RNA–Protein interactions for RNA: ENST00000485248.2

CAPN13-206, Transcript of calpain 13, humanhuman

TSL 3

Gene CAPN13, Length 710 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN13-206ENST00000485248 NEFMP07197 916 aa8.21□□□□□ -1.1
CAPN13-206ENST00000485248 PDE4AP27815 886 aa8.21□□□□□ -1.1
CAPN13-206ENST00000485248 CTGFP29279 349 aa8.21□□□□□ -1.1
CAPN13-206ENST00000485248 IRF5Q13568 498 aa8.21□□□□□ -1.1
CAPN13-206ENST00000485248 RASA3Q14644 834 aa8.21□□□□□ -1.1
CAPN13-206ENST00000485248 ANKRD23Q86SG2 305 aa8.21□□□□□ -1.1
CAPN13-206ENST00000485248 ANKRD18AQ8IVF6 992 aa8.21□□□□□ -1.1
CAPN13-206ENST00000485248 ZBTB38Q8NAP3 1195 aaPredicted RBP8.21□□□□□ -1.1
CAPN13-206ENST00000485248 USP38Q8NB14 1042 aa8.21□□□□□ -1.1
CAPN13-206ENST00000485248 HOOK2Q96ED9 719 aa8.21□□□□□ -1.1
CAPN13-206ENST00000485248 TTYH1Q9H313 450 aaPredicted RBP8.21□□□□□ -1.1
CAPN13-206ENST00000485248 MUC3AQ02505 3323 aa8.21□□□□□ -1.1
CAPN13-206ENST00000485248 EYSQ5T1H1 3165 aa8.21□□□□□ -1.1
CAPN13-206ENST00000485248 TTC28Q96AY4 2481 aa8.21□□□□□ -1.1
CAPN13-206ENST00000485248 F8W031 263 aaPredicted RBP8.2□□□□□ -1.1
CAPN13-206ENST00000485248 TRIM66O15016 1216 aa8.2□□□□□ -1.1
CAPN13-206ENST00000485248 HMGCRP04035 888 aa8.2□□□□□ -1.1
CAPN13-206ENST00000485248 PRKAR2BP31323 418 aa8.2□□□□□ -1.1
CAPN13-206ENST00000485248 PDE4DQ08499 809 aa8.2□□□□□ -1.1
CAPN13-206ENST00000485248 PPIL2Q13356 520 aa8.2□□□□□ -1.1
CAPN13-206ENST00000485248 CFAP100Q494V2 611 aa8.2□□□□□ -1.1
CAPN13-206ENST00000485248 CCDC152Q4G0S7 254 aa8.2□□□□□ -1.1
CAPN13-206ENST00000485248 RTL5Q5HYW3 569 aaPredicted RBP8.2□□□□□ -1.1
CAPN13-206ENST00000485248 PPP1R3FQ6ZSY5 799 aaPredicted RBP8.2□□□□□ -1.1
CAPN13-206ENST00000485248 POTEDQ86YR6 584 aa8.2□□□□□ -1.1
CAPN13-206ENST00000485248 ZNF428Q96B54 188 aa8.2□□□□□ -1.1
CAPN13-206ENST00000485248 FAM89AQ96GI7 184 aa8.2□□□□□ -1.1
CAPN13-206ENST00000485248 C1orf115Q9H7X2 142 aa8.2□□□□□ -1.1
CAPN13-206ENST00000485248 COL4A1P02462 1669 aa8.19□□□□□ -1.1
CAPN13-206ENST00000485248 CACNA1AO00555 2505 aa8.19□□□□□ -1.1
CAPN13-206ENST00000485248 IRS4O14654 1257 aaPredicted RBP8.19□□□□□ -1.1
CAPN13-206ENST00000485248 IRF6O14896 467 aa8.19□□□□□ -1.1
CAPN13-206ENST00000485248 EIF2S2P20042 333 aaKnown RBP8.19□□□□□ -1.1
CAPN13-206ENST00000485248 MLLT3P42568 568 aaPredicted RBP8.19□□□□□ -1.1
CAPN13-206ENST00000485248 KCNJ4P48050 445 aa8.19□□□□□ -1.1
CAPN13-206ENST00000485248 GTF2IP78347 998 aa8.19□□□□□ -1.1
CAPN13-206ENST00000485248 PDE3AQ14432 1141 aa8.19□□□□□ -1.1
CAPN13-206ENST00000485248 GOLGA6L2Q8N9W4 650 aaPredicted RBP8.19□□□□□ -1.1
CAPN13-206ENST00000485248 SMCR8Q8TEV9 937 aaPredicted RBP8.19□□□□□ -1.1
CAPN13-206ENST00000485248 DDX27Q96GQ7 796 aaKnown RBP8.19□□□□□ -1.1
CAPN13-206ENST00000485248 WRNIP1Q96S55 665 aa8.19□□□□□ -1.1
CAPN13-206ENST00000485248 THUMPD2Q9BTF0 503 aaKnown RBP8.19□□□□□ -1.1
CAPN13-206ENST00000485248 MIS18AQ9NYP9 233 aa8.19□□□□□ -1.1
CAPN13-206ENST00000485248 HTATSF1O43719 755 aaKnown RBP8.18□□□□□ -1.1
CAPN13-206ENST00000485248 CAMK2BQ13554 666 aa8.18□□□□□ -1.1
CAPN13-206ENST00000485248 DCTN1Q14203 1278 aa8.18□□□□□ -1.1
CAPN13-206ENST00000485248 SHHQ15465 462 aa8.18□□□□□ -1.1
CAPN13-206ENST00000485248 COPS6Q7L5N1 327 aa8.18□□□□□ -1.1
CAPN13-206ENST00000485248 RIC3Q7Z5B4 369 aa8.18□□□□□ -1.1
CAPN13-206ENST00000485248 DDX55Q8NHQ9 600 aaKnown RBP eCLIP8.18□□□□□ -1.1
CAPN13-206ENST00000485248 ZBED3Q96IU2 234 aaPredicted RBP8.18□□□□□ -1.1
CAPN13-206ENST00000485248 CDC5LQ99459 802 aaKnown RBP8.18□□□□□ -1.1
CAPN13-206ENST00000485248 PRDM5Q9NQX1 630 aaPredicted RBP8.18□□□□□ -1.1
CAPN13-206ENST00000485248 U2AF1L5P0DN76 240 aaPredicted RBP8.17□□□□□ -1.1
CAPN13-206ENST00000485248 U2AF1Q01081 240 aaKnown RBP eCLIP8.17□□□□□ -1.1
CAPN13-206ENST00000485248 PPATQ06203 517 aa8.17□□□□□ -1.1
CAPN13-206ENST00000485248 GRIN2CQ14957 1233 aa8.17□□□□□ -1.1
CAPN13-206ENST00000485248 CCDC85BQ15834 202 aaPredicted RBP8.17□□□□□ -1.1
CAPN13-206ENST00000485248 CSPP1Q1MSJ5 1256 aa8.17□□□□□ -1.1
CAPN13-206ENST00000485248 LRRC26Q2I0M4 334 aa8.17□□□□□ -1.1
CAPN13-206ENST00000485248 AKNAD1Q5T1N1 836 aa8.17□□□□□ -1.1
CAPN13-206ENST00000485248 ERICH6BQ5W0A0 696 aa8.17□□□□□ -1.1
CAPN13-206ENST00000485248 DCAF15Q66K64 600 aa8.17□□□□□ -1.1
CAPN13-206ENST00000485248 RNPC3Q96LT9 517 aaKnown RBP8.17□□□□□ -1.1
CAPN13-206ENST00000485248 NECAB3Q96P71 396 aaPredicted RBP8.17□□□□□ -1.1
CAPN13-206ENST00000485248 UIMC1Q96RL1 719 aa8.17□□□□□ -1.1
CAPN13-206ENST00000485248 EPHX3Q9H6B9 360 aa8.17□□□□□ -1.1
CAPN13-206ENST00000485248 SEC31BQ9NQW1 1179 aa8.17□□□□□ -1.1
CAPN13-206ENST00000485248 OGDHLQ9ULD0 1010 aa8.17□□□□□ -1.1
CAPN13-206ENST00000485248 PFASO15067 1338 aa8.17□□□□□ -1.1
CAPN13-206ENST00000485248 PRUNE2Q8WUY3 3088 aa8.16□□□□□ -1.1
CAPN13-206ENST00000485248 PITPNM1O00562 1244 aa8.16□□□□□ -1.1
CAPN13-206ENST00000485248 GPR37L1O60883 481 aa8.16□□□□□ -1.1
CAPN13-206ENST00000485248 IGFBP4P22692 258 aa8.16□□□□□ -1.1
CAPN13-206ENST00000485248 CCT4P50991 539 aaKnown RBP8.16□□□□□ -1.1
CAPN13-206ENST00000485248 EIF4A1P60842 406 aaKnown RBP8.16□□□□□ -1.1
CAPN13-206ENST00000485248 SKIV2LQ15477 1246 aaKnown RBP8.16□□□□□ -1.1
CAPN13-206ENST00000485248 CFAP53Q96M91 514 aa8.16□□□□□ -1.1
CAPN13-206ENST00000485248 TMOD2Q9NZR1 351 aa8.16□□□□□ -1.1
CAPN13-206ENST00000485248 NUDCQ9Y266 331 aa8.16□□□□□ -1.1
CAPN13-206ENST00000485248 MAST2Q6P0Q8 1798 aa8.15□□□□□ -1.1
CAPN13-206ENST00000485248 ARAP2Q8WZ64 1704 aa8.15□□□□□ -1.1
CAPN13-206ENST00000485248 FAM86C2PA6NEL3 165 aa8.15□□□□□ -1.1
CAPN13-206ENST00000485248 TCP10L2B9ZVM9 353 aa8.15□□□□□ -1.1
CAPN13-206ENST00000485248 SMIM22K7EJ46 135 aa8.15□□□□□ -1.1
CAPN13-206ENST00000485248 CYP2C8P10632 490 aa8.15□□□□□ -1.1
CAPN13-206ENST00000485248 BCRP11274 1271 aa8.15□□□□□ -1.1
CAPN13-206ENST00000485248 DNAJB2P25686 324 aa8.15□□□□□ -1.1
CAPN13-206ENST00000485248 XAGE3Q8WTP9 111 aa8.15□□□□□ -1.1
CAPN13-206ENST00000485248 PHACTR3Q96KR7 559 aa8.15□□□□□ -1.1
CAPN13-206ENST00000485248 PRMT6Q96LA8 375 aaPredicted RBP8.15□□□□□ -1.1
CAPN13-206ENST00000485248 CCDC85AQ96PX6 553 aaPredicted RBP8.15□□□□□ -1.1
CAPN13-206ENST00000485248 SENP6Q9GZR1 1112 aaPredicted RBP8.15□□□□□ -1.1
CAPN13-206ENST00000485248 ZNF576Q9H609 170 aa8.15□□□□□ -1.1
CAPN13-206ENST00000485248 SNCAIPQ9Y6H5 919 aa8.15□□□□□ -1.1
CAPN13-206ENST00000485248 ANXA1P04083 346 aa8.14□□□□□ -1.11
CAPN13-206ENST00000485248 NHLH1Q02575 133 aa8.14□□□□□ -1.11
CAPN13-206ENST00000485248 C9orf50Q5SZB4 431 aa8.14□□□□□ -1.11
CAPN13-206ENST00000485248 POTEEQ6S8J3 1075 aa8.14□□□□□ -1.11
CAPN13-206ENST00000485248 CCDC129Q6ZRS4 1044 aa8.14□□□□□ -1.11
Retrieved 100 of 20,778 RNA–protein pairs in 21 ms