RNA–Protein interactions for RNA: ENST00000483962.1

SNED1-210, Transcript of sushi, nidogen and EGF like domains 1, humanhuman

TSL 2

Gene SNED1, Length 938 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNED1-210ENST00000483962 C1QTNF8P60827 252 aa23.64■■□□□ 1.37
SNED1-210ENST00000483962 ADGRA1Q86SQ6 560 aa23.64■■□□□ 1.37
SNED1-210ENST00000483962 PPP4R2Q9NY27 417 aa23.64■■□□□ 1.37
SNED1-210ENST00000483962 GPR75-ASB3A0A0A6YYF3 556 aa23.63■■□□□ 1.37
SNED1-210ENST00000483962 BTDP43251 543 aa23.63■■□□□ 1.37
SNED1-210ENST00000483962 CDC42EP5Q6NZY7 148 aa23.63■■□□□ 1.37
SNED1-210ENST00000483962 APOBEC3FQ8IUX4 373 aaKnown RBP23.63■■□□□ 1.37
SNED1-210ENST00000483962 SULF1Q8IWU6 871 aa23.63■■□□□ 1.37
SNED1-210ENST00000483962 MAGEB6Q8N7X4 407 aa23.63■■□□□ 1.37
SNED1-210ENST00000483962 OSBPL3Q9H4L5 887 aa23.63■■□□□ 1.37
SNED1-210ENST00000483962 VEZTQ9HBM0 779 aa23.63■■□□□ 1.37
SNED1-210ENST00000483962 PASKQ96RG2 1323 aa23.62■■□□□ 1.37
SNED1-210ENST00000483962 PDE6AP16499 860 aa23.62■■□□□ 1.37
SNED1-210ENST00000483962 CYP7A1P22680 504 aa23.62■■□□□ 1.37
SNED1-210ENST00000483962 CACNB3P54284 484 aa23.62■■□□□ 1.37
SNED1-210ENST00000483962 TRPM7Q96QT4 1865 aa23.62■■□□□ 1.37
SNED1-210ENST00000483962 CHGBP05060 677 aa23.61■■□□□ 1.37
SNED1-210ENST00000483962 SLC9C2Q5TAH2 1124 aa23.61■■□□□ 1.37
SNED1-210ENST00000483962 KBTBD3Q8NAB2 608 aa23.61■■□□□ 1.37
SNED1-210ENST00000483962 USP40Q9NVE5 1235 aa23.61■■□□□ 1.37
SNED1-210ENST00000483962 TCRBV5S4A2TA0A5A2 114 aa23.6■■□□□ 1.37
SNED1-210ENST00000483962 RHBDL3P58872 404 aa23.6■■□□□ 1.37
SNED1-210ENST00000483962 SLFNL1Q499Z3 407 aa23.6■■□□□ 1.37
SNED1-210ENST00000483962 TCP10L2B9ZVM9 353 aa23.59■■□□□ 1.37
SNED1-210ENST00000483962 ADD2P35612 726 aa23.59■■□□□ 1.37
SNED1-210ENST00000483962 PRAMEF18Q5VWM3 479 aa23.59■■□□□ 1.37
SNED1-210ENST00000483962 DEFB129Q9H1M3 183 aa23.59■■□□□ 1.37
SNED1-210ENST00000483962 ZNF532Q9HCE3 1301 aa23.59■■□□□ 1.37
SNED1-210ENST00000483962 CDK5RAP2Q96SN8 1893 aa23.58■■□□□ 1.37
SNED1-210ENST00000483962 CNTNAP1P78357 1384 aa23.58■■□□□ 1.37
SNED1-210ENST00000483962 PPP4CP60510 307 aa23.58■■□□□ 1.37
SNED1-210ENST00000483962 DYNLL1P63167 89 aaKnown RBP23.58■■□□□ 1.37
SNED1-210ENST00000483962 TMED8Q6PL24 325 aaPredicted RBP23.58■■□□□ 1.37
SNED1-210ENST00000483962 SKAP1Q86WV1 359 aa23.58■■□□□ 1.37
SNED1-210ENST00000483962 DDX24Q9GZR7 859 aaKnown RBP eCLIP23.58■■□□□ 1.37
SNED1-210ENST00000483962 AATFQ9NY61 560 aaKnown RBP eCLIP23.58■■□□□ 1.37
SNED1-210ENST00000483962 NFIAQ12857 509 aa23.57■■□□□ 1.36
SNED1-210ENST00000483962 RASA3Q14644 834 aa23.57■■□□□ 1.36
SNED1-210ENST00000483962 FKBP1CQ5VVH2 108 aa23.57■■□□□ 1.36
SNED1-210ENST00000483962 MIGA1Q8NAN2 632 aa23.57■■□□□ 1.36
SNED1-210ENST00000483962 CDCA5Q96FF9 252 aa23.57■■□□□ 1.36
SNED1-210ENST00000483962 TMOD2Q9NZR1 351 aa23.57■■□□□ 1.36
SNED1-210ENST00000483962 RFX7Q2KHR2 1363 aa23.56■■□□□ 1.36
SNED1-210ENST00000483962 SH3RF3Q8TEJ3 882 aaPredicted RBP23.56■■□□□ 1.36
SNED1-210ENST00000483962 NOL10Q9BSC4 688 aaKnown RBP23.56■■□□□ 1.36
SNED1-210ENST00000483962 FAM198AQ9UFP1 575 aa23.56■■□□□ 1.36
SNED1-210ENST00000483962 WDHD1O75717 1129 aaPredicted RBP23.55■■□□□ 1.36
SNED1-210ENST00000483962 BAG3O95817 575 aa23.55■■□□□ 1.36
SNED1-210ENST00000483962 TNFAIP1Q13829 316 aa23.55■■□□□ 1.36
SNED1-210ENST00000483962 CST9Q5W186 159 aa23.55■■□□□ 1.36
SNED1-210ENST00000483962 IDI2Q9BXS1 227 aa23.55■■□□□ 1.36
SNED1-210ENST00000483962 AK9Q5TCS8 1911 aa23.55■■□□□ 1.36
SNED1-210ENST00000483962 UBE3CQ15386 1083 aa23.54■■□□□ 1.36
SNED1-210ENST00000483962 ZSCAN25Q6NSZ9 544 aa23.54■■□□□ 1.36
SNED1-210ENST00000483962 FAM83AQ86UY5 434 aa23.54■■□□□ 1.36
SNED1-210ENST00000483962 CDAN1Q8IWY9 1227 aa23.54■■□□□ 1.36
SNED1-210ENST00000483962 EVI5LQ96CN4 794 aa23.54■■□□□ 1.36
SNED1-210ENST00000483962 RIOK1Q9BRS2 568 aaKnown RBP23.54■■□□□ 1.36
SNED1-210ENST00000483962 FSD1Q9BTV5 496 aa23.54■■□□□ 1.36
SNED1-210ENST00000483962 TMEM39BQ9GZU3 492 aa23.54■■□□□ 1.36
SNED1-210ENST00000483962 DDX4Q9NQI0 724 aaKnown RBP23.54■■□□□ 1.36
SNED1-210ENST00000483962 PPP2R3BQ9Y5P8 575 aa23.54■■□□□ 1.36
SNED1-210ENST00000483962 FOCADQ5VW36 1801 aa23.54■■□□□ 1.36
SNED1-210ENST00000483962 RNF113AO15541 343 aaKnown RBP23.53■■□□□ 1.36
SNED1-210ENST00000483962 CELF2O95319 508 aaKnown RBP23.53■■□□□ 1.36
SNED1-210ENST00000483962 TNNI2P48788 182 aa23.53■■□□□ 1.36
SNED1-210ENST00000483962 RGS3P49796 1198 aa23.53■■□□□ 1.36
SNED1-210ENST00000483962 APLP1P51693 650 aa23.53■■□□□ 1.36
SNED1-210ENST00000483962 TCP10Q12799 353 aa23.53■■□□□ 1.36
SNED1-210ENST00000483962 ZFPM1Q8IX07 1006 aa23.53■■□□□ 1.36
SNED1-210ENST00000483962 TEX11Q8IYF3 940 aa23.53■■□□□ 1.36
SNED1-210ENST00000483962 TEPSINQ96N21 525 aa23.53■■□□□ 1.36
SNED1-210ENST00000483962 ZNF408Q9H9D4 720 aa23.53■■□□□ 1.36
SNED1-210ENST00000483962 MAGEB6P1A0A0J9YX57 407 aa23.52■■□□□ 1.36
SNED1-210ENST00000483962 TRIM6-TRIM34B2RNG4 842 aa23.52■■□□□ 1.36
SNED1-210ENST00000483962 PLCG2P16885 1265 aa23.52■■□□□ 1.36
SNED1-210ENST00000483962 TTC22Q5TAA0 569 aa23.52■■□□□ 1.36
SNED1-210ENST00000483962 NBPF12Q5TAG4 269 aaPredicted RBP23.52■■□□□ 1.36
SNED1-210ENST00000483962 FAM151AQ8WW52 585 aa23.52■■□□□ 1.36
SNED1-210ENST00000483962 GSPT1P15170 499 aaKnown RBP23.51■■□□□ 1.35
SNED1-210ENST00000483962 HSPA6P17066 643 aa23.51■■□□□ 1.35
SNED1-210ENST00000483962 PICALMQ13492 652 aa23.51■■□□□ 1.35
SNED1-210ENST00000483962 RILPL2Q969X0 211 aa23.51■■□□□ 1.35
SNED1-210ENST00000483962 SSC5DA1L4H1 1573 aa23.51■■□□□ 1.35
SNED1-210ENST00000483962 ENTPD3O75355 529 aa23.5■■□□□ 1.35
SNED1-210ENST00000483962 ZFYP08048 801 aaPredicted RBP23.5■■□□□ 1.35
SNED1-210ENST00000483962 LCORLQ8N3X6 602 aa23.5■■□□□ 1.35
SNED1-210ENST00000483962 OSBP2Q969R2 916 aa23.5■■□□□ 1.35
SNED1-210ENST00000483962 PUS7LQ9H0K6 701 aaKnown RBP23.5■■□□□ 1.35
SNED1-210ENST00000483962 TMEM88BA6NKF7 163 aa23.49■■□□□ 1.35
SNED1-210ENST00000483962 NPM3O75607 178 aaKnown RBP23.49■■□□□ 1.35
SNED1-210ENST00000483962 LRRFIP1Q32MZ4 808 aaKnown RBP23.49■■□□□ 1.35
SNED1-210ENST00000483962 CERS3Q8IU89 383 aa23.49■■□□□ 1.35
SNED1-210ENST00000483962 TGFBRAP1Q8WUH2 860 aa23.49■■□□□ 1.35
SNED1-210ENST00000483962 APPBP2Q92624 585 aa23.49■■□□□ 1.35
SNED1-210ENST00000483962 ARMT1Q9H993 441 aa23.49■■□□□ 1.35
SNED1-210ENST00000483962 MBD4O95243 580 aa23.48■■□□□ 1.35
SNED1-210ENST00000483962 SH3BP5LQ7L8J4 393 aa23.48■■□□□ 1.35
SNED1-210ENST00000483962 RPAP1Q9BWH6 1393 aaPredicted RBP23.48■■□□□ 1.35
SNED1-210ENST00000483962 HTRA3P83110 453 aa23.47■■□□□ 1.35
Retrieved 100 of 20,778 RNA–protein pairs in 24.7 ms