RNA–Protein interactions for RNA: ENST00000470170.1

COL11A1-208, Transcript of collagen type XI alpha 1 chain, humanhuman

TSL 2

Gene COL11A1, Length 785 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL11A1-208ENST00000470170 FMR1Q06787 632 aaKnown RBP eCLIP10.07□□□□□ -0.8
COL11A1-208ENST00000470170 GIMAP7Q8NHV1 300 aa10.07□□□□□ -0.8
COL11A1-208ENST00000470170 TBC1D32Q96NH3 1257 aa10.07□□□□□ -0.8
COL11A1-208ENST00000470170 ASB16Q96NS5 453 aa10.07□□□□□ -0.8
COL11A1-208ENST00000470170 SEMA6CQ9H3T2 930 aa10.07□□□□□ -0.8
COL11A1-208ENST00000470170 TMEM39AQ9NV64 488 aa10.07□□□□□ -0.8
COL11A1-208ENST00000470170 PIM2Q9P1W9 311 aa10.07□□□□□ -0.8
COL11A1-208ENST00000470170 GSTP1P09211 210 aaKnown RBP10.06□□□□□ -0.8
COL11A1-208ENST00000470170 XRCC5P13010 732 aaKnown RBP10.06□□□□□ -0.8
COL11A1-208ENST00000470170 OSBPL1AQ9BXW6 950 aa10.06□□□□□ -0.8
COL11A1-208ENST00000470170 GSX1Q9H4S2 264 aaPredicted RBP10.06□□□□□ -0.8
COL11A1-208ENST00000470170 ACSS3Q9H6R3 686 aa10.06□□□□□ -0.8
COL11A1-208ENST00000470170 KIR2DP1A0A0G2JNF4 349 aaPredicted RBP10.05□□□□□ -0.8
COL11A1-208ENST00000470170 ADAMTS4O75173 837 aa10.05□□□□□ -0.8
COL11A1-208ENST00000470170 PPP2R3AQ06190 1150 aa10.05□□□□□ -0.8
COL11A1-208ENST00000470170 MAP7Q14244 749 aa10.05□□□□□ -0.8
COL11A1-208ENST00000470170 ZAR1Q86SH2 424 aa10.05□□□□□ -0.8
COL11A1-208ENST00000470170 STK35Q8TDR2 534 aa10.05□□□□□ -0.8
COL11A1-208ENST00000470170 WWC3Q9ULE0 1092 aa10.05□□□□□ -0.8
COL11A1-208ENST00000470170 LEMD3Q9Y2U8 911 aa10.05□□□□□ -0.8
COL11A1-208ENST00000470170 TMPRSS2O15393 492 aa10.04□□□□□ -0.8
COL11A1-208ENST00000470170 ZNF862O60290 1169 aa10.04□□□□□ -0.8
COL11A1-208ENST00000470170 DTX1Q86Y01 620 aa10.04□□□□□ -0.8
COL11A1-208ENST00000470170 C3orf58Q8NDZ4 430 aa10.04□□□□□ -0.8
COL11A1-208ENST00000470170 GATA6Q92908 595 aa10.04□□□□□ -0.8
COL11A1-208ENST00000470170 LGR6Q9HBX8 967 aa10.04□□□□□ -0.8
COL11A1-208ENST00000470170 DAGLAQ9Y4D2 1042 aa10.04□□□□□ -0.8
COL11A1-208ENST00000470170 FAM170BA6NMN3 283 aa10.03□□□□□ -0.8
COL11A1-208ENST00000470170 DYNC1LI2O43237 492 aaPredicted RBP10.03□□□□□ -0.8
COL11A1-208ENST00000470170 PDZD3Q86UT5 571 aa10.03□□□□□ -0.8
COL11A1-208ENST00000470170 SULF2Q8IWU5 870 aa10.03□□□□□ -0.8
COL11A1-208ENST00000470170 FBF1Q8TES7 1133 aa10.03□□□□□ -0.8
COL11A1-208ENST00000470170 KCNB2Q92953 911 aa10.03□□□□□ -0.8
COL11A1-208ENST00000470170 SYNGAP1Q96PV0 1343 aa10.03□□□□□ -0.8
COL11A1-208ENST00000470170 OSBPL7Q9BZF2 842 aa10.02□□□□□ -0.81
COL11A1-208ENST00000470170 KRT82Q9NSB4 513 aa10.02□□□□□ -0.81
COL11A1-208ENST00000470170 CRIM1Q9NZV1 1036 aa10.02□□□□□ -0.81
COL11A1-208ENST00000470170 FOSL1P15407 271 aa10.01□□□□□ -0.81
COL11A1-208ENST00000470170 ID3Q02535 119 aa10.01□□□□□ -0.81
COL11A1-208ENST00000470170 KIF4BQ2VIQ3 1234 aa10.01□□□□□ -0.81
COL11A1-208ENST00000470170 METTL22Q9BUU2 404 aaPredicted RBP10.01□□□□□ -0.81
COL11A1-208ENST00000470170 KRTAP4-8Q9BYQ9 185 aa10.01□□□□□ -0.81
COL11A1-208ENST00000470170 PCDHGC5Q9Y5F6 944 aa10.01□□□□□ -0.81
COL11A1-208ENST00000470170 P4HBP07237 508 aaKnown RBP10□□□□□ -0.81
COL11A1-208ENST00000470170 SLFN14P0C7P3 912 aa10□□□□□ -0.81
COL11A1-208ENST00000470170 GSTT1P30711 240 aa10□□□□□ -0.81
COL11A1-208ENST00000470170 GP2P55259 537 aaKnown RBP10□□□□□ -0.81
COL11A1-208ENST00000470170 CPSF6Q16630 551 aaKnown RBP eCLIP10□□□□□ -0.81
COL11A1-208ENST00000470170 ALG1LQ6GMV1 187 aa10□□□□□ -0.81
COL11A1-208ENST00000470170 SEZ6L2Q6UXD5 910 aa10□□□□□ -0.81
COL11A1-208ENST00000470170 TPTE2Q6XPS3 522 aa10□□□□□ -0.81
COL11A1-208ENST00000470170 FANCD2OSQ96PS1 177 aa10□□□□□ -0.81
COL11A1-208ENST00000470170 PSMG3-AS1Q96PY0 264 aa10□□□□□ -0.81
COL11A1-208ENST00000470170 C1GALT1Q9NS00 363 aa10□□□□□ -0.81
COL11A1-208ENST00000470170 OAS3Q9Y6K5 1087 aaKnown RBP10□□□□□ -0.81
COL11A1-208ENST00000470170 FBXO24O75426 580 aa9.99□□□□□ -0.81
COL11A1-208ENST00000470170 ATP2B2Q01814 1243 aa9.99□□□□□ -0.81
COL11A1-208ENST00000470170 ZNF765Q7L2R6 523 aa9.99□□□□□ -0.81
COL11A1-208ENST00000470170 CYP26A1O43174 497 aa9.98□□□□□ -0.81
COL11A1-208ENST00000470170 NME2P22392 152 aa9.98□□□□□ -0.81
COL11A1-208ENST00000470170 ARNTP27540 789 aa9.98□□□□□ -0.81
COL11A1-208ENST00000470170 MSMPQ1L6U9 139 aa9.98□□□□□ -0.81
COL11A1-208ENST00000470170 MAP1SQ66K74 1059 aaPredicted RBP9.98□□□□□ -0.81
COL11A1-208ENST00000470170 NECAB3Q96P71 396 aaPredicted RBP9.98□□□□□ -0.81
COL11A1-208ENST00000470170 SRCIN1Q9C0H9 1055 aa9.98□□□□□ -0.81
COL11A1-208ENST00000470170 ATXN3LQ9H3M9 355 aa9.98□□□□□ -0.81
COL11A1-208ENST00000470170 PIDD1Q9HB75 910 aa9.98□□□□□ -0.81
COL11A1-208ENST00000470170 DISC1Q9NRI5 854 aa9.98□□□□□ -0.81
COL11A1-208ENST00000470170 CBX8Q9HC52 389 aa9.97□□□□□ -0.81
COL11A1-208ENST00000470170 PATL2C9JE40 543 aaKnown RBP9.96□□□□□ -0.82
COL11A1-208ENST00000470170 ENC1O14682 589 aa9.96□□□□□ -0.82
COL11A1-208ENST00000470170 PAGE1O75459 146 aa9.96□□□□□ -0.82
COL11A1-208ENST00000470170 WNT11O96014 354 aa9.96□□□□□ -0.82
COL11A1-208ENST00000470170 HCLS1P14317 486 aaPredicted RBP9.96□□□□□ -0.82
COL11A1-208ENST00000470170 HNRNPUQ00839 825 aaKnown RBP eCLIP9.96□□□□□ -0.82
COL11A1-208ENST00000470170 TTLL4Q14679 1199 aa9.96□□□□□ -0.82
COL11A1-208ENST00000470170 DUSP27Q5VZP5 1158 aa9.96□□□□□ -0.82
COL11A1-208ENST00000470170 MPRIPQ6WCQ1 1025 aa9.96□□□□□ -0.82
COL11A1-208ENST00000470170 LRRC4CQ9HCJ2 640 aa9.96□□□□□ -0.82
COL11A1-208ENST00000470170 SPG7Q9UQ90 795 aa9.96□□□□□ -0.82
COL11A1-208ENST00000470170 LDHBP07195 334 aaKnown RBP9.95□□□□□ -0.82
COL11A1-208ENST00000470170 ZNF252P-AS1Q0IIN9 211 aa9.95□□□□□ -0.82
COL11A1-208ENST00000470170 GRIN3AQ8TCU5 1115 aa9.95□□□□□ -0.82
COL11A1-208ENST00000470170 GPBAR1Q8TDU6 330 aa9.95□□□□□ -0.82
COL11A1-208ENST00000470170 EMILIN2Q9BXX0 1053 aa9.95□□□□□ -0.82
COL11A1-208ENST00000470170 PPM1HQ9ULR3 514 aa9.95□□□□□ -0.82
COL11A1-208ENST00000470170 GIPC1O14908 333 aa9.94□□□□□ -0.82
COL11A1-208ENST00000470170 RNGTTO60942 597 aaKnown RBP9.94□□□□□ -0.82
COL11A1-208ENST00000470170 CYP27A1Q02318 531 aa9.94□□□□□ -0.82
COL11A1-208ENST00000470170 CDK5R2Q13319 367 aa9.94□□□□□ -0.82
COL11A1-208ENST00000470170 AEBP1Q8IUX7 1158 aa9.94□□□□□ -0.82
COL11A1-208ENST00000470170 SMYD4Q8IYR2 804 aaPredicted RBP9.94□□□□□ -0.82
COL11A1-208ENST00000470170 ACSBG1Q96GR2 724 aa9.94□□□□□ -0.82
COL11A1-208ENST00000470170 CEP44Q9C0F1 390 aa9.94□□□□□ -0.82
COL11A1-208ENST00000470170 C12orf49Q9H741 205 aa9.94□□□□□ -0.82
COL11A1-208ENST00000470170 USP17L7P0C7H9 530 aa9.93□□□□□ -0.82
COL11A1-208ENST00000470170 BMP6P22004 513 aa9.93□□□□□ -0.82
COL11A1-208ENST00000470170 MCTP1Q6DN14 999 aa9.93□□□□□ -0.82
COL11A1-208ENST00000470170 NEFMP07197 916 aa9.92□□□□□ -0.82
COL11A1-208ENST00000470170 ZC3H12AQ5D1E8 599 aaKnown RBP9.92□□□□□ -0.82
Retrieved 100 of 20,778 RNA–protein pairs in 24.7 ms