RNA–Protein interactions for RNA: ENST00000477335.5

PGK1-204, Transcript of phosphoglycerate kinase 1, humanhuman

TSL 3

Gene PGK1, Length 353 nt, Biotype processed transcript, Subcellular localisation Cytosol, Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PGK1-204ENST00000477335 FAM163AQ96GL9 167 aaPredicted RBP11.17□□□□□ -0.62
PGK1-204ENST00000477335 USP26Q9BXU7 913 aa11.17□□□□□ -0.62
PGK1-204ENST00000477335 AATFQ9NY61 560 aaKnown RBP eCLIP11.17□□□□□ -0.62
PGK1-204ENST00000477335 GJA3Q9Y6H8 435 aa11.17□□□□□ -0.62
PGK1-204ENST00000477335 MYH2Q9UKX2 1941 aa11.16□□□□□ -0.62
PGK1-204ENST00000477335 GPR75-ASB3A0A0A6YYF3 556 aa11.16□□□□□ -0.62
PGK1-204ENST00000477335 MAGEB6P1A0A0J9YX57 407 aa11.16□□□□□ -0.62
PGK1-204ENST00000477335 DDNO94850 711 aaPredicted RBP11.16□□□□□ -0.62
PGK1-204ENST00000477335 EGFRP00533 1210 aa11.16□□□□□ -0.62
PGK1-204ENST00000477335 EIF6P56537 245 aaKnown RBP11.16□□□□□ -0.62
PGK1-204ENST00000477335 TNIP1Q15025 636 aa11.16□□□□□ -0.62
PGK1-204ENST00000477335 SH3RF3Q8TEJ3 882 aaPredicted RBP11.16□□□□□ -0.62
PGK1-204ENST00000477335 RUFY2Q8WXA3 655 aa11.16□□□□□ -0.62
PGK1-204ENST00000477335 ANO2Q9NQ90 1003 aa11.16□□□□□ -0.62
PGK1-204ENST00000477335 TAF6LQ9Y6J9 622 aa11.16□□□□□ -0.62
PGK1-204ENST00000477335 MYO3BQ8WXR4 1341 aa11.15□□□□□ -0.62
PGK1-204ENST00000477335 GSG1L2A8MUP6 293 aa11.15□□□□□ -0.62
PGK1-204ENST00000477335 SMIM22K7EJ46 135 aa11.15□□□□□ -0.62
PGK1-204ENST00000477335 HSPD1P10809 573 aaKnown RBP11.15□□□□□ -0.62
PGK1-204ENST00000477335 ZNF280AP59817 542 aaPredicted RBP11.15□□□□□ -0.62
PGK1-204ENST00000477335 PPP4CP60510 307 aa11.15□□□□□ -0.62
PGK1-204ENST00000477335 GSTO1P78417 241 aa11.15□□□□□ -0.62
PGK1-204ENST00000477335 EVX2Q03828 476 aa11.15□□□□□ -0.62
PGK1-204ENST00000477335 LRRFIP1Q32MZ4 808 aaKnown RBP11.15□□□□□ -0.62
PGK1-204ENST00000477335 CFAP100Q494V2 611 aa11.15□□□□□ -0.62
PGK1-204ENST00000477335 AGBL3Q8NEM8 1001 aa11.15□□□□□ -0.62
PGK1-204ENST00000477335 SDR42E1Q8WUS8 393 aa11.15□□□□□ -0.62
PGK1-204ENST00000477335 AIDAQ96BJ3 306 aa11.15□□□□□ -0.62
PGK1-204ENST00000477335 ZBED3Q96IU2 234 aaPredicted RBP11.15□□□□□ -0.62
PGK1-204ENST00000477335 ZDHHC15Q96MV8 337 aa11.15□□□□□ -0.62
PGK1-204ENST00000477335 IGSF3O75054 1194 aa11.14□□□□□ -0.63
PGK1-204ENST00000477335 USP17L8P0C7I0 530 aa11.14□□□□□ -0.63
PGK1-204ENST00000477335 HDLBPQ00341 1268 aaKnown RBP11.14□□□□□ -0.63
PGK1-204ENST00000477335 COL9A3Q14050 684 aaPredicted RBP11.14□□□□□ -0.63
PGK1-204ENST00000477335 CDC42EP5Q6NZY7 148 aa11.14□□□□□ -0.63
PGK1-204ENST00000477335 HHIPL2Q6UWX4 724 aa11.14□□□□□ -0.63
PGK1-204ENST00000477335 MICALL2Q8IY33 904 aa11.14□□□□□ -0.63
PGK1-204ENST00000477335 MAP4K1Q92918 833 aa11.14□□□□□ -0.63
PGK1-204ENST00000477335 TEKT1Q969V4 418 aa11.14□□□□□ -0.63
PGK1-204ENST00000477335 PRMT6Q96LA8 375 aaPredicted RBP11.14□□□□□ -0.63
PGK1-204ENST00000477335 MRIQ9BWK5 157 aa11.14□□□□□ -0.63
PGK1-204ENST00000477335 TSHZ2Q9NRE2 1034 aa11.14□□□□□ -0.63
PGK1-204ENST00000477335 SERPINA10Q9UK55 444 aa11.14□□□□□ -0.63
PGK1-204ENST00000477335 PALD1Q9ULE6 856 aa11.14□□□□□ -0.63
PGK1-204ENST00000477335 RBM8AQ9Y5S9 174 aaKnown RBP11.14□□□□□ -0.63
PGK1-204ENST00000477335 TACC3Q9Y6A5 838 aa11.14□□□□□ -0.63
PGK1-204ENST00000477335 ASTN2O75129 1339 aaPredicted RBP11.13□□□□□ -0.63
PGK1-204ENST00000477335 DDX60LQ5H9U9 1706 aaKnown RBP11.13□□□□□ -0.63
PGK1-204ENST00000477335 WDHD1O75717 1129 aaPredicted RBP11.13□□□□□ -0.63
PGK1-204ENST00000477335 LDHCP07864 332 aa11.13□□□□□ -0.63
PGK1-204ENST00000477335 RPS12P25398 132 aaKnown RBP11.13□□□□□ -0.63
PGK1-204ENST00000477335 EPS15P42566 896 aa11.13□□□□□ -0.63
PGK1-204ENST00000477335 CACNB3P54284 484 aa11.13□□□□□ -0.63
PGK1-204ENST00000477335 TMED8Q6PL24 325 aaPredicted RBP11.13□□□□□ -0.63
PGK1-204ENST00000477335 GPC2Q8N158 579 aa11.13□□□□□ -0.63
PGK1-204ENST00000477335 NKX2-3Q8TAU0 364 aa11.13□□□□□ -0.63
PGK1-204ENST00000477335 TRPM4Q8TD43 1214 aa11.13□□□□□ -0.63
PGK1-204ENST00000477335 DPF2Q92785 391 aa11.13□□□□□ -0.63
PGK1-204ENST00000477335 DSCC1Q9BVC3 393 aa11.13□□□□□ -0.63
PGK1-204ENST00000477335 NBPF3Q9H094 633 aa11.13□□□□□ -0.63
PGK1-204ENST00000477335 DDX4Q9NQI0 724 aaKnown RBP11.13□□□□□ -0.63
PGK1-204ENST00000477335 MKRN1Q9UHC7 482 aaKnown RBP11.13□□□□□ -0.63
PGK1-204ENST00000477335 SLC4A4Q9Y6R1 1079 aa11.13□□□□□ -0.63
PGK1-204ENST00000477335 CDK5RAP2Q96SN8 1893 aa11.12□□□□□ -0.63
PGK1-204ENST00000477335 CYP2D7A0A087X1C5 515 aa11.12□□□□□ -0.63
PGK1-204ENST00000477335 REC8O95072 547 aa11.12□□□□□ -0.63
PGK1-204ENST00000477335 FGAP02671 866 aa11.12□□□□□ -0.63
PGK1-204ENST00000477335 CYP2D6P10635 497 aa11.12□□□□□ -0.63
PGK1-204ENST00000477335 NFIAQ12857 509 aa11.12□□□□□ -0.63
PGK1-204ENST00000477335 NECTIN1Q15223 517 aa11.12□□□□□ -0.63
PGK1-204ENST00000477335 TBC1D10BQ4KMP7 808 aaPredicted RBP11.12□□□□□ -0.63
PGK1-204ENST00000477335 SAMD7Q7Z3H4 446 aa11.12□□□□□ -0.63
PGK1-204ENST00000477335 RASEFQ8IZ41 740 aa11.12□□□□□ -0.63
PGK1-204ENST00000477335 IFNL3Q8IZI9 196 aa11.12□□□□□ -0.63
PGK1-204ENST00000477335 MTMR14Q8NCE2 650 aa11.12□□□□□ -0.63
PGK1-204ENST00000477335 TBC1D32Q96NH3 1257 aa11.12□□□□□ -0.63
PGK1-204ENST00000477335 KIF2CQ99661 725 aa11.12□□□□□ -0.63
PGK1-204ENST00000477335 TDRD3Q9H7E2 651 aaKnown RBP11.12□□□□□ -0.63
PGK1-204ENST00000477335 MYOZ2Q9NPC6 264 aa11.12□□□□□ -0.63
PGK1-204ENST00000477335 USP40Q9NVE5 1235 aa11.12□□□□□ -0.63
PGK1-204ENST00000477335 GPRC5DQ9NZD1 345 aa11.12□□□□□ -0.63
PGK1-204ENST00000477335 CNOT7Q9UIV1 285 aaKnown RBP11.12□□□□□ -0.63
PGK1-204ENST00000477335 RPAP1Q9BWH6 1393 aaPredicted RBP11.12□□□□□ -0.63
PGK1-204ENST00000477335 CLRN2A0PK11 232 aa11.11□□□□□ -0.63
PGK1-204ENST00000477335 POTECB2RU33 542 aa11.11□□□□□ -0.63
PGK1-204ENST00000477335 PATL2C9JE40 543 aaKnown RBP11.11□□□□□ -0.63
PGK1-204ENST00000477335 SLC27A2O14975 620 aa11.11□□□□□ -0.63
PGK1-204ENST00000477335 HSPA4P34932 840 aa11.11□□□□□ -0.63
PGK1-204ENST00000477335 RBM5P52756 815 aaKnown RBP eCLIP11.11□□□□□ -0.63
PGK1-204ENST00000477335 HIRAP54198 1017 aaPredicted RBP11.11□□□□□ -0.63
PGK1-204ENST00000477335 ALX1Q15699 326 aa11.11□□□□□ -0.63
PGK1-204ENST00000477335 NBPF9Q3BBW0 867 aa11.11□□□□□ -0.63
PGK1-204ENST00000477335 CREB3L3Q68CJ9 461 aa11.11□□□□□ -0.63
PGK1-204ENST00000477335 KIAA1211Q6ZU35 1233 aa11.11□□□□□ -0.63
PGK1-204ENST00000477335 STOX1Q6ZVD7 989 aa11.11□□□□□ -0.63
PGK1-204ENST00000477335 MAPKAPK5Q8IW41 473 aa11.11□□□□□ -0.63
PGK1-204ENST00000477335 ZFPM1Q8IX07 1006 aa11.11□□□□□ -0.63
PGK1-204ENST00000477335 SLF2Q8IX21 1173 aa11.11□□□□□ -0.63
PGK1-204ENST00000477335 TEX11Q8IYF3 940 aa11.11□□□□□ -0.63
PGK1-204ENST00000477335 TGFBRAP1Q8WUH2 860 aa11.11□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 12.8 ms