RNA–Protein interactions for RNA: ENST00000481242.5

GARNL3-216, Transcript of GTPase activating Rap/RanGAP domain like 3, humanhuman

TSL 2

Gene GARNL3, Length 4,816 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GARNL3-216ENST00000481242 GRM1Q13255 1194 aa10.7□□□□□ -0.7
GARNL3-216ENST00000481242 ARHGEF25Q86VW2 580 aa10.7□□□□□ -0.7
GARNL3-216ENST00000481242 GIMAP7Q8NHV1 300 aa10.7□□□□□ -0.7
GARNL3-216ENST00000481242 ATP5JP18859 108 aa10.7□□□□□ -0.7
GARNL3-216ENST00000481242 IL6STP40189 918 aaPredicted RBP10.7□□□□□ -0.7
GARNL3-216ENST00000481242 APOBRQ0VD83 1088 aa10.7□□□□□ -0.7
GARNL3-216ENST00000481242 PAIP2Q9BPZ3 127 aaKnown RBP10.7□□□□□ -0.7
GARNL3-216ENST00000481242 AS3MTQ9HBK9 375 aa10.7□□□□□ -0.7
GARNL3-216ENST00000481242 ARPP21Q9UBL0 812 aaPredicted RBP10.7□□□□□ -0.7
GARNL3-216ENST00000481242 ATP7BP35670 1465 aa10.7□□□□□ -0.7
GARNL3-216ENST00000481242 SMTNP53814 917 aa10.7□□□□□ -0.7
GARNL3-216ENST00000481242 FAM193AP78312 1265 aa10.7□□□□□ -0.7
GARNL3-216ENST00000481242 ZSCAN23Q3MJ62 389 aa10.7□□□□□ -0.7
GARNL3-216ENST00000481242 ZBTB38Q8NAP3 1195 aaPredicted RBP10.7□□□□□ -0.7
GARNL3-216ENST00000481242 CHURC1Q8WUH1 139 aa10.7□□□□□ -0.7
GARNL3-216ENST00000481242 PABPN1LA6NDY0 278 aaKnown RBP10.69□□□□□ -0.7
GARNL3-216ENST00000481242 NEURL1BA8MQ27 555 aa10.69□□□□□ -0.7
GARNL3-216ENST00000481242 SLC1A4P43007 532 aa10.69□□□□□ -0.7
GARNL3-216ENST00000481242 CTSWP56202 376 aa10.69□□□□□ -0.7
GARNL3-216ENST00000481242 PABPC4Q13310 644 aaKnown RBP eCLIP10.69□□□□□ -0.7
GARNL3-216ENST00000481242 KRT25Q7Z3Z0 450 aa10.69□□□□□ -0.7
GARNL3-216ENST00000481242 DYDC1Q8WWB3 177 aa10.69□□□□□ -0.7
GARNL3-216ENST00000481242 CCDC97Q96F63 343 aaPredicted RBP10.69□□□□□ -0.7
GARNL3-216ENST00000481242 GPHNQ9NQX3 736 aaPredicted RBP10.69□□□□□ -0.7
GARNL3-216ENST00000481242 KDM2BQ8NHM5 1336 aa10.69□□□□□ -0.7
GARNL3-216ENST00000481242 CKAP4Q07065 602 aaKnown RBP10.69□□□□□ -0.7
GARNL3-216ENST00000481242 SUCLG2Q96I99 432 aa10.69□□□□□ -0.7
GARNL3-216ENST00000481242 QTRT2Q9H974 415 aaKnown RBP10.69□□□□□ -0.7
GARNL3-216ENST00000481242 GOPCQ9HD26 462 aa10.69□□□□□ -0.7
GARNL3-216ENST00000481242 LOC102724428A0A0B4J2F2 783 aa10.69□□□□□ -0.7
GARNL3-216ENST00000481242 SIK1P57059 783 aa10.69□□□□□ -0.7
GARNL3-216ENST00000481242 TUBB4BP68371 445 aa10.69□□□□□ -0.7
GARNL3-216ENST00000481242 KIAA0753Q2KHM9 967 aa10.69□□□□□ -0.7
GARNL3-216ENST00000481242 PCP11498 1178 aaKnown RBP10.69□□□□□ -0.7
GARNL3-216ENST00000481242 RPS6KB1P23443 525 aa10.69□□□□□ -0.7
GARNL3-216ENST00000481242 KRT83P78385 493 aa10.69□□□□□ -0.7
GARNL3-216ENST00000481242 SV2BQ7L1I2 683 aa10.69□□□□□ -0.7
GARNL3-216ENST00000481242 DHX58Q96C10 678 aa10.69□□□□□ -0.7
GARNL3-216ENST00000481242 PRDM10Q9NQV6 1147 aa10.69□□□□□ -0.7
GARNL3-216ENST00000481242 BIN2Q9UBW5 565 aaPredicted RBP10.69□□□□□ -0.7
GARNL3-216ENST00000481242 THRAP3Q9Y2W1 955 aaKnown RBP10.69□□□□□ -0.7
GARNL3-216ENST00000481242 WDR17Q8IZU2 1322 aa10.68□□□□□ -0.7
GARNL3-216ENST00000481242 FSD2A1L4K1 749 aa10.68□□□□□ -0.7
GARNL3-216ENST00000481242 SMC1AQ14683 1233 aaKnown RBP10.68□□□□□ -0.7
GARNL3-216ENST00000481242 SELENOOQ9BVL4 669 aa10.68□□□□□ -0.7
GARNL3-216ENST00000481242 DACT1Q9NYF0 836 aa10.68□□□□□ -0.7
GARNL3-216ENST00000481242 ADGBQ8N7X0 1667 aa10.68□□□□□ -0.7
GARNL3-216ENST00000481242 SEMA3EO15041 775 aa10.68□□□□□ -0.7
GARNL3-216ENST00000481242 CBX1P83916 185 aa10.68□□□□□ -0.7
GARNL3-216ENST00000481242 SPECC1Q5M775 1068 aa10.68□□□□□ -0.7
GARNL3-216ENST00000481242 CC2D2BQ6DHV5 1058 aa10.68□□□□□ -0.7
GARNL3-216ENST00000481242 DSCC1Q9BVC3 393 aa10.68□□□□□ -0.7
GARNL3-216ENST00000481242 USP26Q9BXU7 913 aa10.68□□□□□ -0.7
GARNL3-216ENST00000481242 CSADQ9Y600 493 aa10.68□□□□□ -0.7
GARNL3-216ENST00000481242 MYOM2P54296 1465 aa10.68□□□□□ -0.7
GARNL3-216ENST00000481242 KDRP35968 1356 aa10.68□□□□□ -0.7
GARNL3-216ENST00000481242 ADCY5O95622 1261 aa10.68□□□□□ -0.7
GARNL3-216ENST00000481242 MARCKSP29966 332 aaPredicted RBP10.68□□□□□ -0.7
GARNL3-216ENST00000481242 GIGYF2Q6Y7W6 1299 aaKnown RBP10.68□□□□□ -0.7
GARNL3-216ENST00000481242 EXOC7Q9UPT5 735 aa10.68□□□□□ -0.7
GARNL3-216ENST00000481242 NOD1Q9Y239 953 aa10.68□□□□□ -0.7
GARNL3-216ENST00000481242 ANKARQ7Z5J8 1434 aa10.68□□□□□ -0.7
GARNL3-216ENST00000481242 SGSM2O43147 1006 aa10.68□□□□□ -0.7
GARNL3-216ENST00000481242 RXRBP28702 533 aa10.68□□□□□ -0.7
GARNL3-216ENST00000481242 IFT74Q96LB3 600 aa10.68□□□□□ -0.7
GARNL3-216ENST00000481242 ARMT1Q9H993 441 aa10.68□□□□□ -0.7
GARNL3-216ENST00000481242 MAP3K15Q6ZN16 1313 aa10.67□□□□□ -0.7
GARNL3-216ENST00000481242 B4E1Z4 1266 aa10.67□□□□□ -0.7
GARNL3-216ENST00000481242 UBE4AQ14139 1066 aa10.67□□□□□ -0.7
GARNL3-216ENST00000481242 TSNARE1Q96NA8 513 aa10.67□□□□□ -0.7
GARNL3-216ENST00000481242 TNNT1P13805 278 aa10.67□□□□□ -0.7
GARNL3-216ENST00000481242 GABPB1Q06547 395 aaPredicted RBP10.67□□□□□ -0.7
GARNL3-216ENST00000481242 MCM7P33993 719 aa10.67□□□□□ -0.7
GARNL3-216ENST00000481242 CDAN1Q8IWY9 1227 aa10.67□□□□□ -0.7
GARNL3-216ENST00000481242 TM6SF1Q9BZW5 370 aa10.67□□□□□ -0.7
GARNL3-216ENST00000481242 ELP1O95163 1332 aa10.67□□□□□ -0.7
GARNL3-216ENST00000481242 TACC1O75410 805 aa10.67□□□□□ -0.7
GARNL3-216ENST00000481242 STAMBPO95630 424 aa10.67□□□□□ -0.7
GARNL3-216ENST00000481242 SNX16P57768 344 aa10.67□□□□□ -0.7
GARNL3-216ENST00000481242 PRPF4BQ13523 1007 aaKnown RBP10.67□□□□□ -0.7
GARNL3-216ENST00000481242 HLTFQ14527 1009 aaKnown RBP eCLIP10.67□□□□□ -0.7
GARNL3-216ENST00000481242 ARHGEF6Q15052 776 aa10.67□□□□□ -0.7
GARNL3-216ENST00000481242 MFSD14BQ5SR56 506 aa10.67□□□□□ -0.7
GARNL3-216ENST00000481242 IL17REQ8NFR9 667 aa10.67□□□□□ -0.7
GARNL3-216ENST00000481242 SAP30BPQ9UHR5 308 aaKnown RBP10.67□□□□□ -0.7
GARNL3-216ENST00000481242 SSX2IPQ9Y2D8 614 aa10.67□□□□□ -0.7
GARNL3-216ENST00000481242 SLC8A3P57103 927 aa10.66□□□□□ -0.7
GARNL3-216ENST00000481242 SNW1Q13573 536 aaKnown RBP10.66□□□□□ -0.7
GARNL3-216ENST00000481242 NONOQ15233 471 aaKnown RBP eCLIP10.66□□□□□ -0.7
GARNL3-216ENST00000481242 NEK11Q8NG66 645 aa10.66□□□□□ -0.7
GARNL3-216ENST00000481242 SSH3Q8TE77 659 aa10.66□□□□□ -0.7
GARNL3-216ENST00000481242 FRMD4BQ9Y2L6 1034 aa10.66□□□□□ -0.7
GARNL3-216ENST00000481242 LEMD3Q9Y2U8 911 aa10.66□□□□□ -0.7
GARNL3-216ENST00000481242 NOP56O00567 594 aaKnown RBP10.66□□□□□ -0.7
GARNL3-216ENST00000481242 LETM2Q2VYF4 491 aa10.66□□□□□ -0.7
GARNL3-216ENST00000481242 AATFQ9NY61 560 aaKnown RBP eCLIP10.66□□□□□ -0.7
GARNL3-216ENST00000481242 PPFIA3O75145 1194 aa10.66□□□□□ -0.7
GARNL3-216ENST00000481242 XRCC6P12956 609 aaKnown RBP eCLIP10.66□□□□□ -0.7
GARNL3-216ENST00000481242 NT5C2P49902 561 aa10.66□□□□□ -0.7
GARNL3-216ENST00000481242 DNM1Q05193 864 aaKnown RBP10.66□□□□□ -0.7
Retrieved 100 of 20,778 RNA–protein pairs in 32.6 ms