RNA–Protein interactions for RNA: ENST00000478696.5

GARNL3-214, Transcript of GTPase activating Rap/RanGAP domain like 3, humanhuman

TSL 3

Gene GARNL3, Length 488 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GARNL3-214ENST00000478696 SYNGAP1Q96PV0 1343 aa4.39□□□□□ -1.71
GARNL3-214ENST00000478696 COBLO75128 1261 aa4.38□□□□□ -1.71
GARNL3-214ENST00000478696 PRPF40AO75400 957 aaKnown RBP4.38□□□□□ -1.71
GARNL3-214ENST00000478696 P4HBP07237 508 aaKnown RBP4.38□□□□□ -1.71
GARNL3-214ENST00000478696 RAB6AP20340 208 aa4.38□□□□□ -1.71
GARNL3-214ENST00000478696 NME2P22392 152 aa4.38□□□□□ -1.71
GARNL3-214ENST00000478696 FAAP100Q0VG06 881 aa4.38□□□□□ -1.71
GARNL3-214ENST00000478696 LRRC14Q15048 493 aa4.38□□□□□ -1.71
GARNL3-214ENST00000478696 SULF2Q8IWU5 870 aa4.38□□□□□ -1.71
GARNL3-214ENST00000478696 ACSBG1Q96GR2 724 aa4.38□□□□□ -1.71
GARNL3-214ENST00000478696 METTL22Q9BUU2 404 aaPredicted RBP4.38□□□□□ -1.71
GARNL3-214ENST00000478696 ZC3H12CQ9C0D7 883 aaKnown RBP4.38□□□□□ -1.71
GARNL3-214ENST00000478696 BCL11AQ9H165 835 aa4.38□□□□□ -1.71
GARNL3-214ENST00000478696 ATXN3LQ9H3M9 355 aa4.38□□□□□ -1.71
GARNL3-214ENST00000478696 C12orf49Q9H741 205 aa4.38□□□□□ -1.71
GARNL3-214ENST00000478696 PIDD1Q9HB75 910 aa4.38□□□□□ -1.71
GARNL3-214ENST00000478696 WWC3Q9ULE0 1092 aa4.38□□□□□ -1.71
GARNL3-214ENST00000478696 LOC100996750A0A140TA64 210 aa4.37□□□□□ -1.71
GARNL3-214ENST00000478696 WDR64B1ANS9 1081 aa4.37□□□□□ -1.71
GARNL3-214ENST00000478696 ECEL1O95672 775 aa4.37□□□□□ -1.71
GARNL3-214ENST00000478696 LIG1P18858 919 aa4.37□□□□□ -1.71
GARNL3-214ENST00000478696 ERCC3P19447 782 aa4.37□□□□□ -1.71
GARNL3-214ENST00000478696 LMNB1P20700 586 aa4.37□□□□□ -1.71
GARNL3-214ENST00000478696 EIF4BP23588 611 aaKnown RBP4.37□□□□□ -1.71
GARNL3-214ENST00000478696 ARNTP27540 789 aa4.37□□□□□ -1.71
GARNL3-214ENST00000478696 GNA15P30679 374 aa4.37□□□□□ -1.71
GARNL3-214ENST00000478696 XPCQ01831 940 aaPredicted RBP4.37□□□□□ -1.71
GARNL3-214ENST00000478696 ID3Q02535 119 aa4.37□□□□□ -1.71
GARNL3-214ENST00000478696 CPSF6Q16630 551 aaKnown RBP eCLIP4.37□□□□□ -1.71
GARNL3-214ENST00000478696 CCDC27Q2M243 656 aa4.37□□□□□ -1.71
GARNL3-214ENST00000478696 MAP1SQ66K74 1059 aaPredicted RBP4.37□□□□□ -1.71
GARNL3-214ENST00000478696 DIEXFQ68CQ4 756 aaKnown RBP4.37□□□□□ -1.71
GARNL3-214ENST00000478696 CDPF1Q6NVV7 123 aa4.37□□□□□ -1.71
GARNL3-214ENST00000478696 TPTE2Q6XPS3 522 aa4.37□□□□□ -1.71
GARNL3-214ENST00000478696 FBXL6Q8N531 539 aa4.37□□□□□ -1.71
GARNL3-214ENST00000478696 SHKBP1Q8TBC3 707 aa4.37□□□□□ -1.71
GARNL3-214ENST00000478696 MFSD14AQ96MC6 490 aa4.37□□□□□ -1.71
GARNL3-214ENST00000478696 TBC1D32Q96NH3 1257 aa4.37□□□□□ -1.71
GARNL3-214ENST00000478696 WDR18Q9BV38 432 aa4.37□□□□□ -1.71
GARNL3-214ENST00000478696 OSBPL1AQ9BXW6 950 aa4.37□□□□□ -1.71
GARNL3-214ENST00000478696 KRTAP4-6Q9BYQ5 205 aa4.37□□□□□ -1.71
GARNL3-214ENST00000478696 OSBPL7Q9BZF2 842 aa4.37□□□□□ -1.71
GARNL3-214ENST00000478696 LEMD3Q9Y2U8 911 aa4.37□□□□□ -1.71
GARNL3-214ENST00000478696 ACTL7BQ9Y614 415 aa4.37□□□□□ -1.71
GARNL3-214ENST00000478696 HYAL3O43820 417 aaPredicted RBP4.36□□□□□ -1.71
GARNL3-214ENST00000478696 TGFB1P01137 390 aa4.36□□□□□ -1.71
GARNL3-214ENST00000478696 CTSBP07858 339 aa4.36□□□□□ -1.71
GARNL3-214ENST00000478696 NFICP08651 508 aa4.36□□□□□ -1.71
GARNL3-214ENST00000478696 SSTR4P31391 388 aa4.36□□□□□ -1.71
GARNL3-214ENST00000478696 RANGAP1P46060 587 aaPredicted RBP4.36□□□□□ -1.71
GARNL3-214ENST00000478696 CYP27A1Q02318 531 aa4.36□□□□□ -1.71
GARNL3-214ENST00000478696 DUSP27Q5VZP5 1158 aa4.36□□□□□ -1.71
GARNL3-214ENST00000478696 EZH1Q92800 747 aaPredicted RBP4.36□□□□□ -1.71
GARNL3-214ENST00000478696 NECAB3Q96P71 396 aaPredicted RBP4.36□□□□□ -1.71
GARNL3-214ENST00000478696 CCDC86Q9H6F5 360 aaKnown RBP4.36□□□□□ -1.71
GARNL3-214ENST00000478696 SSU72Q9NP77 194 aaKnown RBP4.36□□□□□ -1.71
GARNL3-214ENST00000478696 PICK1Q9NRD5 415 aa4.36□□□□□ -1.71
GARNL3-214ENST00000478696 PODXL2Q9NZ53 605 aa4.36□□□□□ -1.71
GARNL3-214ENST00000478696 TTF2Q9UNY4 1162 aaKnown RBP4.36□□□□□ -1.71
GARNL3-214ENST00000478696 ZBTB7CA1YPR0 619 aa4.35□□□□□ -1.71
GARNL3-214ENST00000478696 RNGTTO60942 597 aaKnown RBP4.35□□□□□ -1.71
GARNL3-214ENST00000478696 USP17L7P0C7H9 530 aa4.35□□□□□ -1.71
GARNL3-214ENST00000478696 KIF4BQ2VIQ3 1234 aa4.35□□□□□ -1.71
GARNL3-214ENST00000478696 ZDHHC13Q8IUH4 622 aa4.35□□□□□ -1.71
GARNL3-214ENST00000478696 C3orf58Q8NDZ4 430 aa4.35□□□□□ -1.71
GARNL3-214ENST00000478696 SETDB2Q96T68 719 aa4.35□□□□□ -1.71
GARNL3-214ENST00000478696 GZF1Q9H116 711 aaPredicted RBP4.35□□□□□ -1.71
GARNL3-214ENST00000478696 FAM105AQ9NUU6 356 aa4.35□□□□□ -1.71
GARNL3-214ENST00000478696 CRIM1Q9NZV1 1036 aa4.35□□□□□ -1.71
GARNL3-214ENST00000478696 PIM2Q9P1W9 311 aa4.35□□□□□ -1.71
GARNL3-214ENST00000478696 CYP8B1Q9UNU6 501 aa4.35□□□□□ -1.71
GARNL3-214ENST00000478696 DAGLAQ9Y4D2 1042 aa4.35□□□□□ -1.71
GARNL3-214ENST00000478696 AK5Q9Y6K8 562 aa4.35□□□□□ -1.71
GARNL3-214ENST00000478696 TMPRSS2O15393 492 aa4.34□□□□□ -1.71
GARNL3-214ENST00000478696 FBXO24O75426 580 aa4.34□□□□□ -1.71
GARNL3-214ENST00000478696 CD97P48960 835 aa4.34□□□□□ -1.71
GARNL3-214ENST00000478696 PSMD2Q13200 908 aa4.34□□□□□ -1.71
GARNL3-214ENST00000478696 CYP27C1Q4G0S4 372 aa4.34□□□□□ -1.71
GARNL3-214ENST00000478696 SCARA3Q6AZY7 606 aa4.34□□□□□ -1.71
GARNL3-214ENST00000478696 LLGL2Q6P1M3 1020 aa4.34□□□□□ -1.71
GARNL3-214ENST00000478696 SV2BQ7L1I2 683 aa4.34□□□□□ -1.71
GARNL3-214ENST00000478696 ZAR1Q86SH2 424 aa4.34□□□□□ -1.71
GARNL3-214ENST00000478696 PDZD3Q86UT5 571 aa4.34□□□□□ -1.71
GARNL3-214ENST00000478696 SMYD4Q8IYR2 804 aaPredicted RBP4.34□□□□□ -1.71
GARNL3-214ENST00000478696 ANKRD24Q8TF21 1146 aa4.34□□□□□ -1.71
GARNL3-214ENST00000478696 WDR89Q96FK6 387 aaPredicted RBP4.34□□□□□ -1.71
GARNL3-214ENST00000478696 FANCD2OSQ96PS1 177 aa4.34□□□□□ -1.71
GARNL3-214ENST00000478696 DUSP9Q99956 384 aaKnown RBP4.34□□□□□ -1.71
GARNL3-214ENST00000478696 SEMA6CQ9H3T2 930 aa4.34□□□□□ -1.71
GARNL3-214ENST00000478696 GSX1Q9H4S2 264 aaPredicted RBP4.34□□□□□ -1.71
GARNL3-214ENST00000478696 ACSS3Q9H6R3 686 aa4.34□□□□□ -1.71
GARNL3-214ENST00000478696 MRS2Q9HD23 443 aa4.34□□□□□ -1.71
GARNL3-214ENST00000478696 PRKAG2Q9UGJ0 569 aa4.34□□□□□ -1.71
GARNL3-214ENST00000478696 PCOLCE2Q9UKZ9 415 aa4.34□□□□□ -1.71
GARNL3-214ENST00000478696 PPP1R9AQ9ULJ8 1098 aa4.34□□□□□ -1.71
GARNL3-214ENST00000478696 ENC1O14682 589 aa4.33□□□□□ -1.72
GARNL3-214ENST00000478696 CYP26A1O43174 497 aa4.33□□□□□ -1.72
GARNL3-214ENST00000478696 ZNF862O60290 1169 aa4.33□□□□□ -1.72
GARNL3-214ENST00000478696 TRIM37O94972 964 aa4.33□□□□□ -1.72
GARNL3-214ENST00000478696 F13BP05160 661 aa4.33□□□□□ -1.72
Retrieved 100 of 20,778 RNA–protein pairs in 15.6 ms