RNA–Protein interactions for RNA: ENST00000473639.1

RND3-208, Transcript of Rho family GTPase 3, human

TSL 2

Gene RND3, Length 432 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
RND3-208	ENST00000473639	FBF1	Q8TES7	1133 aa		4.92	□□□□□ -1.62
RND3-208	ENST00000473639	TGIF2	Q9GZN2	237 aa		4.92	□□□□□ -1.62
RND3-208	ENST00000473639	NRSN2	Q9GZP1	204 aa		4.92	□□□□□ -1.62
RND3-208	ENST00000473639	CLEC4M	Q9H2X3	399 aa	Predicted RBP	4.92	□□□□□ -1.62
RND3-208	ENST00000473639	KCNF1	Q9H3M0	494 aa		4.92	□□□□□ -1.62
RND3-208	ENST00000473639	NLRP2	Q9NX02	1062 aa		4.92	□□□□□ -1.62
RND3-208	ENST00000473639	ZCCHC6	Q5VYS8	1495 aa	Known RBP	4.92	□□□□□ -1.62
RND3-208	ENST00000473639	EIF1AY	O14602	144 aa	Known RBP	4.91	□□□□□ -1.62
RND3-208	ENST00000473639	GSC2	O15499	205 aa		4.91	□□□□□ -1.62
RND3-208	ENST00000473639	GAS2	O43903	313 aa	Known RBP	4.91	□□□□□ -1.62
RND3-208	ENST00000473639	CTSB	P07858	339 aa		4.91	□□□□□ -1.62
RND3-208	ENST00000473639	DRD2	P14416	443 aa		4.91	□□□□□ -1.62
RND3-208	ENST00000473639	NCL	P19338	710 aa	Known RBP	4.91	□□□□□ -1.62
RND3-208	ENST00000473639	MAP4	P27816	1152 aa	Known RBP	4.91	□□□□□ -1.62
RND3-208	ENST00000473639	ENOX2	Q16206	610 aa	Known RBP	4.91	□□□□□ -1.62
RND3-208	ENST00000473639	LCE1D	Q5T752	114 aa		4.91	□□□□□ -1.62
RND3-208	ENST00000473639	SMG8	Q8ND04	991 aa	Known RBP	4.91	□□□□□ -1.62
RND3-208	ENST00000473639	CCDC74A	Q96AQ1	378 aa		4.91	□□□□□ -1.62
RND3-208	ENST00000473639	TANGO6	Q9C0B7	1094 aa		4.91	□□□□□ -1.62
RND3-208	ENST00000473639	EHD4	Q9H223	541 aa		4.91	□□□□□ -1.62
RND3-208	ENST00000473639	PCMTD2	Q9NV79	361 aa		4.91	□□□□□ -1.62
RND3-208	ENST00000473639	PNMA6F	A0A0J9YX94	578 aa		4.9	□□□□□ -1.63
RND3-208	ENST00000473639	PRR19	A6NJB7	356 aa		4.9	□□□□□ -1.63
RND3-208	ENST00000473639	TIAF1	O95411	115 aa		4.9	□□□□□ -1.63
RND3-208	ENST00000473639	ECEL1	O95672	775 aa		4.9	□□□□□ -1.63
RND3-208	ENST00000473639	MAOB	P27338	520 aa		4.9	□□□□□ -1.63
RND3-208	ENST00000473639	GNA15	P30679	374 aa		4.9	□□□□□ -1.63
RND3-208	ENST00000473639	CD97	P48960	835 aa		4.9	□□□□□ -1.63
RND3-208	ENST00000473639	EXOSC6	Q5RKV6	272 aa	Known RBP	4.9	□□□□□ -1.63
RND3-208	ENST00000473639	C9orf131	Q5VYM1	1079 aa		4.9	□□□□□ -1.63
RND3-208	ENST00000473639	KRTAP19-1	Q8IUB9	90 aa		4.9	□□□□□ -1.63
RND3-208	ENST00000473639	SLC43A3	Q8NBI5	491 aa		4.9	□□□□□ -1.63
RND3-208	ENST00000473639	SHKBP1	Q8TBC3	707 aa		4.9	□□□□□ -1.63
RND3-208	ENST00000473639	SPATA32	Q96LK8	384 aa		4.9	□□□□□ -1.63
RND3-208	ENST00000473639	DBNDD2	Q9BQY9	259 aa		4.9	□□□□□ -1.63
RND3-208	ENST00000473639	ZNF576	Q9H609	170 aa		4.9	□□□□□ -1.63
RND3-208	ENST00000473639	SUGCT	Q9HAC7	445 aa		4.9	□□□□□ -1.63
RND3-208	ENST00000473639	CYP4F12	Q9HCS2	524 aa		4.9	□□□□□ -1.63
RND3-208	ENST00000473639	SPG7	Q9UQ90	795 aa		4.9	□□□□□ -1.63
RND3-208	ENST00000473639	HIF3A	Q9Y2N7	669 aa		4.9	□□□□□ -1.63
RND3-208	ENST00000473639	COBL	O75128	1261 aa		4.89	□□□□□ -1.63
RND3-208	ENST00000473639	ATP2B1	P20020	1258 aa		4.89	□□□□□ -1.63
RND3-208	ENST00000473639	ITPKA	P23677	461 aa		4.89	□□□□□ -1.63
RND3-208	ENST00000473639	RXRB	P28702	533 aa		4.89	□□□□□ -1.63
RND3-208	ENST00000473639	FANCC	Q00597	558 aa		4.89	□□□□□ -1.63
RND3-208	ENST00000473639	CDPF1	Q6NVV7	123 aa		4.89	□□□□□ -1.63
RND3-208	ENST00000473639	EPS8L3	Q8TE67	593 aa	Known RBP	4.89	□□□□□ -1.63
RND3-208	ENST00000473639	ARMC5	Q96C12	935 aa		4.89	□□□□□ -1.63
RND3-208	ENST00000473639	CRELD1	Q96HD1	420 aa		4.89	□□□□□ -1.63
RND3-208	ENST00000473639	FAM161B	Q96MY7	647 aa		4.89	□□□□□ -1.63
RND3-208	ENST00000473639	CSRNP1	Q96S65	589 aa		4.89	□□□□□ -1.63
RND3-208	ENST00000473639	TRIM56	Q9BRZ2	755 aa	Known RBP	4.89	□□□□□ -1.63
RND3-208	ENST00000473639	DNAJC25	Q9H1X3	360 aa		4.89	□□□□□ -1.63
RND3-208	ENST00000473639	ABCB6	Q9NP58	842 aa		4.89	□□□□□ -1.63
RND3-208	ENST00000473639	SMARCA5	O60264	1052 aa	Predicted RBP	4.88	□□□□□ -1.63
RND3-208	ENST00000473639	GADD45B	O75293	160 aa	Predicted RBP	4.88	□□□□□ -1.63
RND3-208	ENST00000473639	B3GALT4	O96024	378 aa		4.88	□□□□□ -1.63
RND3-208	ENST00000473639	CYP11A1	P05108	521 aa		4.88	□□□□□ -1.63
RND3-208	ENST00000473639	SOX4	Q06945	474 aa	Predicted RBP	4.88	□□□□□ -1.63
RND3-208	ENST00000473639	RAD51AP2	Q09MP3	1159 aa		4.88	□□□□□ -1.63
RND3-208	ENST00000473639	GRM2	Q14416	872 aa		4.88	□□□□□ -1.63
RND3-208	ENST00000473639	POU4F3	Q15319	338 aa		4.88	□□□□□ -1.63
RND3-208	ENST00000473639	METTL16	Q86W50	562 aa	Known RBP	4.88	□□□□□ -1.63
RND3-208	ENST00000473639	VPS37D	Q86XT2	251 aa		4.88	□□□□□ -1.63
RND3-208	ENST00000473639	SHISA5	Q8N114	240 aa		4.88	□□□□□ -1.63
RND3-208	ENST00000473639	C2CD4A	Q8NCU7	369 aa	Predicted RBP	4.88	□□□□□ -1.63
RND3-208	ENST00000473639	FBLIM1	Q8WUP2	373 aa		4.88	□□□□□ -1.63
RND3-208	ENST00000473639	MFSD14A	Q96MC6	490 aa		4.88	□□□□□ -1.63
RND3-208	ENST00000473639	CAPN10	Q9HC96	672 aa		4.88	□□□□□ -1.63
RND3-208	ENST00000473639	TMEM238L	A0A1B0GVL6	79 aa		4.87	□□□□□ -1.63
RND3-208	ENST00000473639	FAM95C	A0A1B0GW59	222 aa		4.87	□□□□□ -1.63
RND3-208	ENST00000473639	WDR64	B1ANS9	1081 aa		4.87	□□□□□ -1.63
RND3-208	ENST00000473639	GIPC1	O14908	333 aa		4.87	□□□□□ -1.63
RND3-208	ENST00000473639	F13B	P05160	661 aa		4.87	□□□□□ -1.63
RND3-208	ENST00000473639	ADH5	P11766	374 aa		4.87	□□□□□ -1.63
RND3-208	ENST00000473639	EIF4B	P23588	611 aa	Known RBP	4.87	□□□□□ -1.63
RND3-208	ENST00000473639	USP11	P51784	963 aa		4.87	□□□□□ -1.63
RND3-208	ENST00000473639	ZNF157	P51786	506 aa	Predicted RBP	4.87	□□□□□ -1.63
RND3-208	ENST00000473639	FAAP100	Q0VG06	881 aa		4.87	□□□□□ -1.63
RND3-208	ENST00000473639	NFKBIB	Q15653	356 aa		4.87	□□□□□ -1.63
RND3-208	ENST00000473639	SOGA3	Q5TF21	947 aa		4.87	□□□□□ -1.63
RND3-208	ENST00000473639	PRPF40B	Q6NWY9	871 aa	Known RBP	4.87	□□□□□ -1.63
RND3-208	ENST00000473639	PI16	Q6UXB8	463 aa		4.87	□□□□□ -1.63
RND3-208	ENST00000473639	NOP9	Q86U38	636 aa	Known RBP	4.87	□□□□□ -1.63
RND3-208	ENST00000473639	PRKAG2	Q9UGJ0	569 aa		4.87	□□□□□ -1.63
RND3-208	ENST00000473639	AK5	Q9Y6K8	562 aa		4.87	□□□□□ -1.63
RND3-208	ENST00000473639	DCAF1	Q9Y4B6	1507 aa		4.87	□□□□□ -1.63
RND3-208	ENST00000473639	KIAA1324L	A8MWY0	1029 aa	Predicted RBP	4.86	□□□□□ -1.63
RND3-208	ENST00000473639	EIF4EBP3	O60516	100 aa	Predicted RBP	4.86	□□□□□ -1.63
RND3-208	ENST00000473639	ADAMTS4	O75173	837 aa		4.86	□□□□□ -1.63
RND3-208	ENST00000473639	AKAP4	Q5JQC9	854 aa		4.86	□□□□□ -1.63
RND3-208	ENST00000473639	LDLRAD1	Q5T700	205 aa		4.86	□□□□□ -1.63
RND3-208	ENST00000473639	ZNF654	Q8IZM8	581 aa		4.86	□□□□□ -1.63
RND3-208	ENST00000473639	FBXL6	Q8N531	539 aa		4.86	□□□□□ -1.63
RND3-208	ENST00000473639	GLIS3	Q8NEA6	775 aa		4.86	□□□□□ -1.63
RND3-208	ENST00000473639	CORO1B	Q9BR76	489 aa		4.86	□□□□□ -1.63
RND3-208	ENST00000473639	TINF2	Q9BSI4	451 aa		4.86	□□□□□ -1.63
RND3-208	ENST00000473639	WWC3	Q9ULE0	1092 aa		4.86	□□□□□ -1.63
RND3-208	ENST00000473639	EPB41L3	Q9Y2J2	1087 aa	Predicted RBP	4.86	□□□□□ -1.63
RND3-208	ENST00000473639	ACTL7B	Q9Y614	415 aa		4.86	□□□□□ -1.63

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