RNA–Protein interactions for RNA: ENST00000481879.1

KDM1A-204, Transcript of lysine demethylase 1A, humanhuman

TSL 3

Gene KDM1A, Length 525 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KDM1A-204ENST00000481879 LGR6Q9HBX8 967 aa5.31□□□□□ -1.56
KDM1A-204ENST00000481879 SLC5A6Q9Y289 635 aa5.31□□□□□ -1.56
KDM1A-204ENST00000481879 DAGLAQ9Y4D2 1042 aa5.31□□□□□ -1.56
KDM1A-204ENST00000481879 SYNGAP1Q96PV0 1343 aa5.3□□□□□ -1.56
KDM1A-204ENST00000481879 DYNC1LI2O43237 492 aaPredicted RBP5.3□□□□□ -1.56
KDM1A-204ENST00000481879 PDE3AQ14432 1141 aa5.3□□□□□ -1.56
KDM1A-204ENST00000481879 CYP27C1Q4G0S4 372 aa5.3□□□□□ -1.56
KDM1A-204ENST00000481879 USPL1Q5W0Q7 1092 aa5.3□□□□□ -1.56
KDM1A-204ENST00000481879 KRTAP9-3Q9BYQ3 159 aa5.3□□□□□ -1.56
KDM1A-204ENST00000481879 EHD4Q9H223 541 aa5.3□□□□□ -1.56
KDM1A-204ENST00000481879 ZNF576Q9H609 170 aa5.3□□□□□ -1.56
KDM1A-204ENST00000481879 BRPF3Q9ULD4 1205 aa5.3□□□□□ -1.56
KDM1A-204ENST00000481879 ITPKAP23677 461 aa5.29□□□□□ -1.56
KDM1A-204ENST00000481879 STK11IPQ8N1F8 1099 aa5.29□□□□□ -1.56
KDM1A-204ENST00000481879 WDR18Q9BV38 432 aa5.29□□□□□ -1.56
KDM1A-204ENST00000481879 PPP1R9AQ9ULJ8 1098 aa5.29□□□□□ -1.56
KDM1A-204ENST00000481879 CARNS1A5YM72 827 aa5.28□□□□□ -1.56
KDM1A-204ENST00000481879 DBX1A6NMT0 343 aa5.28□□□□□ -1.56
KDM1A-204ENST00000481879 BIN1O00499 593 aa5.28□□□□□ -1.56
KDM1A-204ENST00000481879 ICMTO60725 284 aa5.28□□□□□ -1.56
KDM1A-204ENST00000481879 PTPN12Q05209 780 aaKnown RBP5.28□□□□□ -1.56
KDM1A-204ENST00000481879 AP3B2Q13367 1082 aa5.28□□□□□ -1.56
KDM1A-204ENST00000481879 PLCL1Q15111 1095 aa5.28□□□□□ -1.56
KDM1A-204ENST00000481879 SPRED2Q7Z698 418 aa5.28□□□□□ -1.56
KDM1A-204ENST00000481879 CCDC82Q8N4S0 544 aa5.28□□□□□ -1.56
KDM1A-204ENST00000481879 MISP3Q96FF7 219 aa5.28□□□□□ -1.56
KDM1A-204ENST00000481879 EGFL7Q9UHF1 273 aa5.28□□□□□ -1.56
KDM1A-204ENST00000481879 CPNE3O75131 537 aaKnown RBP5.27□□□□□ -1.57
KDM1A-204ENST00000481879 PAPLNO95428 1278 aa5.27□□□□□ -1.57
KDM1A-204ENST00000481879 SLFN14P0C7P3 912 aa5.27□□□□□ -1.57
KDM1A-204ENST00000481879 BNIP3Q12983 259 aa5.27□□□□□ -1.57
KDM1A-204ENST00000481879 ZNF792Q3KQV3 632 aa5.27□□□□□ -1.57
KDM1A-204ENST00000481879 ZNF574Q6ZN55 896 aaPredicted RBP5.27□□□□□ -1.57
KDM1A-204ENST00000481879 CRIM1Q9NZV1 1036 aa5.27□□□□□ -1.57
KDM1A-204ENST00000481879 TMPRSS2O15393 492 aa5.26□□□□□ -1.57
KDM1A-204ENST00000481879 ZNF865P0CJ78 1059 aaPredicted RBP5.26□□□□□ -1.57
KDM1A-204ENST00000481879 LIG1P18858 919 aa5.26□□□□□ -1.57
KDM1A-204ENST00000481879 PDE3BQ13370 1112 aa5.26□□□□□ -1.57
KDM1A-204ENST00000481879 ECM1Q16610 540 aa5.26□□□□□ -1.57
KDM1A-204ENST00000481879 RPS26P11Q5JNZ5 115 aaPredicted RBP5.26□□□□□ -1.57
KDM1A-204ENST00000481879 WFDC3Q8IUB2 231 aa5.26□□□□□ -1.57
KDM1A-204ENST00000481879 NETO1Q8TDF5 533 aa5.26□□□□□ -1.57
KDM1A-204ENST00000481879 WDR89Q96FK6 387 aaPredicted RBP5.26□□□□□ -1.57
KDM1A-204ENST00000481879 ATXN3LQ9H3M9 355 aa5.26□□□□□ -1.57
KDM1A-204ENST00000481879 PIDD1Q9HB75 910 aa5.26□□□□□ -1.57
KDM1A-204ENST00000481879 NPHS2Q9NP85 383 aa5.26□□□□□ -1.57
KDM1A-204ENST00000481879 TMEM238LA0A1B0GVL6 79 aa5.25□□□□□ -1.57
KDM1A-204ENST00000481879 NDUFB5O43674 189 aa5.25□□□□□ -1.57
KDM1A-204ENST00000481879 FAM87AP0C7U9 286 aa5.25□□□□□ -1.57
KDM1A-204ENST00000481879 ZNF157P51786 506 aaPredicted RBP5.25□□□□□ -1.57
KDM1A-204ENST00000481879 ID3Q02535 119 aa5.25□□□□□ -1.57
KDM1A-204ENST00000481879 CDK5R2Q13319 367 aa5.25□□□□□ -1.57
KDM1A-204ENST00000481879 ORC1Q13415 861 aa5.25□□□□□ -1.57
KDM1A-204ENST00000481879 GLYCTKQ8IVS8 523 aa5.25□□□□□ -1.57
KDM1A-204ENST00000481879 PLD6Q8N2A8 252 aaKnown RBP5.25□□□□□ -1.57
KDM1A-204ENST00000481879 CCDC74AQ96AQ1 378 aa5.25□□□□□ -1.57
KDM1A-204ENST00000481879 FANCD2OSQ96PS1 177 aa5.25□□□□□ -1.57
KDM1A-204ENST00000481879 ZC3H12CQ9C0D7 883 aaKnown RBP5.25□□□□□ -1.57
KDM1A-204ENST00000481879 CCDC86Q9H6F5 360 aaKnown RBP5.25□□□□□ -1.57
KDM1A-204ENST00000481879 VAV3Q9UKW4 847 aa5.25□□□□□ -1.57
KDM1A-204ENST00000481879 NCANO14594 1321 aa5.24□□□□□ -1.57
KDM1A-204ENST00000481879 CARMIL2Q6F5E8 1435 aa5.24□□□□□ -1.57
KDM1A-204ENST00000481879 H3BRB1 525 aa5.24□□□□□ -1.57
KDM1A-204ENST00000481879 GADD45BO75293 160 aaPredicted RBP5.24□□□□□ -1.57
KDM1A-204ENST00000481879 CD8BP10966 210 aa5.24□□□□□ -1.57
KDM1A-204ENST00000481879 ZNF124Q15973 351 aa5.24□□□□□ -1.57
KDM1A-204ENST00000481879 PRPF40BQ6NWY9 871 aaKnown RBP5.24□□□□□ -1.57
KDM1A-204ENST00000481879 ATG4DQ86TL0 474 aaPredicted RBP5.24□□□□□ -1.57
KDM1A-204ENST00000481879 SMYD4Q8IYR2 804 aaPredicted RBP5.24□□□□□ -1.57
KDM1A-204ENST00000481879 CITED4Q96RK1 184 aa5.24□□□□□ -1.57
KDM1A-204ENST00000481879 FAM129BQ96TA1 746 aa5.24□□□□□ -1.57
KDM1A-204ENST00000481879 TUT1Q9H6E5 874 aaKnown RBP5.24□□□□□ -1.57
KDM1A-204ENST00000481879 ABCB6Q9NP58 842 aa5.24□□□□□ -1.57
KDM1A-204ENST00000481879 DISC1Q9NRI5 854 aa5.24□□□□□ -1.57
KDM1A-204ENST00000481879 PRRG2O14669 202 aa5.23□□□□□ -1.57
KDM1A-204ENST00000481879 ZNF862O60290 1169 aa5.23□□□□□ -1.57
KDM1A-204ENST00000481879 RNGTTO60942 597 aaKnown RBP5.23□□□□□ -1.57
KDM1A-204ENST00000481879 FUT4P22083 530 aa5.23□□□□□ -1.57
KDM1A-204ENST00000481879 ARHGAP4P98171 946 aa5.23□□□□□ -1.57
KDM1A-204ENST00000481879 HNRNPUQ00839 825 aaKnown RBP eCLIP5.23□□□□□ -1.57
KDM1A-204ENST00000481879 PRKCQQ04759 706 aa5.23□□□□□ -1.57
KDM1A-204ENST00000481879 FAAP100Q0VG06 881 aa5.23□□□□□ -1.57
KDM1A-204ENST00000481879 KIF4BQ2VIQ3 1234 aa5.23□□□□□ -1.57
KDM1A-204ENST00000481879 ZNF648Q5T619 568 aaPredicted RBP5.23□□□□□ -1.57
KDM1A-204ENST00000481879 B4GALNT3Q6L9W6 998 aa5.23□□□□□ -1.57
KDM1A-204ENST00000481879 FAM181AQ8N9Y4 354 aa5.23□□□□□ -1.57
KDM1A-204ENST00000481879 PI4K2BQ8TCG2 481 aa5.23□□□□□ -1.57
KDM1A-204ENST00000481879 DNAJC25Q9H1X3 360 aa5.23□□□□□ -1.57
KDM1A-204ENST00000481879 RC3H2Q9HBD1 1191 aaKnown RBP5.23□□□□□ -1.57
KDM1A-204ENST00000481879 KRT82Q9NSB4 513 aa5.23□□□□□ -1.57
KDM1A-204ENST00000481879 PCOLCE2Q9UKZ9 415 aa5.23□□□□□ -1.57
KDM1A-204ENST00000481879 TRAK1Q9UPV9 953 aa5.23□□□□□ -1.57
KDM1A-204ENST00000481879 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP5.23□□□□□ -1.57
KDM1A-204ENST00000481879 EIF1AYO14602 144 aaKnown RBP5.22□□□□□ -1.57
KDM1A-204ENST00000481879 RNASE1P07998 156 aaKnown RBP5.22□□□□□ -1.57
KDM1A-204ENST00000481879 GSTP1P09211 210 aaKnown RBP5.22□□□□□ -1.57
KDM1A-204ENST00000481879 SERPINB4P48594 390 aa5.22□□□□□ -1.57
KDM1A-204ENST00000481879 TTLL4Q14679 1199 aa5.22□□□□□ -1.57
KDM1A-204ENST00000481879 IFI16Q16666 785 aaKnown RBP5.22□□□□□ -1.57
KDM1A-204ENST00000481879 ARHGAP27Q6ZUM4 889 aa5.22□□□□□ -1.57
Retrieved 100 of 20,778 RNA–protein pairs in 57.3 ms