RNA–Protein interactions for RNA: ENST00000485705.5

RPUSD3-217, Transcript of RNA pseudouridylate synthase domain containing 3, humanhuman

TSL 3

Gene RPUSD3, Length 630 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPUSD3-217ENST00000485705 CEP350Q5VT06 3117 aa18.76■□□□□ 0.59
RPUSD3-217ENST00000485705 GPR75-ASB3A0A0A6YYF3 556 aa18.76■□□□□ 0.59
RPUSD3-217ENST00000485705 TCRBV5S4A2TA0A5A2 114 aa18.76■□□□□ 0.59
RPUSD3-217ENST00000485705 ADD2P35612 726 aa18.76■□□□□ 0.59
RPUSD3-217ENST00000485705 CACNB3P54284 484 aa18.76■□□□□ 0.59
RPUSD3-217ENST00000485705 SPDYE2Q495Y8 402 aa18.76■□□□□ 0.59
RPUSD3-217ENST00000485705 CNTROBQ8N137 903 aa18.76■□□□□ 0.59
RPUSD3-217ENST00000485705 DCPSQ96C86 337 aaKnown RBP18.76■□□□□ 0.59
RPUSD3-217ENST00000485705 GLIS2Q9BZE0 524 aaPredicted RBP18.76■□□□□ 0.59
RPUSD3-217ENST00000485705 CDK5RAP2Q96SN8 1893 aa18.75■□□□□ 0.59
RPUSD3-217ENST00000485705 TRIM6-TRIM34B2RNG4 842 aa18.75■□□□□ 0.59
RPUSD3-217ENST00000485705 ADM5C9JUS6 153 aa18.75■□□□□ 0.59
RPUSD3-217ENST00000485705 MYO1BO43795 1136 aa18.75■□□□□ 0.59
RPUSD3-217ENST00000485705 IGSF3O75054 1194 aa18.75■□□□□ 0.59
RPUSD3-217ENST00000485705 GSPT1P15170 499 aaKnown RBP18.75■□□□□ 0.59
RPUSD3-217ENST00000485705 DYNLL1P63167 89 aaKnown RBP18.75■□□□□ 0.59
RPUSD3-217ENST00000485705 FMR1Q06787 632 aaKnown RBP eCLIP18.75■□□□□ 0.59
RPUSD3-217ENST00000485705 TTC22Q5TAA0 569 aa18.75■□□□□ 0.59
RPUSD3-217ENST00000485705 USP48Q86UV5 1035 aa18.75■□□□□ 0.59
RPUSD3-217ENST00000485705 MIGA1Q8NAN2 632 aa18.75■□□□□ 0.59
RPUSD3-217ENST00000485705 SMC1BQ8NDV3 1235 aa18.75■□□□□ 0.59
RPUSD3-217ENST00000485705 DDX24Q9GZR7 859 aaKnown RBP eCLIP18.75■□□□□ 0.59
RPUSD3-217ENST00000485705 VEZTQ9HBM0 779 aa18.75■□□□□ 0.59
RPUSD3-217ENST00000485705 USP40Q9NVE5 1235 aa18.75■□□□□ 0.59
RPUSD3-217ENST00000485705 AATFQ9NY61 560 aaKnown RBP eCLIP18.75■□□□□ 0.59
RPUSD3-217ENST00000485705 TRAF5O00463 557 aa18.74■□□□□ 0.59
RPUSD3-217ENST00000485705 RGS3P49796 1198 aa18.74■□□□□ 0.59
RPUSD3-217ENST00000485705 RHBDL3P58872 404 aa18.74■□□□□ 0.59
RPUSD3-217ENST00000485705 KRT26Q7Z3Y9 468 aa18.74■□□□□ 0.59
RPUSD3-217ENST00000485705 RILPL2Q969X0 211 aa18.74■□□□□ 0.59
RPUSD3-217ENST00000485705 EVI5LQ96CN4 794 aa18.74■□□□□ 0.59
RPUSD3-217ENST00000485705 FSD1Q9BTV5 496 aa18.74■□□□□ 0.59
RPUSD3-217ENST00000485705 PITPNM2Q9BZ72 1349 aa18.74■□□□□ 0.59
RPUSD3-217ENST00000485705 TCP10L2B9ZVM9 353 aa18.73■□□□□ 0.59
RPUSD3-217ENST00000485705 ITGBL1O95965 494 aaPredicted RBP18.73■□□□□ 0.59
RPUSD3-217ENST00000485705 RNF113AO15541 343 aaKnown RBP18.72■□□□□ 0.59
RPUSD3-217ENST00000485705 PPP4CP60510 307 aa18.72■□□□□ 0.59
RPUSD3-217ENST00000485705 NFIAQ12857 509 aa18.72■□□□□ 0.59
RPUSD3-217ENST00000485705 UBE3CQ15386 1083 aa18.72■□□□□ 0.59
RPUSD3-217ENST00000485705 PRAMEF18Q5VWM3 479 aa18.72■□□□□ 0.59
RPUSD3-217ENST00000485705 CDC37L1Q7L3B6 337 aa18.72■□□□□ 0.59
RPUSD3-217ENST00000485705 APOBEC3FQ8IUX4 373 aaKnown RBP18.72■□□□□ 0.59
RPUSD3-217ENST00000485705 SULF1Q8IWU6 871 aa18.72■□□□□ 0.59
RPUSD3-217ENST00000485705 SH3RF3Q8TEJ3 882 aaPredicted RBP18.72■□□□□ 0.59
RPUSD3-217ENST00000485705 ZSCAN25Q6NSZ9 544 aa18.71■□□□□ 0.59
RPUSD3-217ENST00000485705 RIOK1Q9BRS2 568 aaKnown RBP18.71■□□□□ 0.59
RPUSD3-217ENST00000485705 NOL10Q9BSC4 688 aaKnown RBP18.71■□□□□ 0.59
RPUSD3-217ENST00000485705 TRPM7Q96QT4 1865 aa18.71■□□□□ 0.59
RPUSD3-217ENST00000485705 CNTNAP1P78357 1384 aa18.7■□□□□ 0.58
RPUSD3-217ENST00000485705 MAGEB6P1A0A0J9YX57 407 aa18.7■□□□□ 0.58
RPUSD3-217ENST00000485705 WDHD1O75717 1129 aaPredicted RBP18.7■□□□□ 0.58
RPUSD3-217ENST00000485705 BAG3O95817 575 aa18.7■□□□□ 0.58
RPUSD3-217ENST00000485705 SDSP20132 328 aa18.7■□□□□ 0.58
RPUSD3-217ENST00000485705 FSTL1Q12841 308 aa18.7■□□□□ 0.58
RPUSD3-217ENST00000485705 RASA3Q14644 834 aa18.7■□□□□ 0.58
RPUSD3-217ENST00000485705 TMED8Q6PL24 325 aaPredicted RBP18.7■□□□□ 0.58
RPUSD3-217ENST00000485705 OSBP2Q969R2 916 aa18.7■□□□□ 0.58
RPUSD3-217ENST00000485705 PUS7LQ9H0K6 701 aaKnown RBP18.7■□□□□ 0.58
RPUSD3-217ENST00000485705 DEFB129Q9H1M3 183 aa18.7■□□□□ 0.58
RPUSD3-217ENST00000485705 DDX4Q9NQI0 724 aaKnown RBP18.7■□□□□ 0.58
RPUSD3-217ENST00000485705 TMOD2Q9NZR1 351 aa18.7■□□□□ 0.58
RPUSD3-217ENST00000485705 FAM198AQ9UFP1 575 aa18.7■□□□□ 0.58
RPUSD3-217ENST00000485705 GTF3C3Q9Y5Q9 886 aa18.7■□□□□ 0.58
RPUSD3-217ENST00000485705 FOCADQ5VW36 1801 aa18.7■□□□□ 0.58
RPUSD3-217ENST00000485705 RFX7Q2KHR2 1363 aa18.69■□□□□ 0.58
RPUSD3-217ENST00000485705 ZFYP08048 801 aaPredicted RBP18.69■□□□□ 0.58
RPUSD3-217ENST00000485705 TCP10Q12799 353 aa18.69■□□□□ 0.58
RPUSD3-217ENST00000485705 CDAN1Q8IWY9 1227 aa18.69■□□□□ 0.58
RPUSD3-217ENST00000485705 ZFPM1Q8IX07 1006 aa18.69■□□□□ 0.58
RPUSD3-217ENST00000485705 TEX11Q8IYF3 940 aa18.69■□□□□ 0.58
RPUSD3-217ENST00000485705 LCORLQ8N3X6 602 aa18.69■□□□□ 0.58
RPUSD3-217ENST00000485705 SEC62Q99442 399 aaKnown RBP18.69■□□□□ 0.58
RPUSD3-217ENST00000485705 ARMT1Q9H993 441 aa18.69■□□□□ 0.58
RPUSD3-217ENST00000485705 PASKQ96RG2 1323 aa18.69■□□□□ 0.58
RPUSD3-217ENST00000485705 M0R2C6 588 aa18.68■□□□□ 0.58
RPUSD3-217ENST00000485705 MBD4O95243 580 aa18.68■□□□□ 0.58
RPUSD3-217ENST00000485705 C1QTNF8P60827 252 aa18.68■□□□□ 0.58
RPUSD3-217ENST00000485705 PICALMQ13492 652 aa18.68■□□□□ 0.58
RPUSD3-217ENST00000485705 ZMYM1Q5SVZ6 1142 aa18.68■□□□□ 0.58
RPUSD3-217ENST00000485705 FKBP1CQ5VVH2 108 aa18.68■□□□□ 0.58
RPUSD3-217ENST00000485705 APPBP2Q92624 585 aa18.68■□□□□ 0.58
RPUSD3-217ENST00000485705 IDI2Q9BXS1 227 aa18.68■□□□□ 0.58
RPUSD3-217ENST00000485705 TMEM39BQ9GZU3 492 aa18.68■□□□□ 0.58
RPUSD3-217ENST00000485705 PLCG2P16885 1265 aa18.67■□□□□ 0.58
RPUSD3-217ENST00000485705 LRRFIP1Q32MZ4 808 aaKnown RBP18.67■□□□□ 0.58
RPUSD3-217ENST00000485705 TGFBRAP1Q8WUH2 860 aa18.67■□□□□ 0.58
RPUSD3-217ENST00000485705 CDCA5Q96FF9 252 aa18.67■□□□□ 0.58
RPUSD3-217ENST00000485705 FAM227BQ96M60 508 aa18.67■□□□□ 0.58
RPUSD3-217ENST00000485705 MYH1P12882 1939 aa18.66■□□□□ 0.58
RPUSD3-217ENST00000485705 BAZ2AQ9UIF9 1905 aaKnown RBP18.66■□□□□ 0.58
RPUSD3-217ENST00000485705 TNNI2P48788 182 aa18.66■□□□□ 0.58
RPUSD3-217ENST00000485705 TNFAIP1Q13829 316 aa18.66■□□□□ 0.58
RPUSD3-217ENST00000485705 NBPF12Q5TAG4 269 aaPredicted RBP18.66■□□□□ 0.58
RPUSD3-217ENST00000485705 FAM83AQ86UY5 434 aa18.66■□□□□ 0.58
RPUSD3-217ENST00000485705 TEPSINQ96N21 525 aa18.66■□□□□ 0.58
RPUSD3-217ENST00000485705 ZNF408Q9H9D4 720 aa18.66■□□□□ 0.58
RPUSD3-217ENST00000485705 A0A0D9SFI3 127 aa18.65■□□□□ 0.58
RPUSD3-217ENST00000485705 PRKAB2O43741 272 aa18.65■□□□□ 0.58
RPUSD3-217ENST00000485705 NMIQ13287 307 aaPredicted RBP18.65■□□□□ 0.58
RPUSD3-217ENST00000485705 CCDC129Q6ZRS4 1044 aa18.65■□□□□ 0.58
Retrieved 100 of 20,778 RNA–protein pairs in 22.8 ms