RNA–Protein interactions for RNA: ENST00000469713.1

VPS8-220, Transcript of VPS8, CORVET complex subunit, humanhuman

TSL 3

Gene VPS8, Length 668 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS8-220ENST00000469713 KCNB2Q92953 911 aa6.59□□□□□ -1.35
VPS8-220ENST00000469713 GAL3ST3Q96A11 431 aa6.59□□□□□ -1.35
VPS8-220ENST00000469713 CORO1BQ9BR76 489 aa6.59□□□□□ -1.35
VPS8-220ENST00000469713 MIR1-1HGQ9H1L0 117 aa6.59□□□□□ -1.35
VPS8-220ENST00000469713 KCNQ5Q9NR82 932 aa6.59□□□□□ -1.35
VPS8-220ENST00000469713 PTPN11Q06124 597 aaPredicted RBP6.58□□□□□ -1.36
VPS8-220ENST00000469713 BNC2Q6ZN30 1099 aaPredicted RBP6.58□□□□□ -1.36
VPS8-220ENST00000469713 TRIM42Q8IWZ5 723 aa6.58□□□□□ -1.36
VPS8-220ENST00000469713 UBASH3BQ8TF42 649 aa6.58□□□□□ -1.36
VPS8-220ENST00000469713 JARID2Q92833 1246 aaPredicted RBP6.58□□□□□ -1.36
VPS8-220ENST00000469713 EAF1Q96JC9 268 aaPredicted RBP6.58□□□□□ -1.36
VPS8-220ENST00000469713 CCDC86Q9H6F5 360 aaKnown RBP6.58□□□□□ -1.36
VPS8-220ENST00000469713 SUPT16HQ9Y5B9 1047 aaKnown RBP6.58□□□□□ -1.36
VPS8-220ENST00000469713 CNTNAP5Q8WYK1 1306 aa6.57□□□□□ -1.36
VPS8-220ENST00000469713 LOC100289279A0A1B0GTE1 492 aa6.57□□□□□ -1.36
VPS8-220ENST00000469713 DLL1O00548 723 aa6.57□□□□□ -1.36
VPS8-220ENST00000469713 EIF4EBP3O60516 100 aaPredicted RBP6.57□□□□□ -1.36
VPS8-220ENST00000469713 GREM1O60565 184 aa6.57□□□□□ -1.36
VPS8-220ENST00000469713 TRIM37O94972 964 aa6.57□□□□□ -1.36
VPS8-220ENST00000469713 F13A1P00488 732 aa6.57□□□□□ -1.36
VPS8-220ENST00000469713 GJA8P48165 433 aa6.57□□□□□ -1.36
VPS8-220ENST00000469713 GPRASP2Q96D09 838 aa6.57□□□□□ -1.36
VPS8-220ENST00000469713 SPDYE3A6NKU9 549 aa6.56□□□□□ -1.36
VPS8-220ENST00000469713 TLR3O15455 904 aaKnown RBP6.56□□□□□ -1.36
VPS8-220ENST00000469713 WISP1O95388 367 aa6.56□□□□□ -1.36
VPS8-220ENST00000469713 DLGAP3O95886 979 aa6.56□□□□□ -1.36
VPS8-220ENST00000469713 IGHA1P01876 353 aa6.56□□□□□ -1.36
VPS8-220ENST00000469713 CRKP46108 304 aa6.56□□□□□ -1.36
VPS8-220ENST00000469713 TRIM28Q13263 835 aaKnown RBP6.56□□□□□ -1.36
VPS8-220ENST00000469713 GNL2Q13823 731 aaKnown RBP6.56□□□□□ -1.36
VPS8-220ENST00000469713 PDE3AQ14432 1141 aa6.56□□□□□ -1.36
VPS8-220ENST00000469713 FAM196AQ6ZSG2 479 aa6.56□□□□□ -1.36
VPS8-220ENST00000469713 SLC43A3Q8NBI5 491 aa6.56□□□□□ -1.36
VPS8-220ENST00000469713 FBXO27Q8NI29 283 aa6.56□□□□□ -1.36
VPS8-220ENST00000469713 GPBAR1Q8TDU6 330 aa6.56□□□□□ -1.36
VPS8-220ENST00000469713 CACNA2D2Q9NY47 1150 aa6.56□□□□□ -1.36
VPS8-220ENST00000469713 UBP1Q9NZI7 540 aa6.56□□□□□ -1.36
VPS8-220ENST00000469713 FAM221AA4D161 298 aa6.55□□□□□ -1.36
VPS8-220ENST00000469713 PIK3R2O00459 728 aa6.55□□□□□ -1.36
VPS8-220ENST00000469713 ZNF862O60290 1169 aa6.55□□□□□ -1.36
VPS8-220ENST00000469713 LIG1P18858 919 aa6.55□□□□□ -1.36
VPS8-220ENST00000469713 DNAJA1P31689 397 aaKnown RBP6.55□□□□□ -1.36
VPS8-220ENST00000469713 DUOXA2Q1HG44 320 aa6.55□□□□□ -1.36
VPS8-220ENST00000469713 PDZRN4Q6ZMN7 1036 aaPredicted RBP6.55□□□□□ -1.36
VPS8-220ENST00000469713 PODNQ7Z5L7 613 aa6.55□□□□□ -1.36
VPS8-220ENST00000469713 CCDC84Q86UT8 332 aaPredicted RBP6.55□□□□□ -1.36
VPS8-220ENST00000469713 RASGRP4Q8TDF6 673 aa6.55□□□□□ -1.36
VPS8-220ENST00000469713 DCAF11Q8TEB1 546 aa6.55□□□□□ -1.36
VPS8-220ENST00000469713 SREK1Q8WXA9 508 aaKnown RBP6.55□□□□□ -1.36
VPS8-220ENST00000469713 GATAD2BQ8WXI9 593 aa6.55□□□□□ -1.36
VPS8-220ENST00000469713 WDR89Q96FK6 387 aaPredicted RBP6.55□□□□□ -1.36
VPS8-220ENST00000469713 ACSBG1Q96GR2 724 aa6.55□□□□□ -1.36
VPS8-220ENST00000469713 NT5C1AQ9BXI3 368 aa6.55□□□□□ -1.36
VPS8-220ENST00000469713 KRT82Q9NSB4 513 aa6.55□□□□□ -1.36
VPS8-220ENST00000469713 IGSF3O75054 1194 aa6.54□□□□□ -1.36
VPS8-220ENST00000469713 CILPO75339 1184 aa6.54□□□□□ -1.36
VPS8-220ENST00000469713 ELNP15502 786 aa6.54□□□□□ -1.36
VPS8-220ENST00000469713 SELPP16109 830 aa6.54□□□□□ -1.36
VPS8-220ENST00000469713 CDK8P49336 464 aa6.54□□□□□ -1.36
VPS8-220ENST00000469713 APOBRQ0VD83 1088 aa6.54□□□□□ -1.36
VPS8-220ENST00000469713 SCARA3Q6AZY7 606 aa6.54□□□□□ -1.36
VPS8-220ENST00000469713 BEND7Q8N7W2 519 aaPredicted RBP6.54□□□□□ -1.36
VPS8-220ENST00000469713 USP35Q9P2H5 1018 aa6.54□□□□□ -1.36
VPS8-220ENST00000469713 PCDHA4Q9UN74 947 aa6.54□□□□□ -1.36
VPS8-220ENST00000469713 ARID5AQ03989 594 aa6.53□□□□□ -1.36
VPS8-220ENST00000469713 GRIK4Q16099 956 aa6.53□□□□□ -1.36
VPS8-220ENST00000469713 SEZ6Q53EL9 994 aa6.53□□□□□ -1.36
VPS8-220ENST00000469713 PRRT3Q5FWE3 981 aa6.53□□□□□ -1.36
VPS8-220ENST00000469713 SHISA2Q6UWI4 295 aa6.53□□□□□ -1.36
VPS8-220ENST00000469713 KIAA1211Q6ZU35 1233 aa6.53□□□□□ -1.36
VPS8-220ENST00000469713 ACAD11Q709F0 780 aa6.53□□□□□ -1.36
VPS8-220ENST00000469713 NKD1Q969G9 470 aa6.53□□□□□ -1.36
VPS8-220ENST00000469713 RUSC1Q9BVN2 902 aa6.53□□□□□ -1.36
VPS8-220ENST00000469713 LRRC3Q9BY71 257 aa6.53□□□□□ -1.36
VPS8-220ENST00000469713 GINM1Q9NU53 330 aa6.53□□□□□ -1.36
VPS8-220ENST00000469713 NOP53Q9NZM5 478 aaKnown RBP6.53□□□□□ -1.36
VPS8-220ENST00000469713 BPNT1O95861 308 aa6.52□□□□□ -1.37
VPS8-220ENST00000469713 ATF4P18848 351 aaPredicted RBP6.52□□□□□ -1.37
VPS8-220ENST00000469713 RPL6Q02878 288 aaKnown RBP6.52□□□□□ -1.37
VPS8-220ENST00000469713 MPP2Q14168 576 aa6.52□□□□□ -1.37
VPS8-220ENST00000469713 INPP5AQ14642 412 aa6.52□□□□□ -1.37
VPS8-220ENST00000469713 KIF4BQ2VIQ3 1234 aa6.52□□□□□ -1.37
VPS8-220ENST00000469713 LRFN4Q6PJG9 635 aa6.52□□□□□ -1.37
VPS8-220ENST00000469713 IGF2-ASQ6U949 168 aa6.52□□□□□ -1.37
VPS8-220ENST00000469713 VPS37DQ86XT2 251 aa6.52□□□□□ -1.37
VPS8-220ENST00000469713 GMLQ99445 158 aa6.52□□□□□ -1.37
VPS8-220ENST00000469713 WDR18Q9BV38 432 aa6.52□□□□□ -1.37
VPS8-220ENST00000469713 TANGO6Q9C0B7 1094 aa6.52□□□□□ -1.37
VPS8-220ENST00000469713 PRKAG2Q9UGJ0 569 aa6.52□□□□□ -1.37
VPS8-220ENST00000469713 EFR3BQ9Y2G0 817 aa6.52□□□□□ -1.37
VPS8-220ENST00000469713 ROBO2Q9HCK4 1378 aa6.52□□□□□ -1.37
VPS8-220ENST00000469713 AOC2O75106 756 aa6.51□□□□□ -1.37
VPS8-220ENST00000469713 COL8A1P27658 744 aa6.51□□□□□ -1.37
VPS8-220ENST00000469713 NASPP49321 788 aaPredicted RBP6.51□□□□□ -1.37
VPS8-220ENST00000469713 SF3A1Q15459 793 aaKnown RBP6.51□□□□□ -1.37
VPS8-220ENST00000469713 WIPI1Q5MNZ9 446 aaPredicted RBP6.51□□□□□ -1.37
VPS8-220ENST00000469713 EXOSC6Q5RKV6 272 aaKnown RBP6.51□□□□□ -1.37
VPS8-220ENST00000469713 HP1BP3Q5SSJ5 553 aaPredicted RBP6.51□□□□□ -1.37
VPS8-220ENST00000469713 ZC3HAV1Q7Z2W4 902 aaKnown RBP6.51□□□□□ -1.37
VPS8-220ENST00000469713 REC114Q7Z4M0 266 aa6.51□□□□□ -1.37
Retrieved 100 of 20,778 RNA–protein pairs in 20.6 ms