RNA–Protein interactions for RNA: ENST00000479958.6

COMMD3-212, Transcript of COMM domain containing 3, humanhuman

TSL 2

Gene COMMD3, Length 1,443 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COMMD3-212ENST00000479958 KIR2DP1A0A0G2JNF4 349 aaPredicted RBP9.4□□□□□ -0.9
COMMD3-212ENST00000479958 COBLO75128 1261 aa9.4□□□□□ -0.9
COMMD3-212ENST00000479958 ECEL1O95672 775 aa9.4□□□□□ -0.9
COMMD3-212ENST00000479958 INTS5Q6P9B9 1019 aaKnown RBP9.4□□□□□ -0.9
COMMD3-212ENST00000479958 ZC3H12CQ9C0D7 883 aaKnown RBP9.4□□□□□ -0.9
COMMD3-212ENST00000479958 PPM1HQ9ULR3 514 aa9.4□□□□□ -0.9
COMMD3-212ENST00000479958 ZCCHC6Q5VYS8 1495 aaKnown RBP9.4□□□□□ -0.91
COMMD3-212ENST00000479958 P4HBP07237 508 aaKnown RBP9.39□□□□□ -0.91
COMMD3-212ENST00000479958 LIG1P18858 919 aa9.39□□□□□ -0.91
COMMD3-212ENST00000479958 ARNTP27540 789 aa9.39□□□□□ -0.91
COMMD3-212ENST00000479958 ZDHHC13Q8IUH4 622 aa9.39□□□□□ -0.91
COMMD3-212ENST00000479958 EZH1Q92800 747 aaPredicted RBP9.39□□□□□ -0.91
COMMD3-212ENST00000479958 KCNB2Q92953 911 aa9.39□□□□□ -0.91
COMMD3-212ENST00000479958 OSBPL7Q9BZF2 842 aa9.39□□□□□ -0.91
COMMD3-212ENST00000479958 PCMTD2Q9NV79 361 aa9.39□□□□□ -0.91
COMMD3-212ENST00000479958 ACTL7BQ9Y614 415 aa9.39□□□□□ -0.91
COMMD3-212ENST00000479958 ANKRD33BA6NCL7 494 aa9.39□□□□□ -0.91
COMMD3-212ENST00000479958 WDR64B1ANS9 1081 aa9.39□□□□□ -0.91
COMMD3-212ENST00000479958 NME2P22392 152 aa9.39□□□□□ -0.91
COMMD3-212ENST00000479958 SULF2Q8IWU5 870 aa9.39□□□□□ -0.91
COMMD3-212ENST00000479958 SHKBP1Q8TBC3 707 aa9.39□□□□□ -0.91
COMMD3-212ENST00000479958 MFSD14AQ96MC6 490 aa9.39□□□□□ -0.91
COMMD3-212ENST00000479958 WDR18Q9BV38 432 aa9.39□□□□□ -0.91
COMMD3-212ENST00000479958 CCDC86Q9H6F5 360 aaKnown RBP9.39□□□□□ -0.91
COMMD3-212ENST00000479958 FAM8A1Q9UBU6 413 aa9.39□□□□□ -0.91
COMMD3-212ENST00000479958 EAPPQ56P03 285 aaPredicted RBP9.38□□□□□ -0.91
COMMD3-212ENST00000479958 C3orf58Q8NDZ4 430 aa9.38□□□□□ -0.91
COMMD3-212ENST00000479958 SETDB2Q96T68 719 aa9.38□□□□□ -0.91
COMMD3-212ENST00000479958 C12orf49Q9H741 205 aa9.38□□□□□ -0.91
COMMD3-212ENST00000479958 NFICP08651 508 aa9.37□□□□□ -0.91
COMMD3-212ENST00000479958 RAB6AP20340 208 aa9.37□□□□□ -0.91
COMMD3-212ENST00000479958 SSTR4P31391 388 aa9.37□□□□□ -0.91
COMMD3-212ENST00000479958 FBXL6Q8N531 539 aa9.37□□□□□ -0.91
COMMD3-212ENST00000479958 NECAB3Q96P71 396 aaPredicted RBP9.37□□□□□ -0.91
COMMD3-212ENST00000479958 OSBPL1AQ9BXW6 950 aa9.37□□□□□ -0.91
COMMD3-212ENST00000479958 CBX8Q9HC52 389 aa9.37□□□□□ -0.91
COMMD3-212ENST00000479958 PRPF40AO75400 957 aaKnown RBP9.36□□□□□ -0.91
COMMD3-212ENST00000479958 TGFB1P01137 390 aa9.36□□□□□ -0.91
COMMD3-212ENST00000479958 ID3Q02535 119 aa9.36□□□□□ -0.91
COMMD3-212ENST00000479958 TPTE2Q6XPS3 522 aa9.36□□□□□ -0.91
COMMD3-212ENST00000479958 ATXN3LQ9H3M9 355 aa9.36□□□□□ -0.91
COMMD3-212ENST00000479958 GSX1Q9H4S2 264 aaPredicted RBP9.36□□□□□ -0.91
COMMD3-212ENST00000479958 PIDD1Q9HB75 910 aa9.36□□□□□ -0.91
COMMD3-212ENST00000479958 LEMD3Q9Y2U8 911 aa9.36□□□□□ -0.91
COMMD3-212ENST00000479958 CPSF6Q16630 551 aaKnown RBP eCLIP9.35□□□□□ -0.91
COMMD3-212ENST00000479958 KIF4BQ2VIQ3 1234 aa9.35□□□□□ -0.91
COMMD3-212ENST00000479958 ANKRD24Q8TF21 1146 aa9.35□□□□□ -0.91
COMMD3-212ENST00000479958 TBC1D32Q96NH3 1257 aa9.35□□□□□ -0.91
COMMD3-212ENST00000479958 METTL22Q9BUU2 404 aaPredicted RBP9.35□□□□□ -0.91
COMMD3-212ENST00000479958 ACSS3Q9H6R3 686 aa9.35□□□□□ -0.91
COMMD3-212ENST00000479958 FAM105AQ9NUU6 356 aa9.35□□□□□ -0.91
COMMD3-212ENST00000479958 PPP1R9AQ9ULJ8 1098 aa9.35□□□□□ -0.91
COMMD3-212ENST00000479958 EIF4BP23588 611 aaKnown RBP9.34□□□□□ -0.91
COMMD3-212ENST00000479958 GNA15P30679 374 aa9.34□□□□□ -0.91
COMMD3-212ENST00000479958 LRRC14Q15048 493 aa9.34□□□□□ -0.91
COMMD3-212ENST00000479958 WDR89Q96FK6 387 aaPredicted RBP9.34□□□□□ -0.91
COMMD3-212ENST00000479958 CRIM1Q9NZV1 1036 aa9.34□□□□□ -0.91
COMMD3-212ENST00000479958 PRKAG2Q9UGJ0 569 aa9.34□□□□□ -0.91
COMMD3-212ENST00000479958 PRR19A6NJB7 356 aa9.33□□□□□ -0.92
COMMD3-212ENST00000479958 ZNF862O60290 1169 aa9.33□□□□□ -0.92
COMMD3-212ENST00000479958 USP17L7P0C7H9 530 aa9.33□□□□□ -0.92
COMMD3-212ENST00000479958 CD97P48960 835 aa9.33□□□□□ -0.92
COMMD3-212ENST00000479958 CYP27A1Q02318 531 aa9.33□□□□□ -0.92
COMMD3-212ENST00000479958 DUSP27Q5VZP5 1158 aa9.33□□□□□ -0.92
COMMD3-212ENST00000479958 MAP1SQ66K74 1059 aaPredicted RBP9.33□□□□□ -0.92
COMMD3-212ENST00000479958 PDZD3Q86UT5 571 aa9.33□□□□□ -0.92
COMMD3-212ENST00000479958 SEMA6CQ9H3T2 930 aa9.33□□□□□ -0.92
COMMD3-212ENST00000479958 PIM2Q9P1W9 311 aa9.33□□□□□ -0.92
COMMD3-212ENST00000479958 TMPRSS2O15393 492 aa9.32□□□□□ -0.92
COMMD3-212ENST00000479958 F13BP05160 661 aa9.32□□□□□ -0.92
COMMD3-212ENST00000479958 ZAR1Q86SH2 424 aa9.32□□□□□ -0.92
COMMD3-212ENST00000479958 ACSBG1Q96GR2 724 aa9.32□□□□□ -0.92
COMMD3-212ENST00000479958 DAGLAQ9Y4D2 1042 aa9.32□□□□□ -0.92
COMMD3-212ENST00000479958 SCARA3Q6AZY7 606 aa9.31□□□□□ -0.92
COMMD3-212ENST00000479958 FANCD2OSQ96PS1 177 aa9.31□□□□□ -0.92
COMMD3-212ENST00000479958 GZF1Q9H116 711 aaPredicted RBP9.31□□□□□ -0.92
COMMD3-212ENST00000479958 AK5Q9Y6K8 562 aa9.31□□□□□ -0.92
COMMD3-212ENST00000479958 ENC1O14682 589 aa9.31□□□□□ -0.92
COMMD3-212ENST00000479958 RNGTTO60942 597 aaKnown RBP9.31□□□□□ -0.92
COMMD3-212ENST00000479958 ERCC3P19447 782 aa9.31□□□□□ -0.92
COMMD3-212ENST00000479958 BMP6P22004 513 aa9.31□□□□□ -0.92
COMMD3-212ENST00000479958 STK35Q8TDR2 534 aa9.31□□□□□ -0.92
COMMD3-212ENST00000479958 DUSP9Q99956 384 aaKnown RBP9.31□□□□□ -0.92
COMMD3-212ENST00000479958 CYP8B1Q9UNU6 501 aa9.31□□□□□ -0.92
COMMD3-212ENST00000479958 TTF2Q9UNY4 1162 aaKnown RBP9.31□□□□□ -0.92
COMMD3-212ENST00000479958 ZNF252P-AS1Q0IIN9 211 aa9.3□□□□□ -0.92
COMMD3-212ENST00000479958 SV2BQ7L1I2 683 aa9.3□□□□□ -0.92
COMMD3-212ENST00000479958 SSU72Q9NP77 194 aaKnown RBP9.3□□□□□ -0.92
COMMD3-212ENST00000479958 DISC1Q9NRI5 854 aa9.3□□□□□ -0.92
COMMD3-212ENST00000479958 ABCC9O60706 1549 aa9.29□□□□□ -0.92
COMMD3-212ENST00000479958 FBXO24O75426 580 aa9.29□□□□□ -0.92
COMMD3-212ENST00000479958 TRIM37O94972 964 aa9.29□□□□□ -0.92
COMMD3-212ENST00000479958 XPCQ01831 940 aaPredicted RBP9.29□□□□□ -0.92
COMMD3-212ENST00000479958 CCDC27Q2M243 656 aa9.29□□□□□ -0.92
COMMD3-212ENST00000479958 LLGL2Q6P1M3 1020 aa9.29□□□□□ -0.92
COMMD3-212ENST00000479958 SMYD4Q8IYR2 804 aaPredicted RBP9.29□□□□□ -0.92
COMMD3-212ENST00000479958 GPBAR1Q8TDU6 330 aa9.29□□□□□ -0.92
COMMD3-212ENST00000479958 PCOLCE2Q9UKZ9 415 aa9.29□□□□□ -0.92
COMMD3-212ENST00000479958 SHROOM4Q9ULL8 1493 aa9.28□□□□□ -0.92
COMMD3-212ENST00000479958 KIAA1324LA8MWY0 1029 aaPredicted RBP9.28□□□□□ -0.92
Retrieved 100 of 20,778 RNA–protein pairs in 8.2 ms