RNA–Protein interactions for RNA: ENST00000472442.2

SCAMP4-207, Transcript of secretory carrier membrane protein 4, humanhuman

TSL 2

Gene SCAMP4, Length 2,973 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAMP4-207ENST00000472442 RASGRF1Q13972 1273 aa15.4■□□□□ 0.06
SCAMP4-207ENST00000472442 GOLGA6L19H0YKK7 550 aa15.4■□□□□ 0.06
SCAMP4-207ENST00000472442 GPAA1O43292 621 aa15.4■□□□□ 0.06
SCAMP4-207ENST00000472442 FGAP02671 866 aa15.4■□□□□ 0.06
SCAMP4-207ENST00000472442 TTF1Q15361 905 aaPredicted RBP15.4■□□□□ 0.06
SCAMP4-207ENST00000472442 SF3B3Q15393 1217 aaKnown RBP15.4■□□□□ 0.06
SCAMP4-207ENST00000472442 NYAP1Q6ZVC0 841 aa15.4■□□□□ 0.06
SCAMP4-207ENST00000472442 DHX32Q7L7V1 743 aaKnown RBP15.4■□□□□ 0.06
SCAMP4-207ENST00000472442 TRMT1Q9NXH9 659 aaKnown RBP15.4■□□□□ 0.06
SCAMP4-207ENST00000472442 TAF1P21675 1872 aa15.4■□□□□ 0.06
SCAMP4-207ENST00000472442 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP15.39■□□□□ 0.05
SCAMP4-207ENST00000472442 RGL2O15211 777 aa15.39■□□□□ 0.05
SCAMP4-207ENST00000472442 IDH1O75874 414 aaKnown RBP15.39■□□□□ 0.05
SCAMP4-207ENST00000472442 SKILP12757 684 aa15.39■□□□□ 0.05
SCAMP4-207ENST00000472442 SPATA5Q8NB90 893 aa15.39■□□□□ 0.05
SCAMP4-207ENST00000472442 DDX24Q9GZR7 859 aaKnown RBP eCLIP15.39■□□□□ 0.05
SCAMP4-207ENST00000472442 ST7Q9NRC1 585 aa15.39■□□□□ 0.05
SCAMP4-207ENST00000472442 WWC3Q9ULE0 1092 aa15.39■□□□□ 0.05
SCAMP4-207ENST00000472442 SBF2Q86WG5 1849 aa15.39■□□□□ 0.05
SCAMP4-207ENST00000472442 CCDC66A2RUB6 948 aa15.39■□□□□ 0.05
SCAMP4-207ENST00000472442 ERICH4A6NGS2 130 aa15.39■□□□□ 0.05
SCAMP4-207ENST00000472442 WTIPA6NIX2 430 aaPredicted RBP15.39■□□□□ 0.05
SCAMP4-207ENST00000472442 BCAMP50895 628 aa15.39■□□□□ 0.05
SCAMP4-207ENST00000472442 RBM6P78332 1123 aaKnown RBP15.39■□□□□ 0.05
SCAMP4-207ENST00000472442 C11orf57Q6ZUT1 292 aaPredicted RBP15.39■□□□□ 0.05
SCAMP4-207ENST00000472442 BRF1Q92994 677 aa15.39■□□□□ 0.05
SCAMP4-207ENST00000472442 CASZ1Q86V15 1759 aa15.39■□□□□ 0.05
SCAMP4-207ENST00000472442 LY75O60449 1722 aa15.39■□□□□ 0.05
SCAMP4-207ENST00000472442 ATRNO75882 1429 aa15.39■□□□□ 0.05
SCAMP4-207ENST00000472442 TCRBV5S4A2TA0A5A2 114 aa15.39■□□□□ 0.05
SCAMP4-207ENST00000472442 HMGB1P09429 215 aaKnown RBP15.39■□□□□ 0.05
SCAMP4-207ENST00000472442 PDIA4P13667 645 aaKnown RBP15.39■□□□□ 0.05
SCAMP4-207ENST00000472442 FILIP1Q7Z7B0 1213 aa15.39■□□□□ 0.05
SCAMP4-207ENST00000472442 ZNF532Q9HCE3 1301 aa15.38■□□□□ 0.05
SCAMP4-207ENST00000472442 IQCB1Q15051 598 aa15.38■□□□□ 0.05
SCAMP4-207ENST00000472442 UBE3CQ15386 1083 aa15.38■□□□□ 0.05
SCAMP4-207ENST00000472442 SLC10A5Q5PT55 438 aa15.38■□□□□ 0.05
SCAMP4-207ENST00000472442 SEPT12Q8IYM1 358 aa15.38■□□□□ 0.05
SCAMP4-207ENST00000472442 ARHGEF1Q92888 912 aaKnown RBP15.38■□□□□ 0.05
SCAMP4-207ENST00000472442 ERO1AQ96HE7 468 aa15.38■□□□□ 0.05
SCAMP4-207ENST00000472442 AGXT2Q9BYV1 514 aa15.38■□□□□ 0.05
SCAMP4-207ENST00000472442 TAF1LQ8IZX4 1826 aa15.38■□□□□ 0.05
SCAMP4-207ENST00000472442 CCDC69A6NI79 296 aa15.38■□□□□ 0.05
SCAMP4-207ENST00000472442 NPHP1O15259 732 aa15.38■□□□□ 0.05
SCAMP4-207ENST00000472442 PDE6AP16499 860 aa15.38■□□□□ 0.05
SCAMP4-207ENST00000472442 HAND2P61296 217 aa15.38■□□□□ 0.05
SCAMP4-207ENST00000472442 GTF3C6Q969F1 213 aa15.38■□□□□ 0.05
SCAMP4-207ENST00000472442 CDC5LQ99459 802 aaKnown RBP15.38■□□□□ 0.05
SCAMP4-207ENST00000472442 SARM1Q6SZW1 724 aa15.37■□□□□ 0.05
SCAMP4-207ENST00000472442 CHST3Q7LGC8 479 aa15.37■□□□□ 0.05
SCAMP4-207ENST00000472442 MRFAP1L1Q96HT8 127 aa15.37■□□□□ 0.05
SCAMP4-207ENST00000472442 FAM53CQ9NYF3 392 aa15.37■□□□□ 0.05
SCAMP4-207ENST00000472442 RTCBQ9Y3I0 505 aaKnown RBP15.37■□□□□ 0.05
SCAMP4-207ENST00000472442 NEMFO60524 1076 aa15.37■□□□□ 0.05
SCAMP4-207ENST00000472442 CCZ1BP86790 482 aa15.36■□□□□ 0.05
SCAMP4-207ENST00000472442 CCZ1P86791 482 aaPredicted RBP15.36■□□□□ 0.05
SCAMP4-207ENST00000472442 CELF1Q92879 486 aaKnown RBP15.36■□□□□ 0.05
SCAMP4-207ENST00000472442 SETDB2Q96T68 719 aa15.36■□□□□ 0.05
SCAMP4-207ENST00000472442 TRPC5Q9UL62 973 aaPredicted RBP15.36■□□□□ 0.05
SCAMP4-207ENST00000472442 ZPR1O75312 459 aa15.36■□□□□ 0.05
SCAMP4-207ENST00000472442 SCRN1Q12765 414 aa15.36■□□□□ 0.05
SCAMP4-207ENST00000472442 ANKRD18AQ8IVF6 992 aa15.36■□□□□ 0.05
SCAMP4-207ENST00000472442 CCDC24Q8N4L8 307 aa15.36■□□□□ 0.05
SCAMP4-207ENST00000472442 COL24A1Q17RW2 1714 aa15.36■□□□□ 0.05
SCAMP4-207ENST00000472442 A0A087WWV3 80 aa15.36■□□□□ 0.05
SCAMP4-207ENST00000472442 JAK2O60674 1132 aa15.36■□□□□ 0.05
SCAMP4-207ENST00000472442 SLU7O95391 586 aaKnown RBP15.36■□□□□ 0.05
SCAMP4-207ENST00000472442 CAVIN2O95810 425 aa15.36■□□□□ 0.05
SCAMP4-207ENST00000472442 IRX5P78411 483 aaPredicted RBP15.36■□□□□ 0.05
SCAMP4-207ENST00000472442 IMMTQ16891 758 aaKnown RBP15.36■□□□□ 0.05
SCAMP4-207ENST00000472442 DDX11Q96FC9 970 aa15.36■□□□□ 0.05
SCAMP4-207ENST00000472442 LRRC4BQ9NT99 713 aa15.36■□□□□ 0.05
SCAMP4-207ENST00000472442 BSDC1Q9NW68 430 aaPredicted RBP15.36■□□□□ 0.05
SCAMP4-207ENST00000472442 CEBPZQ03701 1054 aaKnown RBP15.35■□□□□ 0.05
SCAMP4-207ENST00000472442 APOBRQ0VD83 1088 aa15.35■□□□□ 0.05
SCAMP4-207ENST00000472442 CCAR2Q8N163 923 aaKnown RBP15.35■□□□□ 0.05
SCAMP4-207ENST00000472442 ZNF446Q9NWS9 450 aa15.35■□□□□ 0.05
SCAMP4-207ENST00000472442 DOCK2Q92608 1830 aa15.35■□□□□ 0.05
SCAMP4-207ENST00000472442 A0A1B0GUL6 1792 aa15.35■□□□□ 0.05
SCAMP4-207ENST00000472442 NBPF3Q9H094 633 aa15.35■□□□□ 0.05
SCAMP4-207ENST00000472442 MINPP1Q9UNW1 487 aa15.35■□□□□ 0.05
SCAMP4-207ENST00000472442 VGLL3A8MV65 326 aa15.34■□□□□ 0.05
SCAMP4-207ENST00000472442 BECN2A8MW95 431 aa15.34■□□□□ 0.05
SCAMP4-207ENST00000472442 PFKFB2O60825 505 aa15.34■□□□□ 0.05
SCAMP4-207ENST00000472442 NBPF5PQ86XG9 351 aaPredicted RBP15.34■□□□□ 0.05
SCAMP4-207ENST00000472442 TIGD1Q96MW7 591 aa15.34■□□□□ 0.05
SCAMP4-207ENST00000472442 C4BP0C0L5 1744 aa15.34■□□□□ 0.05
SCAMP4-207ENST00000472442 CDK11BP21127 795 aaKnown RBP15.34■□□□□ 0.05
SCAMP4-207ENST00000472442 RESTQ13127 1097 aa15.34■□□□□ 0.05
SCAMP4-207ENST00000472442 STX1AQ16623 288 aa15.34■□□□□ 0.05
SCAMP4-207ENST00000472442 MAGEB6Q8N7X4 407 aa15.34■□□□□ 0.05
SCAMP4-207ENST00000472442 NYXQ9GZU5 481 aa15.34■□□□□ 0.05
SCAMP4-207ENST00000472442 GPHNQ9NQX3 736 aaPredicted RBP15.34■□□□□ 0.05
SCAMP4-207ENST00000472442 NKX2-3Q8TAU0 364 aa15.33■□□□□ 0.05
SCAMP4-207ENST00000472442 STRBPQ96SI9 672 aaKnown RBP15.33■□□□□ 0.05
SCAMP4-207ENST00000472442 C4AP0C0L4 1744 aa15.33■□□□□ 0.04
SCAMP4-207ENST00000472442 MB21D2Q8IYB1 491 aaPredicted RBP15.33■□□□□ 0.04
SCAMP4-207ENST00000472442 FBXL16Q8N461 479 aa15.33■□□□□ 0.04
SCAMP4-207ENST00000472442 DENND2AQ9ULE3 1009 aa15.33■□□□□ 0.04
SCAMP4-207ENST00000472442 IQSEC3Q9UPP2 1182 aaPredicted RBP15.33■□□□□ 0.04
Retrieved 100 of 20,778 RNA–protein pairs in 49.6 ms