RNA–Protein interactions for RNA: ENST00000477935.1

VPS50-214, Transcript of VPS50, EARP/GARPII complex subunit, humanhuman

TSL 2

Gene VPS50, Length 760 nt, Biotype retained intron, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS50-214ENST00000477935 PPP2R3AQ06190 1150 aa7.98□□□□□ -1.13
VPS50-214ENST00000477935 UVSSAQ2YD98 709 aa7.98□□□□□ -1.13
VPS50-214ENST00000477935 ARMC10Q8N2F6 343 aa7.98□□□□□ -1.13
VPS50-214ENST00000477935 FAM46AQ96IP4 442 aaKnown RBP7.98□□□□□ -1.13
VPS50-214ENST00000477935 CYP4F12Q9HCS2 524 aa7.98□□□□□ -1.13
VPS50-214ENST00000477935 PARP2Q9UGN5 583 aa7.98□□□□□ -1.13
VPS50-214ENST00000477935 PPM1HQ9ULR3 514 aa7.98□□□□□ -1.13
VPS50-214ENST00000477935 AK5Q9Y6K8 562 aa7.98□□□□□ -1.13
VPS50-214ENST00000477935 SNAPC4Q5SXM2 1469 aa7.98□□□□□ -1.13
VPS50-214ENST00000477935 DNMBPQ6XZF7 1577 aa7.97□□□□□ -1.13
VPS50-214ENST00000477935 SART1O43290 800 aaKnown RBP7.97□□□□□ -1.13
VPS50-214ENST00000477935 FBXO24O75426 580 aa7.97□□□□□ -1.13
VPS50-214ENST00000477935 EIF4BP23588 611 aaKnown RBP7.97□□□□□ -1.13
VPS50-214ENST00000477935 TAGLNQ01995 201 aaKnown RBP7.97□□□□□ -1.13
VPS50-214ENST00000477935 PRR23CQ6ZRP0 262 aa7.97□□□□□ -1.13
VPS50-214ENST00000477935 SMG8Q8ND04 991 aaKnown RBP7.97□□□□□ -1.13
VPS50-214ENST00000477935 SEMA6BQ9H3T3 888 aa7.97□□□□□ -1.13
VPS50-214ENST00000477935 SYNJ2O15056 1496 aa7.97□□□□□ -1.13
VPS50-214ENST00000477935 POLA1P09884 1462 aaPredicted RBP7.96□□□□□ -1.13
VPS50-214ENST00000477935 LMTK3Q96Q04 1460 aa7.96□□□□□ -1.13
VPS50-214ENST00000477935 ENC1O14682 589 aa7.96□□□□□ -1.14
VPS50-214ENST00000477935 TIAF1O95411 115 aa7.96□□□□□ -1.14
VPS50-214ENST00000477935 TRIM26Q12899 539 aaPredicted RBP7.96□□□□□ -1.14
VPS50-214ENST00000477935 HP1BP3Q5SSJ5 553 aaPredicted RBP7.96□□□□□ -1.14
VPS50-214ENST00000477935 TPTE2Q6XPS3 522 aa7.96□□□□□ -1.14
VPS50-214ENST00000477935 UTP4Q969X6 686 aaKnown RBP7.96□□□□□ -1.14
VPS50-214ENST00000477935 MYRFLQ96LU7 910 aa7.96□□□□□ -1.14
VPS50-214ENST00000477935 NECAB3Q96P71 396 aaPredicted RBP7.96□□□□□ -1.14
VPS50-214ENST00000477935 DHX15O43143 795 aaKnown RBP7.95□□□□□ -1.14
VPS50-214ENST00000477935 ITGB7P26010 798 aa7.95□□□□□ -1.14
VPS50-214ENST00000477935 DAB2P98082 770 aa7.95□□□□□ -1.14
VPS50-214ENST00000477935 PDE3AQ14432 1141 aa7.95□□□□□ -1.14
VPS50-214ENST00000477935 PPP1R3FQ6ZSY5 799 aaPredicted RBP7.95□□□□□ -1.14
VPS50-214ENST00000477935 C12orf50Q8NA57 414 aaPredicted RBP7.95□□□□□ -1.14
VPS50-214ENST00000477935 ANKRD24Q8TF21 1146 aa7.95□□□□□ -1.14
VPS50-214ENST00000477935 CEP44Q9C0F1 390 aa7.95□□□□□ -1.14
VPS50-214ENST00000477935 WDR97A6NE52 1622 aa7.95□□□□□ -1.14
VPS50-214ENST00000477935 GRIN2BQ13224 1484 aa7.94□□□□□ -1.14
VPS50-214ENST00000477935 GSTP1P09211 210 aaKnown RBP7.94□□□□□ -1.14
VPS50-214ENST00000477935 DRD2P14416 443 aa7.94□□□□□ -1.14
VPS50-214ENST00000477935 XPCQ01831 940 aaPredicted RBP7.94□□□□□ -1.14
VPS50-214ENST00000477935 PDZD3Q86UT5 571 aa7.94□□□□□ -1.14
VPS50-214ENST00000477935 SULF2Q8IWU5 870 aa7.94□□□□□ -1.14
VPS50-214ENST00000477935 STK35Q8TDR2 534 aa7.94□□□□□ -1.14
VPS50-214ENST00000477935 FAM161BQ96MY7 647 aa7.94□□□□□ -1.14
VPS50-214ENST00000477935 ZC3H12CQ9C0D7 883 aaKnown RBP7.94□□□□□ -1.14
VPS50-214ENST00000477935 ABCC10Q5T3U5 1492 aa7.94□□□□□ -1.14
VPS50-214ENST00000477935 GAS2O43903 313 aaKnown RBP7.93□□□□□ -1.14
VPS50-214ENST00000477935 BMP3P12645 472 aa7.93□□□□□ -1.14
VPS50-214ENST00000477935 NME2P22392 152 aa7.93□□□□□ -1.14
VPS50-214ENST00000477935 MFAP1P55081 439 aaKnown RBP7.93□□□□□ -1.14
VPS50-214ENST00000477935 SOX4Q06945 474 aaPredicted RBP7.93□□□□□ -1.14
VPS50-214ENST00000477935 PSMD2Q13200 908 aa7.93□□□□□ -1.14
VPS50-214ENST00000477935 TMC4Q7Z404 712 aa7.93□□□□□ -1.14
VPS50-214ENST00000477935 CCDC86Q9H6F5 360 aaKnown RBP7.93□□□□□ -1.14
VPS50-214ENST00000477935 RAD18Q9NS91 495 aa7.93□□□□□ -1.14
VPS50-214ENST00000477935 TTF2Q9UNY4 1162 aaKnown RBP7.93□□□□□ -1.14
VPS50-214ENST00000477935 RAXQ9Y2V3 346 aa7.93□□□□□ -1.14
VPS50-214ENST00000477935 TOP2AP11388 1531 aaKnown RBP7.93□□□□□ -1.14
VPS50-214ENST00000477935 AOC2O75106 756 aa7.92□□□□□ -1.14
VPS50-214ENST00000477935 PAGE1O75459 146 aa7.92□□□□□ -1.14
VPS50-214ENST00000477935 ADH5P11766 374 aa7.92□□□□□ -1.14
VPS50-214ENST00000477935 ARNTP27540 789 aa7.92□□□□□ -1.14
VPS50-214ENST00000477935 AKAP4Q5JQC9 854 aa7.92□□□□□ -1.14
VPS50-214ENST00000477935 PRSS36Q5K4E3 855 aa7.92□□□□□ -1.14
VPS50-214ENST00000477935 FAM20CQ8IXL6 584 aa7.92□□□□□ -1.14
VPS50-214ENST00000477935 C2CD4AQ8NCU7 369 aaPredicted RBP7.92□□□□□ -1.14
VPS50-214ENST00000477935 WDR18Q9BV38 432 aa7.92□□□□□ -1.14
VPS50-214ENST00000477935 BCL2L13Q9BXK5 485 aa7.92□□□□□ -1.14
VPS50-214ENST00000477935 KRT82Q9NSB4 513 aa7.92□□□□□ -1.14
VPS50-214ENST00000477935 HIF3AQ9Y2N7 669 aa7.92□□□□□ -1.14
VPS50-214ENST00000477935 RAD54L2Q9Y4B4 1467 aa7.92□□□□□ -1.14
VPS50-214ENST00000477935 CELA3AP09093 270 aa7.91□□□□□ -1.14
VPS50-214ENST00000477935 LIG1P18858 919 aa7.91□□□□□ -1.14
VPS50-214ENST00000477935 BMP6P22004 513 aa7.91□□□□□ -1.14
VPS50-214ENST00000477935 KCNB2Q92953 911 aa7.91□□□□□ -1.14
VPS50-214ENST00000477935 WDR89Q96FK6 387 aaPredicted RBP7.91□□□□□ -1.14
VPS50-214ENST00000477935 STOML1Q9UBI4 398 aa7.91□□□□□ -1.14
VPS50-214ENST00000477935 PRDM2Q13029 1718 aa7.91□□□□□ -1.14
VPS50-214ENST00000477935 SYNGAP1Q96PV0 1343 aa7.9□□□□□ -1.14
VPS50-214ENST00000477935 ZNF862O60290 1169 aa7.9□□□□□ -1.14
VPS50-214ENST00000477935 ZNF252P-AS1Q0IIN9 211 aa7.9□□□□□ -1.14
VPS50-214ENST00000477935 SGO2Q562F6 1265 aa7.9□□□□□ -1.14
VPS50-214ENST00000477935 MAP1SQ66K74 1059 aaPredicted RBP7.9□□□□□ -1.14
VPS50-214ENST00000477935 GIPC2Q8TF65 315 aa7.9□□□□□ -1.14
VPS50-214ENST00000477935 EMILIN2Q9BXX0 1053 aa7.9□□□□□ -1.14
VPS50-214ENST00000477935 KCNF1Q9H3M0 494 aa7.9□□□□□ -1.14
VPS50-214ENST00000477935 CBX8Q9HC52 389 aa7.9□□□□□ -1.14
VPS50-214ENST00000477935 HECW2Q9P2P5 1572 aa7.89□□□□□ -1.15
VPS50-214ENST00000477935 SORBS3O60504 671 aa7.89□□□□□ -1.15
VPS50-214ENST00000477935 CTSHP09668 335 aa7.89□□□□□ -1.15
VPS50-214ENST00000477935 MEI1Q5TIA1 1274 aa7.89□□□□□ -1.15
VPS50-214ENST00000477935 BEND4Q6ZU67 534 aa7.89□□□□□ -1.15
VPS50-214ENST00000477935 SV2BQ7L1I2 683 aa7.89□□□□□ -1.15
VPS50-214ENST00000477935 TRIM42Q8IWZ5 723 aa7.89□□□□□ -1.15
VPS50-214ENST00000477935 C7orf69Q9H7B7 122 aa7.89□□□□□ -1.15
VPS50-214ENST00000477935 AP4E1Q9UPM8 1137 aa7.89□□□□□ -1.15
VPS50-214ENST00000477935 SAMM50Q9Y512 469 aa7.89□□□□□ -1.15
VPS50-214ENST00000477935 ACTL7BQ9Y614 415 aa7.89□□□□□ -1.15
VPS50-214ENST00000477935 KIF13AQ9H1H9 1805 aa7.89□□□□□ -1.15
Retrieved 100 of 20,778 RNA–protein pairs in 15 ms