485921 FAM83AQ86UY5 434 aa28.55■■■□□ 2.16
ABCF3-216ENST00000485921 TEX11Q8IYF3 940 aa28.55■■■□□ 2.16
ABCF3-216ENST00000485921 RILPL2Q969X0 211 aa28.55■■■□□ 2.16
ABCF3-216ENST00000485921 IDI2Q9BXS1 227 aa28.55■■■□□ 2.16
ABCF3-216ENST00000485921 CNTNAP1P78357 1384 aa28.54■■■□□ 2.16
ABCF3-216ENST00000485921 WDHD1O75717 1129 aaPredicted RBP28.54■■■□□ 2.16
ABCF3-216ENST00000485921 CERS3Q8IU89 383 aa28.54■■■□□ 2.16
ABCF3-216ENST00000485921 ZNF408Q9H9D4 720 aa28.54■■■□□ 2.16
ABCF3-216ENST00000485921 FAM198AQ9UFP1 575 aa28.54■■■□□ 2.16
ABCF3-216ENST00000485921 RGS3P49796 1198 aa28.53■■■□□ 2.16
ABCF3-216ENST00000485921 TCP10Q12799 353 aa28.53■■■□□ 2.16
ABCF3-216ENST00000485921 RIOK1Q9BRS2 568 aaKnown RBP28.53■■■□□ 2.16
ABCF3-216ENST00000485921 TMEM39BQ9GZU3 492 aa28.53■■■□□ 2.16
ABCF3-216ENST00000485921 MYH7P12883 1935 aa28.53■■■□□ 2.16
ABCF3-216ENST00000485921 CELF2O95319 508 aaKnown RBP28.52■■■□□ 2.16
ABCF3-216ENST00000485921 PICALMQ13492 652 aa28.52■■■□□ 2.16
ABCF3-216ENST00000485921 FAM151AQ8WW52 585 aa28.52■■■□□ 2.16
ABCF3-216ENST00000485921 RFX7Q2KHR2 1363 aa28.51■■■□□ 2.16
ABCF3-216ENST00000485921 ENTPD3O75355 529 aa28.51■■■□□ 2.15
ABCF3-216ENST00000485921 GSPT1P15170 499 aaKnown RBP28.51■■■□□ 2.15
ABCF3-216ENST00000485921 APLP1P51693 650 aa28.51■■■□□ 2.15
ABCF3-216ENST00000485921 CST9Q5W186 159 aa28.51■■■□□ 2.15
ABCF3-216ENST00000485921 APPBP2Q92624 585 aa28.51■■■□□ 2.15
ABCF3-216ENST00000485921 DDX4Q9NQI0 724 aaKnown RBP28.51■■■□□ 2.15
ABCF3-216ENST00000485921 ZFPM1Q8IX07 1006 aa28.5■■■□□ 2.15
ABCF3-216ENST00000485921 TEPSINQ96N21 525 aa28.5■■■□□ 2.15
ABCF3-216ENST00000485921 PUS7LQ9H0K6 701 aaKnown RBP28.5■■■□□ 2.15
ABCF3-216ENST00000485921 NPM3O75607 178 aaKnown RBP28.49■■■□□ 2.15
ABCF3-216ENST00000485921 MBD4O95243 580 aa28.49■■■□□ 2.15
ABCF3-216ENST00000485921 SUPT20HL1Q3ZLR7 823 aa28.49■■■□□ 2.15
ABCF3-216ENST00000485921 NBPF12Q5TAG4 269 aaPredicted RBP28.49■■■□□ 2.15
ABCF3-216ENST00000485921 TICAM2Q86XR7 235 aa28.49■■■□□ 2.15
ABCF3-216ENST00000485921 LCORLQ8N3X6 602 aa28.49■■■□□ 2.15
ABCF3-216ENST00000485921 TGFBRAP1Q8WUH2 860 aa28.49■■■□□ 2.15
ABCF3-216ENST00000485921 OSBP2Q969R2 916 aa28.49■■■□□ 2.15
ABCF3-216ENST00000485921 ARMT1Q9H993 441 aa28.49■■■□□ 2.15
ABCF3-216ENST00000485921 NF2P35240 595 aa28.48■■■□□ 2.15
ABCF3-216ENST00000485921 CDAN1Q8IWY9 1227 aa28.48■■■□□ 2.15
ABCF3-216ENST00000485921 AIDAQ96BJ3 306 aa28.48■■■□□ 2.15
ABCF3-216ENST00000485921 TMEM88BA6NKF7 163 aa28.47■■■□□ 2.15
ABCF3-216ENST00000485921 SDSP20132 328 aa28.47■■■□□ 2.15
ABCF3-216ENST00000485921 ZMYM1Q5SVZ6 1142 aa28.47■■■□□ 2.15
ABCF3-216ENST00000485921 CRNKL1Q9BZJ0 848 aaKnown RBP28.47■■■□□ 2.15
ABCF3-216ENST00000485921 TRPM7Q96QT4 1865 aa28.46■■■□□ 2.15
ABCF3-216ENST00000485921 HSPA6P17066 643 aa28.46■■■□□ 2.15
Retrieved 100 of 20,778 RNA–protein pairs in 29.6 ms