RNA–Protein interactions for RNA: ENST00000479733.5

COL13A1-208, Transcript of collagen type XIII alpha 1 chain, humanhuman

TSL 5

Gene COL13A1, Length 2,934 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL13A1-208ENST00000479733 MTF1Q14872 753 aa23.8■■□□□ 1.4
COL13A1-208ENST00000479733 ZNF827Q17R98 1081 aa23.8■■□□□ 1.4
COL13A1-208ENST00000479733 METTL16Q86W50 562 aaKnown RBP23.8■■□□□ 1.4
COL13A1-208ENST00000479733 VPS37DQ86XT2 251 aa23.8■■□□□ 1.4
COL13A1-208ENST00000479733 KCNH5Q8NCM2 988 aa23.8■■□□□ 1.4
COL13A1-208ENST00000479733 PHKBQ93100 1093 aa23.8■■□□□ 1.4
COL13A1-208ENST00000479733 CHMP4CQ96CF2 233 aa23.8■■□□□ 1.4
COL13A1-208ENST00000479733 PUF60Q9UHX1 559 aaKnown RBP23.8■■□□□ 1.4
COL13A1-208ENST00000479733 GCP02774 474 aa23.8■■□□□ 1.4
COL13A1-208ENST00000479733 RALYLQ86SE5 291 aaKnown RBP23.8■■□□□ 1.4
COL13A1-208ENST00000479733 ALG1Q9BT22 464 aa23.8■■□□□ 1.4
COL13A1-208ENST00000479733 LZTFL1Q9NQ48 299 aa23.8■■□□□ 1.4
COL13A1-208ENST00000479733 ADAM21Q9UKJ8 722 aa23.8■■□□□ 1.4
COL13A1-208ENST00000479733 LTN1O94822 1766 aa23.8■■□□□ 1.4
COL13A1-208ENST00000479733 H3BQF6 201 aa23.8■■□□□ 1.4
COL13A1-208ENST00000479733 BMP6P22004 513 aa23.8■■□□□ 1.4
COL13A1-208ENST00000479733 ATP8B1O43520 1251 aa23.79■■□□□ 1.4
COL13A1-208ENST00000479733 TNNT3P45378 269 aaPredicted RBP23.79■■□□□ 1.4
COL13A1-208ENST00000479733 ANTXR2P58335 489 aa23.79■■□□□ 1.4
COL13A1-208ENST00000479733 PDE4CQ08493 712 aa23.79■■□□□ 1.4
COL13A1-208ENST00000479733 LONRF2Q1L5Z9 754 aa23.79■■□□□ 1.4
COL13A1-208ENST00000479733 A0A1B0GUL7 405 aa23.78■■□□□ 1.4
COL13A1-208ENST00000479733 RSRC2Q7L4I2 434 aaKnown RBP23.78■■□□□ 1.4
COL13A1-208ENST00000479733 TC2NQ8N9U0 490 aa23.78■■□□□ 1.4
COL13A1-208ENST00000479733 GOLGA1Q92805 767 aa23.78■■□□□ 1.4
COL13A1-208ENST00000479733 CCDC102BQ68D86 513 aa23.77■■□□□ 1.4
COL13A1-208ENST00000479733 A0A0U1RQJ8 604 aa23.77■■□□□ 1.4
COL13A1-208ENST00000479733 UBE2Q2LH0YL09 131 aa23.77■■□□□ 1.4
COL13A1-208ENST00000479733 FOXP2O15409 715 aa23.77■■□□□ 1.4
COL13A1-208ENST00000479733 KRT40Q6A162 431 aa23.77■■□□□ 1.4
COL13A1-208ENST00000479733 CPLX3Q8WVH0 158 aa23.77■■□□□ 1.4
COL13A1-208ENST00000479733 ATRIPQ8WXE1 791 aa23.77■■□□□ 1.4
COL13A1-208ENST00000479733 PUS3Q9BZE2 481 aaKnown RBP23.77■■□□□ 1.4
COL13A1-208ENST00000479733 NFE2L3Q9Y4A8 694 aa23.77■■□□□ 1.4
COL13A1-208ENST00000479733 FCHSD1Q86WN1 690 aa23.77■■□□□ 1.39
COL13A1-208ENST00000479733 KIFC2Q96AC6 838 aa23.77■■□□□ 1.39
COL13A1-208ENST00000479733 MRPL44Q9H9J2 332 aaKnown RBP23.77■■□□□ 1.39
COL13A1-208ENST00000479733 KCNH3Q9ULD8 1083 aa23.77■■□□□ 1.39
COL13A1-208ENST00000479733 HPSEQ9Y251 543 aa23.77■■□□□ 1.39
COL13A1-208ENST00000479733 RABGGTAQ92696 567 aa23.76■■□□□ 1.39
COL13A1-208ENST00000479733 AK7Q96M32 723 aa23.76■■□□□ 1.39
COL13A1-208ENST00000479733 C19orf44Q9H6X5 657 aa23.76■■□□□ 1.39
COL13A1-208ENST00000479733 SLC52A2Q9HAB3 445 aa23.76■■□□□ 1.39
COL13A1-208ENST00000479733 FMR1Q06787 632 aaKnown RBP eCLIP23.76■■□□□ 1.39
COL13A1-208ENST00000479733 SLC20A2Q08357 652 aa23.76■■□□□ 1.39
COL13A1-208ENST00000479733 MB21D2Q8IYB1 491 aaPredicted RBP23.76■■□□□ 1.39
COL13A1-208ENST00000479733 NCOA7Q8NI08 942 aa23.76■■□□□ 1.39
COL13A1-208ENST00000479733 NKX2-3Q8TAU0 364 aa23.76■■□□□ 1.39
COL13A1-208ENST00000479733 CCDC85AQ96PX6 553 aaPredicted RBP23.76■■□□□ 1.39
COL13A1-208ENST00000479733 VPS18Q9P253 973 aa23.76■■□□□ 1.39
COL13A1-208ENST00000479733 SPECC1LQ69YQ0 1117 aa23.75■■□□□ 1.39
COL13A1-208ENST00000479733 WWC2Q6AWC2 1192 aa23.75■■□□□ 1.39
COL13A1-208ENST00000479733 JMYQ8N9B5 988 aa23.75■■□□□ 1.39
COL13A1-208ENST00000479733 PDE11AQ9HCR9 933 aa23.75■■□□□ 1.39
COL13A1-208ENST00000479733 STX10O60499 249 aa23.75■■□□□ 1.39
COL13A1-208ENST00000479733 TFRCP02786 760 aaKnown RBP23.75■■□□□ 1.39
COL13A1-208ENST00000479733 FOXO4P98177 505 aa23.75■■□□□ 1.39
COL13A1-208ENST00000479733 MICU3Q86XE3 530 aa23.75■■□□□ 1.39
COL13A1-208ENST00000479733 GRAMD1CQ8IYS0 662 aa23.75■■□□□ 1.39
COL13A1-208ENST00000479733 TTC5Q8N0Z6 440 aa23.75■■□□□ 1.39
COL13A1-208ENST00000479733 PUS7LQ9H0K6 701 aaKnown RBP23.75■■□□□ 1.39
COL13A1-208ENST00000479733 SOWAHDA6NJG2 315 aa23.74■■□□□ 1.39
COL13A1-208ENST00000479733 TXLNAP40222 546 aa23.74■■□□□ 1.39
COL13A1-208ENST00000479733 PTPAQ15257 358 aa23.74■■□□□ 1.39
COL13A1-208ENST00000479733 MUM1L1Q5H9M0 696 aa23.74■■□□□ 1.39
COL13A1-208ENST00000479733 SUGCTQ9HAC7 445 aa23.74■■□□□ 1.39
COL13A1-208ENST00000479733 ZNF213O14771 459 aa23.74■■□□□ 1.39
COL13A1-208ENST00000479733 PI16Q6UXB8 463 aa23.74■■□□□ 1.39
COL13A1-208ENST00000479733 ARHGEF25Q86VW2 580 aa23.74■■□□□ 1.39
COL13A1-208ENST00000479733 TSPYL1Q9H0U9 437 aa23.74■■□□□ 1.39
COL13A1-208ENST00000479733 RSPH14Q9UHP6 348 aa23.74■■□□□ 1.39
COL13A1-208ENST00000479733 MYO1CO00159 1063 aa23.73■■□□□ 1.39
COL13A1-208ENST00000479733 LRP10Q7Z4F1 713 aa23.73■■□□□ 1.39
COL13A1-208ENST00000479733 MYL10Q9BUA6 226 aa23.73■■□□□ 1.39
COL13A1-208ENST00000479733 SENP2Q9HC62 589 aa23.73■■□□□ 1.39
COL13A1-208ENST00000479733 SAMSN1Q9NSI8 373 aaKnown RBP23.73■■□□□ 1.39
COL13A1-208ENST00000479733 LMO7Q8WWI1 1683 aa23.73■■□□□ 1.39
COL13A1-208ENST00000479733 CASP7P55210 303 aa23.73■■□□□ 1.39
COL13A1-208ENST00000479733 CHMP4BP1P59074 171 aa23.73■■□□□ 1.39
COL13A1-208ENST00000479733 TBX2Q13207 712 aaPredicted RBP23.73■■□□□ 1.39
COL13A1-208ENST00000479733 RESP18Q5W5W9 173 aa23.73■■□□□ 1.39
COL13A1-208ENST00000479733 GOLGA6L9A6NEM1 432 aa23.73■■□□□ 1.39
COL13A1-208ENST00000479733 ADORA1P30542 326 aa23.73■■□□□ 1.39
COL13A1-208ENST00000479733 METAP2P50579 478 aaKnown RBP eCLIP23.73■■□□□ 1.39
COL13A1-208ENST00000479733 IPO4Q8TEX9 1081 aaKnown RBP23.73■■□□□ 1.39
COL13A1-208ENST00000479733 RASSF4Q9H2L5 321 aa23.73■■□□□ 1.39
COL13A1-208ENST00000479733 N4BP1O75113 896 aaKnown RBP23.72■■□□□ 1.39
COL13A1-208ENST00000479733 SNRPA1P09661 255 aaKnown RBP23.72■■□□□ 1.39
COL13A1-208ENST00000479733 PRR29P0C7W0 189 aa23.72■■□□□ 1.39
COL13A1-208ENST00000479733 IL15P40933 162 aaPredicted RBP23.72■■□□□ 1.39
COL13A1-208ENST00000479733 ZC3H6P61129 1189 aaKnown RBP23.72■■□□□ 1.39
COL13A1-208ENST00000479733 GRIN1Q05586 938 aa23.72■■□□□ 1.39
COL13A1-208ENST00000479733 NLRP2Q9NX02 1062 aa23.72■■□□□ 1.39
COL13A1-208ENST00000479733 ATP2B1P20020 1258 aa23.71■■□□□ 1.39
COL13A1-208ENST00000479733 RAPGEF4Q8WZA2 1011 aa23.71■■□□□ 1.39
COL13A1-208ENST00000479733 PHACTR2O75167 634 aa23.71■■□□□ 1.39
COL13A1-208ENST00000479733 PPP6R2O75170 966 aa23.71■■□□□ 1.39
COL13A1-208ENST00000479733 SCARF1Q14162 830 aa23.71■■□□□ 1.39
COL13A1-208ENST00000479733 TTC39AQ5SRH9 613 aa23.71■■□□□ 1.39
COL13A1-208ENST00000479733 MAP3K14Q99558 947 aa23.71■■□□□ 1.39
Retrieved 100 of 20,778 RNA–protein pairs in 19.1 ms