RNA–Protein interactions for RNA: ENST00000474828.1

SCAF11-206, Transcript of SR-related CTD associated factor 11, humanhuman

TSL 2

Gene SCAF11, Length 757 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAF11-206ENST00000474828 CNTNAP1P78357 1384 aa20.6■□□□□ 0.89
SCAF11-206ENST00000474828 CLRN2A0PK11 232 aa20.6■□□□□ 0.89
SCAF11-206ENST00000474828 GLRX3O76003 335 aaKnown RBP20.6■□□□□ 0.89
SCAF11-206ENST00000474828 PDE1AP54750 535 aa20.6■□□□□ 0.89
SCAF11-206ENST00000474828 FMR1Q06787 632 aaKnown RBP eCLIP20.6■□□□□ 0.896e-11■□□□□ 10.5
SCAF11-206ENST00000474828 TNFAIP1Q13829 316 aa20.6■□□□□ 0.89
SCAF11-206ENST00000474828 DEFB129Q9H1M3 183 aa20.6■□□□□ 0.89
SCAF11-206ENST00000474828 CREBZFQ9NS37 354 aa20.6■□□□□ 0.89
SCAF11-206ENST00000474828 TRPM7Q96QT4 1865 aa20.6■□□□□ 0.89
SCAF11-206ENST00000474828 MYO5AQ9Y4I1 1855 aaKnown RBP20.6■□□□□ 0.89
SCAF11-206ENST00000474828 GOLIM4O00461 696 aa20.59■□□□□ 0.89
SCAF11-206ENST00000474828 ERC2O15083 957 aa20.59■□□□□ 0.89
SCAF11-206ENST00000474828 MAP3K12Q12852 859 aa20.59■□□□□ 0.89
SCAF11-206ENST00000474828 NAA16Q6N069 864 aaPredicted RBP20.59■□□□□ 0.89
SCAF11-206ENST00000474828 DLK2Q6UY11 383 aa20.59■□□□□ 0.89
SCAF11-206ENST00000474828 ADGRA1Q86SQ6 560 aa20.59■□□□□ 0.89
SCAF11-206ENST00000474828 CDCA5Q96FF9 252 aa20.59■□□□□ 0.89
SCAF11-206ENST00000474828 TEPSINQ96N21 525 aa20.59■□□□□ 0.89
SCAF11-206ENST00000474828 LNPKQ9C0E8 428 aa20.59■□□□□ 0.89
SCAF11-206ENST00000474828 RPAP1Q9BWH6 1393 aaPredicted RBP20.59■□□□□ 0.89
SCAF11-206ENST00000474828 TCRBV5S4A2TA0A5A2 114 aa20.58■□□□□ 0.89
SCAF11-206ENST00000474828 TMEM88BA6NKF7 163 aa20.58■□□□□ 0.89
SCAF11-206ENST00000474828 TICAM2Q86XR7 235 aa20.58■□□□□ 0.89
SCAF11-206ENST00000474828 EDC3Q96F86 508 aaKnown RBP20.58■□□□□ 0.89
SCAF11-206ENST00000474828 WDHD1O75717 1129 aaPredicted RBP20.57■□□□□ 0.88
SCAF11-206ENST00000474828 IDH1O75874 414 aaKnown RBP20.57■□□□□ 0.88
SCAF11-206ENST00000474828 BTDP43251 543 aa20.57■□□□□ 0.88
SCAF11-206ENST00000474828 RASA3Q14644 834 aa20.57■□□□□ 0.88
SCAF11-206ENST00000474828 B4GALNT3Q6L9W6 998 aa20.57■□□□□ 0.88
SCAF11-206ENST00000474828 CERS3Q8IU89 383 aa20.57■□□□□ 0.88
SCAF11-206ENST00000474828 PLEKHM2Q8IWE5 1019 aa20.57■□□□□ 0.88
SCAF11-206ENST00000474828 DNAJC2Q99543 621 aaKnown RBP20.57■□□□□ 0.88
SCAF11-206ENST00000474828 ZBTB47Q9UFB7 747 aaPredicted RBP20.57■□□□□ 0.88
SCAF11-206ENST00000474828 SSC5DA1L4H1 1573 aa20.56■□□□□ 0.88
SCAF11-206ENST00000474828 PDE6AP16499 860 aa20.56■□□□□ 0.88
SCAF11-206ENST00000474828 FKBP1BP68106 108 aa20.56■□□□□ 0.88
SCAF11-206ENST00000474828 TSHZ3Q63HK5 1081 aa20.56■□□□□ 0.88
SCAF11-206ENST00000474828 KBTBD3Q8NAB2 608 aa20.56■□□□□ 0.88
SCAF11-206ENST00000474828 HHIPL1Q96JK4 782 aa20.56■□□□□ 0.88
SCAF11-206ENST00000474828 USP40Q9NVE5 1235 aa20.56■□□□□ 0.88
SCAF11-206ENST00000474828 FAM198AQ9UFP1 575 aa20.56■□□□□ 0.88
SCAF11-206ENST00000474828 COL2A1P02458 1487 aaPredicted RBP20.56■□□□□ 0.88
SCAF11-206ENST00000474828 ENTPD3O75355 529 aa20.55■□□□□ 0.88
SCAF11-206ENST00000474828 TNNI2P48788 182 aa20.55■□□□□ 0.88
SCAF11-206ENST00000474828 UBE3CQ15386 1083 aa20.55■□□□□ 0.88
SCAF11-206ENST00000474828 FAM151AQ8WW52 585 aa20.55■□□□□ 0.88
SCAF11-206ENST00000474828 VEZTQ9HBM0 779 aa20.55■□□□□ 0.88
SCAF11-206ENST00000474828 TMOD2Q9NZR1 351 aa20.55■□□□□ 0.88
SCAF11-206ENST00000474828 SCAF8Q9UPN6 1271 aaKnown RBP20.55■□□□□ 0.88
SCAF11-206ENST00000474828 CELF2O95319 508 aaKnown RBP20.54■□□□□ 0.88
SCAF11-206ENST00000474828 BAG3O95817 575 aa20.54■□□□□ 0.88
SCAF11-206ENST00000474828 CYP7A1P22680 504 aa20.54■□□□□ 0.88
SCAF11-206ENST00000474828 PDE4AP27815 886 aa20.54■□□□□ 0.88
SCAF11-206ENST00000474828 ADD2P35612 726 aa20.54■□□□□ 0.88
SCAF11-206ENST00000474828 NFIAQ12857 509 aa20.54■□□□□ 0.88
SCAF11-206ENST00000474828 MAP3K11Q16584 847 aa20.54■□□□□ 0.88
SCAF11-206ENST00000474828 SLC9C2Q5TAH2 1124 aa20.54■□□□□ 0.88
SCAF11-206ENST00000474828 CENPQQ7L2Z9 268 aaPredicted RBP20.54■□□□□ 0.88
SCAF11-206ENST00000474828 MAGEB6Q8N7X4 407 aa20.54■□□□□ 0.88
SCAF11-206ENST00000474828 JMYQ8N9B5 988 aa20.54■□□□□ 0.88
SCAF11-206ENST00000474828 RIOK1Q9BRS2 568 aaKnown RBP20.54■□□□□ 0.88
SCAF11-206ENST00000474828 TLL2Q9Y6L7 1015 aa20.54■□□□□ 0.88
SCAF11-206ENST00000474828 RASSF10A6NK89 507 aa20.53■□□□□ 0.88
SCAF11-206ENST00000474828 PLCG2P16885 1265 aa20.53■□□□□ 0.88
SCAF11-206ENST00000474828 CACNB3P54284 484 aa20.53■□□□□ 0.88
SCAF11-206ENST00000474828 SAPCD2Q86UD0 394 aa20.53■□□□□ 0.88
SCAF11-206ENST00000474828 DDX24Q9GZR7 859 aaKnown RBP eCLIP20.53■□□□□ 0.88
SCAF11-206ENST00000474828 ATRNL1Q5VV63 1379 aa20.53■□□□□ 0.88
SCAF11-206ENST00000474828 PAPPA2Q9BXP8 1791 aa20.53■□□□□ 0.88
SCAF11-206ENST00000474828 TCP10L2B9ZVM9 353 aa20.52■□□□□ 0.88
SCAF11-206ENST00000474828 NEFLP07196 543 aa20.52■□□□□ 0.88
SCAF11-206ENST00000474828 MAP3K10Q02779 954 aa20.52■□□□□ 0.88
SCAF11-206ENST00000474828 SUPT20HL1Q3ZLR7 823 aa20.52■□□□□ 0.88
SCAF11-206ENST00000474828 BCL11AQ9H165 835 aa20.52■□□□□ 0.88
SCAF11-206ENST00000474828 GBA2Q9HCG7 927 aaPredicted RBP20.52■□□□□ 0.88
SCAF11-206ENST00000474828 ZNF532Q9HCE3 1301 aa20.52■□□□□ 0.87
SCAF11-206ENST00000474828 UNCXA6NJT0 531 aa20.51■□□□□ 0.87
SCAF11-206ENST00000474828 NBPF12Q5TAG4 269 aaPredicted RBP20.51■□□□□ 0.87
SCAF11-206ENST00000474828 PRAMEF18Q5VWM3 479 aa20.51■□□□□ 0.87
SCAF11-206ENST00000474828 ZSCAN25Q6NSZ9 544 aa20.51■□□□□ 0.87
SCAF11-206ENST00000474828 TMEM39BQ9GZU3 492 aa20.51■□□□□ 0.87
SCAF11-206ENST00000474828 DDX4Q9NQI0 724 aaKnown RBP20.51■□□□□ 0.87
SCAF11-206ENST00000474828 AATFQ9NY61 560 aaKnown RBP eCLIP20.51■□□□□ 0.87
SCAF11-206ENST00000474828 ZFYP08048 801 aaPredicted RBP20.5■□□□□ 0.87
SCAF11-206ENST00000474828 RGS3P49796 1198 aa20.5■□□□□ 0.87
SCAF11-206ENST00000474828 LDLRAD1Q5T700 205 aa20.5■□□□□ 0.87
SCAF11-206ENST00000474828 CDAN1Q8IWY9 1227 aa20.5■□□□□ 0.87
SCAF11-206ENST00000474828 SH3RF3Q8TEJ3 882 aaPredicted RBP20.5■□□□□ 0.87
SCAF11-206ENST00000474828 FOCADQ5VW36 1801 aa20.49■□□□□ 0.87
SCAF11-206ENST00000474828 SH3BP5LQ7L8J4 393 aa20.49■□□□□ 0.87
SCAF11-206ENST00000474828 ZFPM1Q8IX07 1006 aa20.49■□□□□ 0.87
SCAF11-206ENST00000474828 C2orf69Q8N8R5 385 aa20.49■□□□□ 0.87
SCAF11-206ENST00000474828 EVI5LQ96CN4 794 aa20.49■□□□□ 0.87
SCAF11-206ENST00000474828 MKRN1Q9UHC7 482 aaKnown RBP20.49■□□□□ 0.87
SCAF11-206ENST00000474828 MYH7P12883 1935 aa20.49■□□□□ 0.87
SCAF11-206ENST00000474828 NF2P35240 595 aa20.48■□□□□ 0.87
SCAF11-206ENST00000474828 DYNLL1P63167 89 aaKnown RBP20.48■□□□□ 0.87
SCAF11-206ENST00000474828 NOL10Q9BSC4 688 aaKnown RBP20.48■□□□□ 0.87
SCAF11-206ENST00000474828 RNF113AO15541 343 aaKnown RBP20.47■□□□□ 0.87
SCAF11-206ENST00000474828 CHGBP05060 677 aa20.47■□□□□ 0.87
Retrieved 100 of 20,778 RNA–protein pairs in 38.9 ms