RNA–Protein interactions for RNA: ENST00000474048.1

PRPF38A-202, Transcript of pre-mRNA processing factor 38A, humanhuman

TSL 1 (best)

Gene PRPF38A, Length 1,059 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF38A-202ENST00000474048 SCNN1DP51172 638 aa12.22□□□□□ -0.45
PRPF38A-202ENST00000474048 FGD1P98174 961 aa12.22□□□□□ -0.45
PRPF38A-202ENST00000474048 DIXDC1Q155Q3 683 aa12.22□□□□□ -0.45
PRPF38A-202ENST00000474048 DACT2Q5SW24 774 aa12.22□□□□□ -0.45
PRPF38A-202ENST00000474048 CREB3L3Q68CJ9 461 aa12.22□□□□□ -0.45
PRPF38A-202ENST00000474048 RSBN1LQ6PCB5 846 aaPredicted RBP12.22□□□□□ -0.45
PRPF38A-202ENST00000474048 RALYLQ86SE5 291 aaKnown RBP12.22□□□□□ -0.45
PRPF38A-202ENST00000474048 TEX11Q8IYF3 940 aa12.22□□□□□ -0.45
PRPF38A-202ENST00000474048 STRBPQ96SI9 672 aaKnown RBP12.22□□□□□ -0.45
PRPF38A-202ENST00000474048 ZMYM6O95789 1325 aa12.21□□□□□ -0.45
PRPF38A-202ENST00000474048 PSMD14O00487 310 aa12.21□□□□□ -0.45
PRPF38A-202ENST00000474048 SLC27A2O14975 620 aa12.21□□□□□ -0.45
PRPF38A-202ENST00000474048 MYO1BO43795 1136 aa12.21□□□□□ -0.45
PRPF38A-202ENST00000474048 GRIN3BO60391 1043 aa12.21□□□□□ -0.45
PRPF38A-202ENST00000474048 HDLBPQ00341 1268 aaKnown RBP12.21□□□□□ -0.45
PRPF38A-202ENST00000474048 HHIPL2Q6UWX4 724 aa12.21□□□□□ -0.45
PRPF38A-202ENST00000474048 AGBL3Q8NEM8 1001 aa12.21□□□□□ -0.45
PRPF38A-202ENST00000474048 ATP8A2Q9NTI2 1148 aa12.21□□□□□ -0.45
PRPF38A-202ENST00000474048 SERPINA10Q9UK55 444 aa12.21□□□□□ -0.45
PRPF38A-202ENST00000474048 GJA3Q9Y6H8 435 aa12.21□□□□□ -0.45
PRPF38A-202ENST00000474048 SCN9AQ15858 1988 aa12.21□□□□□ -0.46
PRPF38A-202ENST00000474048 NAV1Q8NEY1 1877 aa12.21□□□□□ -0.46
PRPF38A-202ENST00000474048 LAMA4Q16363 1823 aa12.21□□□□□ -0.46
PRPF38A-202ENST00000474048 DICER1Q9UPY3 1922 aaKnown RBP12.2□□□□□ -0.46
PRPF38A-202ENST00000474048 YDJCA8MPS7 323 aa12.2□□□□□ -0.46
PRPF38A-202ENST00000474048 HMGB1P09429 215 aaKnown RBP12.2□□□□□ -0.46
PRPF38A-202ENST00000474048 RPS12P25398 132 aaKnown RBP12.2□□□□□ -0.46
PRPF38A-202ENST00000474048 CRKP46108 304 aa12.2□□□□□ -0.46
PRPF38A-202ENST00000474048 MMP14P50281 582 aa12.2□□□□□ -0.46
PRPF38A-202ENST00000474048 DYNLL1P63167 89 aaKnown RBP12.2□□□□□ -0.46
PRPF38A-202ENST00000474048 VPS53Q5VIR6 699 aa12.2□□□□□ -0.46
PRPF38A-202ENST00000474048 GIMAP6Q6P9H5 292 aa12.2□□□□□ -0.46
PRPF38A-202ENST00000474048 ADGRA1Q86SQ6 560 aa12.2□□□□□ -0.46
PRPF38A-202ENST00000474048 IFNL3Q8IZI9 196 aa12.2□□□□□ -0.46
PRPF38A-202ENST00000474048 JAKMIP1Q96N16 626 aaKnown RBP12.2□□□□□ -0.46
PRPF38A-202ENST00000474048 MXD3Q9BW11 206 aa12.2□□□□□ -0.46
PRPF38A-202ENST00000474048 RNF41Q9H4P4 317 aaPredicted RBP12.2□□□□□ -0.46
PRPF38A-202ENST00000474048 TOMM22Q9NS69 142 aa12.2□□□□□ -0.46
PRPF38A-202ENST00000474048 RNF181Q9P0P0 153 aa12.2□□□□□ -0.46
PRPF38A-202ENST00000474048 ARPP21Q9UBL0 812 aaPredicted RBP12.2□□□□□ -0.46
PRPF38A-202ENST00000474048 CYP46A1Q9Y6A2 500 aa12.2□□□□□ -0.46
PRPF38A-202ENST00000474048 TIAM2Q8IVF5 1701 aa12.2□□□□□ -0.46
PRPF38A-202ENST00000474048 GAKO14976 1311 aa12.19□□□□□ -0.46
PRPF38A-202ENST00000474048 GPR75-ASB3A0A0A6YYF3 556 aa12.19□□□□□ -0.46
PRPF38A-202ENST00000474048 HSP90AA1P07900 732 aaKnown RBP12.19□□□□□ -0.46
PRPF38A-202ENST00000474048 VIL1P09327 827 aaKnown RBP12.19□□□□□ -0.46
PRPF38A-202ENST00000474048 USP17L8P0C7I0 530 aa12.19□□□□□ -0.46
PRPF38A-202ENST00000474048 CASTP20810 708 aaKnown RBP12.19□□□□□ -0.46
PRPF38A-202ENST00000474048 NECTIN1Q15223 517 aa12.19□□□□□ -0.46
PRPF38A-202ENST00000474048 DLGAP5Q15398 846 aa12.19□□□□□ -0.46
PRPF38A-202ENST00000474048 BLOC1S2Q6QNY1 142 aa12.19□□□□□ -0.46
PRPF38A-202ENST00000474048 CERS5Q8N5B7 392 aa12.19□□□□□ -0.46
PRPF38A-202ENST00000474048 SDR42E1Q8WUS8 393 aa12.19□□□□□ -0.46
PRPF38A-202ENST00000474048 FAM163AQ96GL9 167 aaPredicted RBP12.19□□□□□ -0.46
PRPF38A-202ENST00000474048 RIOK1Q9BRS2 568 aaKnown RBP12.19□□□□□ -0.46
PRPF38A-202ENST00000474048 TRIM34Q9BYJ4 488 aa12.19□□□□□ -0.46
PRPF38A-202ENST00000474048 CNNM2Q9H8M5 875 aa12.19□□□□□ -0.46
PRPF38A-202ENST00000474048 KCNQ5Q9NR82 932 aa12.19□□□□□ -0.46
PRPF38A-202ENST00000474048 DAGLAQ9Y4D2 1042 aa12.19□□□□□ -0.46
PRPF38A-202ENST00000474048 SNX14Q9Y5W7 946 aa12.19□□□□□ -0.46
PRPF38A-202ENST00000474048 LAMB1P07942 1786 aa12.19□□□□□ -0.46
PRPF38A-202ENST00000474048 MINDY4BA8MYZ0 360 aa12.18□□□□□ -0.46
PRPF38A-202ENST00000474048 FGAP02671 866 aa12.18□□□□□ -0.46
PRPF38A-202ENST00000474048 POLR3DP05423 398 aaPredicted RBP12.18□□□□□ -0.46
PRPF38A-202ENST00000474048 MCM2P49736 904 aa12.18□□□□□ -0.46
PRPF38A-202ENST00000474048 NEK4P51957 841 aa12.18□□□□□ -0.46
PRPF38A-202ENST00000474048 PPP4CP60510 307 aa12.18□□□□□ -0.46
PRPF38A-202ENST00000474048 HAND2P61296 217 aa12.18□□□□□ -0.46
PRPF38A-202ENST00000474048 CXCL9Q07325 125 aa12.18□□□□□ -0.46
PRPF38A-202ENST00000474048 ALX1Q15699 326 aa12.18□□□□□ -0.46
PRPF38A-202ENST00000474048 GRIK5Q16478 980 aa12.18□□□□□ -0.46
PRPF38A-202ENST00000474048 SH3RF3Q8TEJ3 882 aaPredicted RBP12.18□□□□□ -0.46
PRPF38A-202ENST00000474048 TGFBRAP1Q8WUH2 860 aa12.18□□□□□ -0.46
PRPF38A-202ENST00000474048 MRIQ9BWK5 157 aa12.18□□□□□ -0.46
PRPF38A-202ENST00000474048 ZNF287Q9HBT7 754 aa12.18□□□□□ -0.46
PRPF38A-202ENST00000474048 USP40Q9NVE5 1235 aa12.18□□□□□ -0.46
PRPF38A-202ENST00000474048 MCM9Q9NXL9 1143 aa12.18□□□□□ -0.46
PRPF38A-202ENST00000474048 ECM29Q5VYK3 1845 aa12.18□□□□□ -0.46
PRPF38A-202ENST00000474048 GSG1L2A8MUP6 293 aa12.17□□□□□ -0.46
PRPF38A-202ENST00000474048 PRKAB2O43741 272 aa12.17□□□□□ -0.46
PRPF38A-202ENST00000474048 HLA-DOAP06340 250 aa12.17□□□□□ -0.46
PRPF38A-202ENST00000474048 LMOD1P29536 600 aaPredicted RBP12.17□□□□□ -0.46
PRPF38A-202ENST00000474048 PICALMQ13492 652 aa12.17□□□□□ -0.46
PRPF38A-202ENST00000474048 ANKRD1Q15327 319 aa12.17□□□□□ -0.46
PRPF38A-202ENST00000474048 CFAP100Q494V2 611 aa12.17□□□□□ -0.46
PRPF38A-202ENST00000474048 DPY19L2Q6NUT2 758 aa12.17□□□□□ -0.46
PRPF38A-202ENST00000474048 MFSD6Q6ZSS7 791 aa12.17□□□□□ -0.46
PRPF38A-202ENST00000474048 NCOA7Q8NI08 942 aa12.17□□□□□ -0.46
PRPF38A-202ENST00000474048 ZDHHC15Q96MV8 337 aa12.17□□□□□ -0.46
PRPF38A-202ENST00000474048 NEK1Q96PY6 1258 aa12.17□□□□□ -0.46
PRPF38A-202ENST00000474048 KRT23Q9C075 422 aa12.17□□□□□ -0.46
PRPF38A-202ENST00000474048 PALD1Q9ULE6 856 aa12.17□□□□□ -0.46
PRPF38A-202ENST00000474048 ZNF646O15015 1829 aaPredicted RBP12.16□□□□□ -0.46
PRPF38A-202ENST00000474048 BAZ2AQ9UIF9 1905 aaKnown RBP12.16□□□□□ -0.46
PRPF38A-202ENST00000474048 H7C1D1 291 aa12.16□□□□□ -0.46
PRPF38A-202ENST00000474048 CYP21A2P08686 494 aa12.16□□□□□ -0.46
PRPF38A-202ENST00000474048 PCP11498 1178 aaKnown RBP12.16□□□□□ -0.46
PRPF38A-202ENST00000474048 YBX3P16989 372 aaKnown RBP eCLIP12.16□□□□□ -0.465e-7■□□□□ 8.6
PRPF38A-202ENST00000474048 PDE4BQ07343 736 aa12.16□□□□□ -0.46
PRPF38A-202ENST00000474048 PPARAQ07869 468 aa12.16□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 10 ms