RNA–Protein interactions for RNA: ENST00000481205.5

RTN1-206, Transcript of reticulon 1, humanhuman

TSL 2

Gene RTN1, Length 3,169 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTN1-206ENST00000481205 RBM5P52756 815 aaKnown RBP eCLIP6.46□□□□□ -1.38
RTN1-206ENST00000481205 PPP2R5AQ15172 486 aa6.46□□□□□ -1.38
RTN1-206ENST00000481205 C1QTNF12Q5T7M4 302 aa6.46□□□□□ -1.38
RTN1-206ENST00000481205 CREB3L3Q68CJ9 461 aa6.46□□□□□ -1.38
RTN1-206ENST00000481205 PDCL2Q8N4E4 241 aa6.46□□□□□ -1.38
RTN1-206ENST00000481205 SYTL4Q96C24 671 aaPredicted RBP6.46□□□□□ -1.38
RTN1-206ENST00000481205 EDC3Q96F86 508 aaKnown RBP6.46□□□□□ -1.38
RTN1-206ENST00000481205 FAM227BQ96M60 508 aa6.46□□□□□ -1.38
RTN1-206ENST00000481205 MTMR6Q9Y217 621 aa6.46□□□□□ -1.38
RTN1-206ENST00000481205 UTYO14607 1347 aa6.46□□□□□ -1.38
RTN1-206ENST00000481205 RREB1Q92766 1687 aa6.46□□□□□ -1.38
RTN1-206ENST00000481205 GOLGA6L6A8MZA4 724 aa6.45□□□□□ -1.38
RTN1-206ENST00000481205 CTAGE5O15320 804 aa6.45□□□□□ -1.38
RTN1-206ENST00000481205 IPO7O95373 1038 aaKnown RBP6.45□□□□□ -1.38
RTN1-206ENST00000481205 STK3Q13188 491 aa6.45□□□□□ -1.38
RTN1-206ENST00000481205 NMIQ13287 307 aaPredicted RBP6.45□□□□□ -1.38
RTN1-206ENST00000481205 ME3Q16798 604 aa6.45□□□□□ -1.38
RTN1-206ENST00000481205 DDX46Q7L014 1031 aaKnown RBP6.45□□□□□ -1.38
RTN1-206ENST00000481205 SYNE4Q8N205 404 aa6.45□□□□□ -1.38
RTN1-206ENST00000481205 MSL3Q8N5Y2 521 aaKnown RBP6.45□□□□□ -1.38
RTN1-206ENST00000481205 SPC24Q8NBT2 197 aa6.45□□□□□ -1.38
RTN1-206ENST00000481205 MYRIPQ8NFW9 859 aa6.45□□□□□ -1.38
RTN1-206ENST00000481205 NUCKS1Q9H1E3 243 aaKnown RBP6.45□□□□□ -1.38
RTN1-206ENST00000481205 ZSWIM6Q9HCJ5 1215 aa6.45□□□□□ -1.38
RTN1-206ENST00000481205 THSD7AQ9UPZ6 1657 aa6.45□□□□□ -1.38
RTN1-206ENST00000481205 H0YHG0 523 aa6.45□□□□□ -1.38
RTN1-206ENST00000481205 TPM3P06753 285 aa6.45□□□□□ -1.38
RTN1-206ENST00000481205 SLFN14P0C7P3 912 aa6.45□□□□□ -1.38
RTN1-206ENST00000481205 CASP7P55210 303 aa6.45□□□□□ -1.38
RTN1-206ENST00000481205 SARNPP82979 210 aaKnown RBP6.45□□□□□ -1.38
RTN1-206ENST00000481205 NOLC1Q14978 699 aaKnown RBP eCLIP6.45□□□□□ -1.38
RTN1-206ENST00000481205 ZRSR2Q15696 482 aaKnown RBP6.45□□□□□ -1.38
RTN1-206ENST00000481205 DRC7Q8IY82 874 aa6.45□□□□□ -1.38
RTN1-206ENST00000481205 ATL2Q8NHH9 583 aa6.45□□□□□ -1.38
RTN1-206ENST00000481205 LRRN4Q8WUT4 740 aa6.45□□□□□ -1.38
RTN1-206ENST00000481205 CCDC85AQ96PX6 553 aaPredicted RBP6.45□□□□□ -1.38
RTN1-206ENST00000481205 TM6SF1Q9BZW5 370 aa6.45□□□□□ -1.38
RTN1-206ENST00000481205 VRTNQ9H8Y1 702 aa6.45□□□□□ -1.38
RTN1-206ENST00000481205 TMOD3Q9NYL9 352 aa6.45□□□□□ -1.38
RTN1-206ENST00000481205 ERICH4A6NGS2 130 aa6.45□□□□□ -1.38
RTN1-206ENST00000481205 PAX7P23759 505 aa6.45□□□□□ -1.38
RTN1-206ENST00000481205 RFX5P48382 616 aaPredicted RBP6.45□□□□□ -1.38
RTN1-206ENST00000481205 CHAF1AQ13111 956 aaPredicted RBP6.45□□□□□ -1.38
RTN1-206ENST00000481205 COL9A3Q14050 684 aaPredicted RBP6.45□□□□□ -1.38
RTN1-206ENST00000481205 ANKRD1Q15327 319 aa6.45□□□□□ -1.38
RTN1-206ENST00000481205 CAMK4Q16566 473 aa6.45□□□□□ -1.38
RTN1-206ENST00000481205 FAM173BQ6P4H8 233 aa6.45□□□□□ -1.38
RTN1-206ENST00000481205 METTL3Q86U44 580 aaKnown RBP6.45□□□□□ -1.38
RTN1-206ENST00000481205 FAM161BQ96MY7 647 aa6.45□□□□□ -1.38
RTN1-206ENST00000481205 FEZ1Q99689 392 aa6.45□□□□□ -1.38
RTN1-206ENST00000481205 NUP62CLQ9H1M0 184 aa6.45□□□□□ -1.38
RTN1-206ENST00000481205 SUDS3Q9H7L9 328 aaPredicted RBP6.45□□□□□ -1.38
RTN1-206ENST00000481205 ATG3Q9NT62 314 aa6.45□□□□□ -1.38
RTN1-206ENST00000481205 EP400Q96L91 3159 aa6.44□□□□□ -1.38
RTN1-206ENST00000481205 USP42Q9H9J4 1324 aaKnown RBP6.44□□□□□ -1.38
RTN1-206ENST00000481205 COQ9O75208 318 aa6.44□□□□□ -1.38
RTN1-206ENST00000481205 ZNF16P17020 682 aaPredicted RBP6.44□□□□□ -1.38
RTN1-206ENST00000481205 HMGN5P82970 282 aaKnown RBP6.44□□□□□ -1.38
RTN1-206ENST00000481205 PTPN12Q05209 780 aaKnown RBP6.44□□□□□ -1.38
RTN1-206ENST00000481205 NECTIN1Q15223 517 aa6.44□□□□□ -1.38
RTN1-206ENST00000481205 TMEM92Q6UXU6 159 aa6.44□□□□□ -1.38
RTN1-206ENST00000481205 C17orf53Q8N3J3 647 aaPredicted RBP6.44□□□□□ -1.38
RTN1-206ENST00000481205 PLBD2Q8NHP8 589 aa6.44□□□□□ -1.38
RTN1-206ENST00000481205 BICD2Q8TD16 824 aa6.44□□□□□ -1.38
RTN1-206ENST00000481205 PIBF1Q8WXW3 757 aa6.44□□□□□ -1.38
RTN1-206ENST00000481205 ZNF594Q96JF6 807 aaPredicted RBP6.44□□□□□ -1.38
RTN1-206ENST00000481205 TPCN1Q9ULQ1 816 aa6.44□□□□□ -1.38
RTN1-206ENST00000481205 UBAP1LF5GYI3 381 aa6.44□□□□□ -1.38
RTN1-206ENST00000481205 SLC27A2O14975 620 aa6.44□□□□□ -1.38
RTN1-206ENST00000481205 MAP3K11Q16584 847 aa6.44□□□□□ -1.38
RTN1-206ENST00000481205 LMBR1LQ6UX01 489 aa6.44□□□□□ -1.38
RTN1-206ENST00000481205 PRR7Q8TB68 274 aa6.44□□□□□ -1.38
RTN1-206ENST00000481205 TMC2Q8TDI7 906 aa6.44□□□□□ -1.38
RTN1-206ENST00000481205 ACSBG1Q96GR2 724 aa6.44□□□□□ -1.38
RTN1-206ENST00000481205 TNMDQ9H2S6 317 aa6.44□□□□□ -1.38
RTN1-206ENST00000481205 OGFRQ9NZT2 677 aa6.44□□□□□ -1.38
RTN1-206ENST00000481205 ANAPC4Q9UJX5 808 aa6.44□□□□□ -1.38
RTN1-206ENST00000481205 LAMB4A4D0S4 1761 aa6.44□□□□□ -1.38
RTN1-206ENST00000481205 ARFGEF2Q9Y6D5 1785 aa6.44□□□□□ -1.38
RTN1-206ENST00000481205 H3BQV1 296 aa6.43□□□□□ -1.38
RTN1-206ENST00000481205 USP17L8P0C7I0 530 aa6.43□□□□□ -1.38
RTN1-206ENST00000481205 RAD51AP2Q09MP3 1159 aa6.43□□□□□ -1.38
RTN1-206ENST00000481205 TFCP2Q12800 502 aa6.43□□□□□ -1.38
RTN1-206ENST00000481205 IFFO2Q5TF58 517 aa6.43□□□□□ -1.38
RTN1-206ENST00000481205 CDC37L1Q7L3B6 337 aa6.43□□□□□ -1.38
RTN1-206ENST00000481205 CCDC91Q7Z6B0 441 aa6.43□□□□□ -1.38
RTN1-206ENST00000481205 RPAINQ86UA6 219 aa6.43□□□□□ -1.38
RTN1-206ENST00000481205 CKAP2LQ8IYA6 745 aa6.43□□□□□ -1.38
RTN1-206ENST00000481205 SPATA32Q96LK8 384 aa6.43□□□□□ -1.38
RTN1-206ENST00000481205 RIPOR2Q9Y4F9 1068 aa6.43□□□□□ -1.38
RTN1-206ENST00000481205 TNS2Q63HR2 1409 aa6.43□□□□□ -1.38
RTN1-206ENST00000481205 A0A0D9SFI3 127 aa6.43□□□□□ -1.38
RTN1-206ENST00000481205 PRKAR2AP13861 404 aaKnown RBP6.43□□□□□ -1.38
RTN1-206ENST00000481205 U2AF2P26368 475 aaKnown RBP eCLIP6.43□□□□□ -1.38
RTN1-206ENST00000481205 FOXO4P98177 505 aa6.43□□□□□ -1.38
RTN1-206ENST00000481205 SF3A1Q15459 793 aaKnown RBP6.43□□□□□ -1.38
RTN1-206ENST00000481205 HLFQ16534 295 aa6.43□□□□□ -1.38
RTN1-206ENST00000481205 SLFNL1Q499Z3 407 aa6.43□□□□□ -1.38
RTN1-206ENST00000481205 PHLDB3Q6NSJ2 640 aa6.43□□□□□ -1.38
RTN1-206ENST00000481205 TTC6Q86TZ1 520 aa6.43□□□□□ -1.38
Retrieved 100 of 20,778 RNA–protein pairs in 13.2 ms