RNA–Protein interactions for RNA: ENST00000471307.6

CCDC39-202, Transcript of coiled-coil domain containing 39, humanhuman

TSL 3

Gene CCDC39, Length 783 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC39-202ENST00000471307 C12orf49Q9H741 205 aa10.18□□□□□ -0.78
CCDC39-202ENST00000471307 WWC3Q9ULE0 1092 aa10.18□□□□□ -0.78
CCDC39-202ENST00000471307 AP4E1Q9UPM8 1137 aa10.18□□□□□ -0.78
CCDC39-202ENST00000471307 HYAL3O43820 417 aaPredicted RBP10.17□□□□□ -0.78
CCDC39-202ENST00000471307 SLFN14P0C7P3 912 aa10.17□□□□□ -0.78
CCDC39-202ENST00000471307 NME2P22392 152 aa10.17□□□□□ -0.78
CCDC39-202ENST00000471307 CD97P48960 835 aa10.17□□□□□ -0.78
CCDC39-202ENST00000471307 KIF4BQ2VIQ3 1234 aa10.17□□□□□ -0.78
CCDC39-202ENST00000471307 INTS5Q6P9B9 1019 aaKnown RBP10.17□□□□□ -0.78
CCDC39-202ENST00000471307 PDZD3Q86UT5 571 aa10.17□□□□□ -0.78
CCDC39-202ENST00000471307 SULF2Q8IWU5 870 aa10.17□□□□□ -0.78
CCDC39-202ENST00000471307 SETDB2Q96T68 719 aa10.17□□□□□ -0.78
CCDC39-202ENST00000471307 CCDC86Q9H6F5 360 aaKnown RBP10.17□□□□□ -0.78
CCDC39-202ENST00000471307 COBLO75128 1261 aa10.16□□□□□ -0.78
CCDC39-202ENST00000471307 PRPF40AO75400 957 aaKnown RBP10.16□□□□□ -0.78
CCDC39-202ENST00000471307 GRIK1P39086 918 aa10.16□□□□□ -0.78
CCDC39-202ENST00000471307 MAP7Q14244 749 aa10.16□□□□□ -0.78
CCDC39-202ENST00000471307 DYMQ7RTS9 669 aa10.16□□□□□ -0.78
CCDC39-202ENST00000471307 SHKBP1Q8TBC3 707 aa10.16□□□□□ -0.78
CCDC39-202ENST00000471307 NECAB3Q96P71 396 aaPredicted RBP10.16□□□□□ -0.78
CCDC39-202ENST00000471307 SAMM50Q9Y512 469 aa10.16□□□□□ -0.78
CCDC39-202ENST00000471307 ANKRD33BA6NCL7 494 aa10.15□□□□□ -0.78
CCDC39-202ENST00000471307 TGFB1P01137 390 aa10.15□□□□□ -0.78
CCDC39-202ENST00000471307 ARNTP27540 789 aa10.15□□□□□ -0.78
CCDC39-202ENST00000471307 NFKBIBQ15653 356 aa10.15□□□□□ -0.78
CCDC39-202ENST00000471307 ACSS3Q9H6R3 686 aa10.15□□□□□ -0.78
CCDC39-202ENST00000471307 FAM105AQ9NUU6 356 aa10.15□□□□□ -0.78
CCDC39-202ENST00000471307 PRR19A6NJB7 356 aa10.14□□□□□ -0.79
CCDC39-202ENST00000471307 GNA15P30679 374 aa10.14□□□□□ -0.79
CCDC39-202ENST00000471307 ASPAP45381 313 aa10.14□□□□□ -0.79
CCDC39-202ENST00000471307 MFSD14AQ96MC6 490 aa10.14□□□□□ -0.79
CCDC39-202ENST00000471307 METTL22Q9BUU2 404 aaPredicted RBP10.14□□□□□ -0.79
CCDC39-202ENST00000471307 TMPRSS2O15393 492 aa10.13□□□□□ -0.79
CCDC39-202ENST00000471307 ZNF862O60290 1169 aa10.13□□□□□ -0.79
CCDC39-202ENST00000471307 LIG1P18858 919 aa10.13□□□□□ -0.79
CCDC39-202ENST00000471307 SCARA3Q6AZY7 606 aa10.13□□□□□ -0.79
CCDC39-202ENST00000471307 NBPF11Q86T75 865 aa10.13□□□□□ -0.79
CCDC39-202ENST00000471307 ATXN3LQ9H3M9 355 aa10.13□□□□□ -0.79
CCDC39-202ENST00000471307 SEMA6CQ9H3T2 930 aa10.13□□□□□ -0.79
CCDC39-202ENST00000471307 PCMTD2Q9NV79 361 aa10.13□□□□□ -0.79
CCDC39-202ENST00000471307 CRIM1Q9NZV1 1036 aa10.13□□□□□ -0.79
CCDC39-202ENST00000471307 PPP1R9AQ9ULJ8 1098 aa10.13□□□□□ -0.79
CCDC39-202ENST00000471307 KIAA1324LA8MWY0 1029 aaPredicted RBP10.12□□□□□ -0.79
CCDC39-202ENST00000471307 WDR64B1ANS9 1081 aa10.12□□□□□ -0.79
CCDC39-202ENST00000471307 RAB6AP20340 208 aa10.12□□□□□ -0.79
CCDC39-202ENST00000471307 ID3Q02535 119 aa10.12□□□□□ -0.79
CCDC39-202ENST00000471307 ZNF252P-AS1Q0IIN9 211 aa10.12□□□□□ -0.79
CCDC39-202ENST00000471307 EAPPQ56P03 285 aaPredicted RBP10.12□□□□□ -0.79
CCDC39-202ENST00000471307 TPTE2Q6XPS3 522 aa10.12□□□□□ -0.79
CCDC39-202ENST00000471307 ZC3H12CQ9C0D7 883 aaKnown RBP10.12□□□□□ -0.79
CCDC39-202ENST00000471307 ATG3Q9NT62 314 aa10.12□□□□□ -0.79
CCDC39-202ENST00000471307 PRKAG2Q9UGJ0 569 aa10.12□□□□□ -0.79
CCDC39-202ENST00000471307 PCDHGC5Q9Y5F6 944 aa10.12□□□□□ -0.79
CCDC39-202ENST00000471307 ENC1O14682 589 aa10.11□□□□□ -0.79
CCDC39-202ENST00000471307 NFICP08651 508 aa10.11□□□□□ -0.79
CCDC39-202ENST00000471307 DNAJC14Q6Y2X3 702 aaPredicted RBP10.11□□□□□ -0.79
CCDC39-202ENST00000471307 ZAR1Q86SH2 424 aa10.11□□□□□ -0.79
CCDC39-202ENST00000471307 KCNB2Q92953 911 aa10.11□□□□□ -0.79
CCDC39-202ENST00000471307 WDR89Q96FK6 387 aaPredicted RBP10.11□□□□□ -0.79
CCDC39-202ENST00000471307 CACNA2D2Q9NY47 1150 aa10.11□□□□□ -0.79
CCDC39-202ENST00000471307 F13BP05160 661 aa10.1□□□□□ -0.79
CCDC39-202ENST00000471307 USP17L7P0C7H9 530 aa10.1□□□□□ -0.79
CCDC39-202ENST00000471307 EIF4BP23588 611 aaKnown RBP10.1□□□□□ -0.79
CCDC39-202ENST00000471307 SSTR4P31391 388 aa10.1□□□□□ -0.79
CCDC39-202ENST00000471307 STK35Q8TDR2 534 aa10.1□□□□□ -0.79
CCDC39-202ENST00000471307 TBC1D32Q96NH3 1257 aa10.1□□□□□ -0.79
CCDC39-202ENST00000471307 PIM2Q9P1W9 311 aa10.1□□□□□ -0.79
CCDC39-202ENST00000471307 ERCC3P19447 782 aa10.09□□□□□ -0.79
CCDC39-202ENST00000471307 LRRC14Q15048 493 aa10.09□□□□□ -0.79
CCDC39-202ENST00000471307 FANCD2OSQ96PS1 177 aa10.09□□□□□ -0.79
CCDC39-202ENST00000471307 OSBPL1AQ9BXW6 950 aa10.09□□□□□ -0.79
CCDC39-202ENST00000471307 BMP6P22004 513 aa10.08□□□□□ -0.8
CCDC39-202ENST00000471307 CYP27A1Q02318 531 aa10.08□□□□□ -0.8
CCDC39-202ENST00000471307 MAP1SQ66K74 1059 aaPredicted RBP10.08□□□□□ -0.8
CCDC39-202ENST00000471307 SEZ6L2Q6UXD5 910 aa10.08□□□□□ -0.8
CCDC39-202ENST00000471307 SV2BQ7L1I2 683 aa10.08□□□□□ -0.8
CCDC39-202ENST00000471307 NPAS4Q8IUM7 802 aa10.08□□□□□ -0.8
CCDC39-202ENST00000471307 FBXL6Q8N531 539 aa10.08□□□□□ -0.8
CCDC39-202ENST00000471307 GATA6Q92908 595 aa10.08□□□□□ -0.8
CCDC39-202ENST00000471307 PIDD1Q9HB75 910 aa10.08□□□□□ -0.8
CCDC39-202ENST00000471307 CBX8Q9HC52 389 aa10.08□□□□□ -0.8
CCDC39-202ENST00000471307 CYP8B1Q9UNU6 501 aa10.08□□□□□ -0.8
CCDC39-202ENST00000471307 LEMD3Q9Y2U8 911 aa10.08□□□□□ -0.8
CCDC39-202ENST00000471307 AK5Q9Y6K8 562 aa10.08□□□□□ -0.8
CCDC39-202ENST00000471307 TRIM37O94972 964 aa10.07□□□□□ -0.8
CCDC39-202ENST00000471307 ERVK-24P63145 666 aa10.07□□□□□ -0.8
CCDC39-202ENST00000471307 FOSL1P15407 271 aa10.06□□□□□ -0.8
CCDC39-202ENST00000471307 SPINK2P20155 84 aa10.06□□□□□ -0.8
CCDC39-202ENST00000471307 ZC3H12AQ5D1E8 599 aaKnown RBP10.06□□□□□ -0.8
CCDC39-202ENST00000471307 DTX1Q86Y01 620 aa10.06□□□□□ -0.8
CCDC39-202ENST00000471307 DUSP9Q99956 384 aaKnown RBP10.06□□□□□ -0.8
CCDC39-202ENST00000471307 DISC1Q9NRI5 854 aa10.06□□□□□ -0.8
CCDC39-202ENST00000471307 DAGLAQ9Y4D2 1042 aa10.06□□□□□ -0.8
CCDC39-202ENST00000471307 FBXO24O75426 580 aa10.05□□□□□ -0.8
CCDC39-202ENST00000471307 PAGE1O75459 146 aa10.05□□□□□ -0.8
CCDC39-202ENST00000471307 MED26O95402 600 aa10.05□□□□□ -0.8
CCDC39-202ENST00000471307 ADMP35318 185 aa10.05□□□□□ -0.8
CCDC39-202ENST00000471307 CCDC27Q2M243 656 aa10.05□□□□□ -0.8
CCDC39-202ENST00000471307 LLGL2Q6P1M3 1020 aa10.05□□□□□ -0.8
CCDC39-202ENST00000471307 SMYD4Q8IYR2 804 aaPredicted RBP10.05□□□□□ -0.8
Retrieved 100 of 20,778 RNA–protein pairs in 17.4 ms