RNA–Protein interactions for RNA: ENST00000476215.5

PTCD3-211, Transcript of pentatricopeptide repeat domain 3, humanhuman

TSL 3

Gene PTCD3, Length 754 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCD3-211ENST00000476215 SRCIN1Q9C0H9 1055 aa8.36□□□□□ -1.07
PTCD3-211ENST00000476215 VTI1BQ9UEU0 232 aa8.36□□□□□ -1.07
PTCD3-211ENST00000476215 HMX2A2RU54 273 aa8.35□□□□□ -1.07
PTCD3-211ENST00000476215 ADH5P11766 374 aa8.35□□□□□ -1.07
PTCD3-211ENST00000476215 ITGAEP38570 1179 aa8.35□□□□□ -1.07
PTCD3-211ENST00000476215 FCGRTP55899 365 aa8.35□□□□□ -1.07
PTCD3-211ENST00000476215 C12orf50Q8NA57 414 aaPredicted RBP8.35□□□□□ -1.07
PTCD3-211ENST00000476215 ANKRD24Q8TF21 1146 aa8.35□□□□□ -1.07
PTCD3-211ENST00000476215 SCO2A0A1W2PP80 73 aa8.34□□□□□ -1.07
PTCD3-211ENST00000476215 GAS2O43903 313 aaKnown RBP8.34□□□□□ -1.07
PTCD3-211ENST00000476215 MAP4P27816 1152 aaKnown RBP8.34□□□□□ -1.07
PTCD3-211ENST00000476215 CD97P48960 835 aa8.34□□□□□ -1.07
PTCD3-211ENST00000476215 SGO2Q562F6 1265 aa8.34□□□□□ -1.07
PTCD3-211ENST00000476215 DTHD1Q6ZMT9 781 aa8.34□□□□□ -1.07
PTCD3-211ENST00000476215 C3orf58Q8NDZ4 430 aa8.34□□□□□ -1.07
PTCD3-211ENST00000476215 FAM8A1Q9UBU6 413 aa8.34□□□□□ -1.07
PTCD3-211ENST00000476215 PRR19A6NJB7 356 aa8.33□□□□□ -1.08
PTCD3-211ENST00000476215 KIAA1324LA8MWY0 1029 aaPredicted RBP8.33□□□□□ -1.08
PTCD3-211ENST00000476215 ECEL1O95672 775 aa8.33□□□□□ -1.08
PTCD3-211ENST00000476215 USP17L7P0C7H9 530 aa8.33□□□□□ -1.08
PTCD3-211ENST00000476215 GSTT1P30711 240 aa8.33□□□□□ -1.08
PTCD3-211ENST00000476215 CORO1BQ9BR76 489 aa8.33□□□□□ -1.08
PTCD3-211ENST00000476215 DRD2P14416 443 aa8.32□□□□□ -1.08
PTCD3-211ENST00000476215 MRPL58Q14197 206 aaKnown RBP8.32□□□□□ -1.08
PTCD3-211ENST00000476215 KRT82Q9NSB4 513 aa8.32□□□□□ -1.08
PTCD3-211ENST00000476215 AKAP2Q9Y2D5 859 aa8.32□□□□□ -1.08
PTCD3-211ENST00000476215 CPSF6Q16630 551 aaKnown RBP eCLIP8.31□□□□□ -1.08
PTCD3-211ENST00000476215 CDPF1Q6NVV7 123 aa8.31□□□□□ -1.08
PTCD3-211ENST00000476215 PDZD3Q86UT5 571 aa8.31□□□□□ -1.08
PTCD3-211ENST00000476215 WDR18Q9BV38 432 aa8.31□□□□□ -1.08
PTCD3-211ENST00000476215 KIAA1522Q9P206 1035 aaPredicted RBP8.31□□□□□ -1.08
PTCD3-211ENST00000476215 ACTL7BQ9Y614 415 aa8.31□□□□□ -1.08
PTCD3-211ENST00000476215 AOC2O75106 756 aa8.3□□□□□ -1.08
PTCD3-211ENST00000476215 TSNAXIP1Q2TAA8 658 aa8.3□□□□□ -1.08
PTCD3-211ENST00000476215 KCNF1Q9H3M0 494 aa8.3□□□□□ -1.08
PTCD3-211ENST00000476215 TMEM39AQ9NV64 488 aa8.3□□□□□ -1.08
PTCD3-211ENST00000476215 CACNA2D2Q9NY47 1150 aa8.3□□□□□ -1.08
PTCD3-211ENST00000476215 PPM1HQ9ULR3 514 aa8.3□□□□□ -1.08
PTCD3-211ENST00000476215 PCDHGC5Q9Y5F6 944 aa8.3□□□□□ -1.08
PTCD3-211ENST00000476215 KIR2DP1A0A0G2JNF4 349 aaPredicted RBP8.29□□□□□ -1.08
PTCD3-211ENST00000476215 E9PSI1 815 aa8.29□□□□□ -1.08
PTCD3-211ENST00000476215 TGFB1P01137 390 aa8.29□□□□□ -1.08
PTCD3-211ENST00000476215 CTSHP09668 335 aa8.29□□□□□ -1.08
PTCD3-211ENST00000476215 KIF4BQ2VIQ3 1234 aa8.29□□□□□ -1.08
PTCD3-211ENST00000476215 INTS5Q6P9B9 1019 aaKnown RBP8.29□□□□□ -1.08
PTCD3-211ENST00000476215 NPM2Q86SE8 214 aaKnown RBP8.29□□□□□ -1.08
PTCD3-211ENST00000476215 SHKBP1Q8TBC3 707 aa8.29□□□□□ -1.08
PTCD3-211ENST00000476215 CRELD1Q96HD1 420 aa8.29□□□□□ -1.08
PTCD3-211ENST00000476215 ACSS3Q9H6R3 686 aa8.29□□□□□ -1.08
PTCD3-211ENST00000476215 FAM95CA0A1B0GW59 222 aa8.28□□□□□ -1.08
PTCD3-211ENST00000476215 COBLO75128 1261 aa8.28□□□□□ -1.08
PTCD3-211ENST00000476215 MED26O95402 600 aa8.28□□□□□ -1.08
PTCD3-211ENST00000476215 GSTP1P09211 210 aaKnown RBP8.28□□□□□ -1.08
PTCD3-211ENST00000476215 SPINK2P20155 84 aa8.28□□□□□ -1.08
PTCD3-211ENST00000476215 VAMP1P23763 118 aa8.28□□□□□ -1.08
PTCD3-211ENST00000476215 PPP2R3AQ06190 1150 aa8.28□□□□□ -1.08
PTCD3-211ENST00000476215 GATA6Q92908 595 aa8.28□□□□□ -1.08
PTCD3-211ENST00000476215 YIPF2Q9BWQ6 316 aa8.28□□□□□ -1.08
PTCD3-211ENST00000476215 BACH2Q9BYV9 841 aa8.28□□□□□ -1.08
PTCD3-211ENST00000476215 CCDC86Q9H6F5 360 aaKnown RBP8.28□□□□□ -1.08
PTCD3-211ENST00000476215 TTF2Q9UNY4 1162 aaKnown RBP8.28□□□□□ -1.08
PTCD3-211ENST00000476215 MEI1Q5TIA1 1274 aa8.27□□□□□ -1.09
PTCD3-211ENST00000476215 PAOXQ6QHF9 649 aa8.27□□□□□ -1.09
PTCD3-211ENST00000476215 SEZ6L2Q6UXD5 910 aa8.27□□□□□ -1.09
PTCD3-211ENST00000476215 FBLIM1Q8WUP2 373 aa8.27□□□□□ -1.09
PTCD3-211ENST00000476215 NECAB3Q96P71 396 aaPredicted RBP8.27□□□□□ -1.09
PTCD3-211ENST00000476215 PRKAG2Q9UGJ0 569 aa8.27□□□□□ -1.09
PTCD3-211ENST00000476215 TMPRSS2O15393 492 aa8.26□□□□□ -1.09
PTCD3-211ENST00000476215 ZNF862O60290 1169 aa8.26□□□□□ -1.09
PTCD3-211ENST00000476215 FBXO24O75426 580 aa8.26□□□□□ -1.09
PTCD3-211ENST00000476215 RECKO95980 971 aa8.26□□□□□ -1.09
PTCD3-211ENST00000476215 F13BP05160 661 aa8.26□□□□□ -1.09
PTCD3-211ENST00000476215 USP11P51784 963 aa8.26□□□□□ -1.09
PTCD3-211ENST00000476215 ZNF252P-AS1Q0IIN9 211 aa8.26□□□□□ -1.09
PTCD3-211ENST00000476215 TPTE2Q6XPS3 522 aa8.26□□□□□ -1.09
PTCD3-211ENST00000476215 TMEM87AQ8NBN3 555 aa8.26□□□□□ -1.09
PTCD3-211ENST00000476215 FAM105AQ9NUU6 356 aa8.26□□□□□ -1.09
PTCD3-211ENST00000476215 CRIM1Q9NZV1 1036 aa8.26□□□□□ -1.09
PTCD3-211ENST00000476215 PPP1R9AQ9ULJ8 1098 aa8.26□□□□□ -1.09
PTCD3-211ENST00000476215 NME2P22392 152 aa8.25□□□□□ -1.09
PTCD3-211ENST00000476215 ZNF157P51786 506 aaPredicted RBP8.25□□□□□ -1.09
PTCD3-211ENST00000476215 TAF1CQ15572 869 aaPredicted RBP8.25□□□□□ -1.09
PTCD3-211ENST00000476215 AKAP4Q5JQC9 854 aa8.25□□□□□ -1.09
PTCD3-211ENST00000476215 DTX1Q86Y01 620 aa8.25□□□□□ -1.09
PTCD3-211ENST00000476215 STK35Q8TDR2 534 aa8.25□□□□□ -1.09
PTCD3-211ENST00000476215 SEMA6CQ9H3T2 930 aa8.25□□□□□ -1.09
PTCD3-211ENST00000476215 GPN3Q9UHW5 284 aaPredicted RBP8.25□□□□□ -1.09
PTCD3-211ENST00000476215 ARNTP27540 789 aa8.24□□□□□ -1.09
PTCD3-211ENST00000476215 RXRBP28702 533 aa8.24□□□□□ -1.09
PTCD3-211ENST00000476215 GRIK1P39086 918 aa8.24□□□□□ -1.09
PTCD3-211ENST00000476215 HNRNPUQ00839 825 aaKnown RBP eCLIP8.24□□□□□ -1.09
PTCD3-211ENST00000476215 MAP7Q14244 749 aa8.24□□□□□ -1.09
PTCD3-211ENST00000476215 PDE3AQ14432 1141 aa8.24□□□□□ -1.09
PTCD3-211ENST00000476215 SCARA3Q6AZY7 606 aa8.24□□□□□ -1.09
PTCD3-211ENST00000476215 ZAR1Q86SH2 424 aa8.24□□□□□ -1.09
PTCD3-211ENST00000476215 SULF2Q8IWU5 870 aa8.24□□□□□ -1.09
PTCD3-211ENST00000476215 WDR89Q96FK6 387 aaPredicted RBP8.24□□□□□ -1.09
PTCD3-211ENST00000476215 MFSD14AQ96MC6 490 aa8.24□□□□□ -1.09
PTCD3-211ENST00000476215 RAD18Q9NS91 495 aa8.24□□□□□ -1.09
PTCD3-211ENST00000476215 USP31Q70CQ4 1352 aa8.23□□□□□ -1.09
Retrieved 100 of 20,778 RNA–protein pairs in 39.5 ms