RNA–Protein interactions for RNA: ENST00000476379.5

CCDC39-204, Transcript of coiled-coil domain containing 39, humanhuman

TSL 2

Gene CCDC39, Length 4,451 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC39-204ENST00000476379 NDUFA8P51970 172 aa5.75□□□□□ -1.49
CCDC39-204ENST00000476379 KIF4BQ2VIQ3 1234 aa5.75□□□□□ -1.49
CCDC39-204ENST00000476379 ARHGEF1Q92888 912 aaKnown RBP5.75□□□□□ -1.49
CCDC39-204ENST00000476379 UBAC1Q9BSL1 405 aa5.75□□□□□ -1.49
CCDC39-204ENST00000476379 CARD6Q9BX69 1037 aa5.75□□□□□ -1.49
CCDC39-204ENST00000476379 ARMT1Q9H993 441 aa5.75□□□□□ -1.49
CCDC39-204ENST00000476379 HIP1O00291 1037 aa5.75□□□□□ -1.49
CCDC39-204ENST00000476379 ZNF75DP51815 510 aa5.75□□□□□ -1.49
CCDC39-204ENST00000476379 STX1AQ16623 288 aa5.75□□□□□ -1.49
CCDC39-204ENST00000476379 ZNF772Q68DY9 489 aaPredicted RBP5.75□□□□□ -1.49
CCDC39-204ENST00000476379 FNBP4Q8N3X1 1017 aaPredicted RBP5.75□□□□□ -1.49
CCDC39-204ENST00000476379 NEK11Q8NG66 645 aa5.75□□□□□ -1.49
CCDC39-204ENST00000476379 CCDC94Q9BW85 323 aaPredicted RBP5.75□□□□□ -1.49
CCDC39-204ENST00000476379 TANGO6Q9C0B7 1094 aa5.75□□□□□ -1.49
CCDC39-204ENST00000476379 BLZF1Q9H2G9 400 aa5.75□□□□□ -1.49
CCDC39-204ENST00000476379 DDX19AQ9NUU7 478 aaKnown RBP5.75□□□□□ -1.49
CCDC39-204ENST00000476379 SLC12A7Q9Y666 1083 aa5.75□□□□□ -1.49
CCDC39-204ENST00000476379 ZNF142P52746 1687 aaPredicted RBP5.75□□□□□ -1.49
CCDC39-204ENST00000476379 SPTLC2O15270 562 aa5.74□□□□□ -1.49
CCDC39-204ENST00000476379 IARSP41252 1262 aaKnown RBP5.74□□□□□ -1.49
CCDC39-204ENST00000476379 ANAPC15P60006 121 aa5.74□□□□□ -1.49
CCDC39-204ENST00000476379 ARID5AQ03989 594 aa5.74□□□□□ -1.49
CCDC39-204ENST00000476379 GCKRQ14397 625 aa5.74□□□□□ -1.49
CCDC39-204ENST00000476379 TBC1D9BQ66K14 1250 aa5.74□□□□□ -1.49
CCDC39-204ENST00000476379 NBPF5PQ86XG9 351 aaPredicted RBP5.74□□□□□ -1.49
CCDC39-204ENST00000476379 MAGEB6Q8N7X4 407 aa5.74□□□□□ -1.49
CCDC39-204ENST00000476379 MYRIPQ8NFW9 859 aa5.74□□□□□ -1.49
CCDC39-204ENST00000476379 PGBD1Q96JS3 809 aa5.74□□□□□ -1.49
CCDC39-204ENST00000476379 MAP7D2Q96T17 732 aa5.74□□□□□ -1.49
CCDC39-204ENST00000476379 KCNF1Q9H3M0 494 aa5.74□□□□□ -1.49
CCDC39-204ENST00000476379 ZCCHC17Q9NP64 241 aaKnown RBP5.74□□□□□ -1.49
CCDC39-204ENST00000476379 RTCBQ9Y3I0 505 aaKnown RBP5.74□□□□□ -1.49
CCDC39-204ENST00000476379 TTC41PQ6P2S7 1318 aa5.74□□□□□ -1.49
CCDC39-204ENST00000476379 LAMC1P11047 1609 aa5.74□□□□□ -1.49
CCDC39-204ENST00000476379 CYP2D7A0A087X1C5 515 aa5.74□□□□□ -1.49
CCDC39-204ENST00000476379 ZMYND10O75800 440 aa5.74□□□□□ -1.49
CCDC39-204ENST00000476379 SDR42E1Q8WUS8 393 aa5.74□□□□□ -1.49
CCDC39-204ENST00000476379 BBXQ8WY36 941 aaPredicted RBP5.74□□□□□ -1.49
CCDC39-204ENST00000476379 MRPS27Q92552 414 aaKnown RBP5.74□□□□□ -1.49
CCDC39-204ENST00000476379 INTS4Q96HW7 963 aaKnown RBP5.74□□□□□ -1.49
CCDC39-204ENST00000476379 UTP3Q9NQZ2 479 aaKnown RBP eCLIP5.74□□□□□ -1.49
CCDC39-204ENST00000476379 CWC25Q9NXE8 425 aaPredicted RBP5.74□□□□□ -1.49
CCDC39-204ENST00000476379 EIF6P56537 245 aaKnown RBP5.74□□□□□ -1.49
CCDC39-204ENST00000476379 MTX1Q13505 466 aa5.74□□□□□ -1.49
CCDC39-204ENST00000476379 ZNF174Q15697 407 aa5.74□□□□□ -1.49
CCDC39-204ENST00000476379 WWC2Q6AWC2 1192 aa5.74□□□□□ -1.49
CCDC39-204ENST00000476379 CABP5Q9NP86 173 aa5.74□□□□□ -1.49
CCDC39-204ENST00000476379 PHLPP1O60346 1717 aa5.74□□□□□ -1.49
CCDC39-204ENST00000476379 NEURL1BA8MQ27 555 aa5.74□□□□□ -1.49
CCDC39-204ENST00000476379 FOXN1O15353 648 aa5.74□□□□□ -1.49
CCDC39-204ENST00000476379 RAD51AP2Q09MP3 1159 aa5.74□□□□□ -1.49
CCDC39-204ENST00000476379 TSR1Q2NL82 804 aaKnown RBP5.74□□□□□ -1.49
CCDC39-204ENST00000476379 TMCO3Q6UWJ1 677 aa5.74□□□□□ -1.49
CCDC39-204ENST00000476379 PPFIBP1Q86W92 1011 aa5.74□□□□□ -1.49
CCDC39-204ENST00000476379 GOLGA6L1Q8N7Z2 621 aa5.74□□□□□ -1.49
CCDC39-204ENST00000476379 STX8Q9UNK0 236 aa5.74□□□□□ -1.49
CCDC39-204ENST00000476379 FMN2Q9NZ56 1722 aa5.73□□□□□ -1.49
CCDC39-204ENST00000476379 CDK12Q9NYV4 1490 aaPredicted RBP5.73□□□□□ -1.49
CCDC39-204ENST00000476379 E7EWF7 191 aa5.73□□□□□ -1.49
CCDC39-204ENST00000476379 G3V3G9 751 aa5.73□□□□□ -1.49
CCDC39-204ENST00000476379 PRKAB2O43741 272 aa5.73□□□□□ -1.49
CCDC39-204ENST00000476379 ATP2C2O75185 946 aa5.73□□□□□ -1.49
CCDC39-204ENST00000476379 IGKV5-2P06315 115 aa5.73□□□□□ -1.49
CCDC39-204ENST00000476379 MMP10P09238 476 aa5.73□□□□□ -1.49
CCDC39-204ENST00000476379 IKQ13123 557 aaPredicted RBP5.73□□□□□ -1.49
CCDC39-204ENST00000476379 KRT32Q14532 448 aa5.73□□□□□ -1.49
CCDC39-204ENST00000476379 DCAF8Q5TAQ9 597 aa5.73□□□□□ -1.49
CCDC39-204ENST00000476379 SPTY2D1Q68D10 685 aaPredicted RBP5.73□□□□□ -1.49
CCDC39-204ENST00000476379 DHX32Q7L7V1 743 aaKnown RBP5.73□□□□□ -1.49
CCDC39-204ENST00000476379 NUP88Q99567 741 aaPredicted RBP5.73□□□□□ -1.49
CCDC39-204ENST00000476379 VPS16Q9H269 839 aa5.73□□□□□ -1.49
CCDC39-204ENST00000476379 MMRN2Q9H8L6 949 aa5.73□□□□□ -1.49
CCDC39-204ENST00000476379 POLR2DO15514 142 aaKnown RBP5.73□□□□□ -1.49
CCDC39-204ENST00000476379 GPAA1O43292 621 aa5.73□□□□□ -1.49
CCDC39-204ENST00000476379 ERFEQ4G0M1 354 aa5.73□□□□□ -1.49
CCDC39-204ENST00000476379 TRIM22Q8IYM9 498 aa5.73□□□□□ -1.49
CCDC39-204ENST00000476379 XAGE2Q96GT9 111 aa5.73□□□□□ -1.49
CCDC39-204ENST00000476379 IRX2Q9BZI1 471 aaPredicted RBP5.73□□□□□ -1.49
CCDC39-204ENST00000476379 GOLPH3LQ9H4A5 285 aa5.73□□□□□ -1.49
CCDC39-204ENST00000476379 ITSN1Q15811 1721 aa5.73□□□□□ -1.49
CCDC39-204ENST00000476379 MBD4O95243 580 aa5.73□□□□□ -1.49
CCDC39-204ENST00000476379 TFRCP02786 760 aaKnown RBP5.73□□□□□ -1.49
CCDC39-204ENST00000476379 IDEP14735 1019 aa5.73□□□□□ -1.49
CCDC39-204ENST00000476379 SUSD4Q5VX71 490 aa5.73□□□□□ -1.49
CCDC39-204ENST00000476379 TTC19Q6DKK2 380 aaPredicted RBP5.73□□□□□ -1.49
CCDC39-204ENST00000476379 DDX21Q9NR30 783 aaKnown RBP eCLIP5.73□□□□□ -1.49
CCDC39-204ENST00000476379 CCDC87Q9NVE4 849 aa5.73□□□□□ -1.49
CCDC39-204ENST00000476379 PCDHA7Q9UN72 937 aa5.73□□□□□ -1.49
CCDC39-204ENST00000476379 VWA3AA6NCI4 1184 aa5.72□□□□□ -1.49
CCDC39-204ENST00000476379 RBAK-RBAKDNI3L0D1 243 aa5.72□□□□□ -1.49
CCDC39-204ENST00000476379 M0R2C6 588 aa5.72□□□□□ -1.49
CCDC39-204ENST00000476379 ZNF202O95125 648 aa5.72□□□□□ -1.49
CCDC39-204ENST00000476379 CYP19A1P11511 503 aaPredicted RBP5.72□□□□□ -1.49
CCDC39-204ENST00000476379 MCM7P33993 719 aa5.72□□□□□ -1.49
CCDC39-204ENST00000476379 NR5A1Q13285 461 aa5.72□□□□□ -1.49
CCDC39-204ENST00000476379 TOB2Q14106 344 aaPredicted RBP5.72□□□□□ -1.49
CCDC39-204ENST00000476379 SCARF1Q14162 830 aa5.72□□□□□ -1.49
CCDC39-204ENST00000476379 PDIA6Q15084 440 aa5.72□□□□□ -1.49
CCDC39-204ENST00000476379 TRAPPC3LQ5T215 181 aa5.72□□□□□ -1.49
CCDC39-204ENST00000476379 PUS7LQ9H0K6 701 aaKnown RBP5.72□□□□□ -1.49
Retrieved 100 of 20,778 RNA–protein pairs in 26.9 ms