RNA–Protein interactions for RNA: ENST00000469655.5

KCNC4-206, Transcript of potassium voltage-gated channel subfamily C member 4, humanhuman

TSL 1 (best)

Gene KCNC4, Length 3,487 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KCNC4-206ENST00000469655 SGSM3Q96HU1 749 aa17.51■□□□□ 0.39
KCNC4-206ENST00000469655 MARCKSP29966 332 aaPredicted RBP17.5■□□□□ 0.39
KCNC4-206ENST00000469655 UBXN6Q9BZV1 441 aa17.5■□□□□ 0.39
KCNC4-206ENST00000469655 DBNLQ9UJU6 430 aaKnown RBP17.5■□□□□ 0.39
KCNC4-206ENST00000469655 GPTP24298 496 aa17.5■□□□□ 0.39
KCNC4-206ENST00000469655 RDXP35241 583 aaKnown RBP17.5■□□□□ 0.39
KCNC4-206ENST00000469655 SARM1Q6SZW1 724 aa17.5■□□□□ 0.39
KCNC4-206ENST00000469655 CCDC150Q8NCX0 1101 aa17.5■□□□□ 0.39
KCNC4-206ENST00000469655 DHX58Q96C10 678 aa17.5■□□□□ 0.39
KCNC4-206ENST00000469655 SERPINC1P01008 464 aa17.49■□□□□ 0.39
KCNC4-206ENST00000469655 CFAP100Q494V2 611 aa17.49■□□□□ 0.39
KCNC4-206ENST00000469655 TTLL7Q6ZT98 887 aa17.49■□□□□ 0.39
KCNC4-206ENST00000469655 IRX2Q9BZI1 471 aaPredicted RBP17.49■□□□□ 0.39
KCNC4-206ENST00000469655 PSD3Q9NYI0 1048 aa17.49■□□□□ 0.39
KCNC4-206ENST00000469655 MKRN1Q9UHC7 482 aaKnown RBP17.49■□□□□ 0.39
KCNC4-206ENST00000469655 C1orf167Q5SNV9 1468 aa17.49■□□□□ 0.39
KCNC4-206ENST00000469655 A0A087WUV0 522 aaPredicted RBP17.49■□□□□ 0.39
KCNC4-206ENST00000469655 PSDA5PKW4 1024 aaPredicted RBP17.49■□□□□ 0.39
KCNC4-206ENST00000469655 SLC4A8Q2Y0W8 1093 aa17.49■□□□□ 0.39
KCNC4-206ENST00000469655 SPECC1Q5M775 1068 aa17.49■□□□□ 0.39
KCNC4-206ENST00000469655 NAT10Q9H0A0 1025 aaKnown RBP17.49■□□□□ 0.39
KCNC4-206ENST00000469655 MED4Q9NPJ6 270 aa17.49■□□□□ 0.39
KCNC4-206ENST00000469655 HDXQ7Z353 690 aa17.49■□□□□ 0.39
KCNC4-206ENST00000469655 SUGP1Q8IWZ8 645 aaKnown RBP17.49■□□□□ 0.39
KCNC4-206ENST00000469655 KIRREL3Q8IZU9 778 aa17.49■□□□□ 0.39
KCNC4-206ENST00000469655 DESI2Q9BSY9 194 aa17.49■□□□□ 0.39
KCNC4-206ENST00000469655 KIF1CO43896 1103 aaKnown RBP17.48■□□□□ 0.39
KCNC4-206ENST00000469655 CEP89Q96ST8 783 aa17.48■□□□□ 0.39
KCNC4-206ENST00000469655 WDHD1O75717 1129 aaPredicted RBP17.48■□□□□ 0.39
KCNC4-206ENST00000469655 TFRCP02786 760 aaKnown RBP17.48■□□□□ 0.39
KCNC4-206ENST00000469655 PDCP20941 246 aa17.48■□□□□ 0.39
KCNC4-206ENST00000469655 NECTIN1Q15223 517 aa17.48■□□□□ 0.39
KCNC4-206ENST00000469655 NAIF1Q69YI7 327 aaPredicted RBP17.48■□□□□ 0.39
KCNC4-206ENST00000469655 NEK1Q96PY6 1258 aa17.48■□□□□ 0.39
KCNC4-206ENST00000469655 ABCB6Q9NP58 842 aa17.48■□□□□ 0.39
KCNC4-206ENST00000469655 GSCP56915 257 aaPredicted RBP17.48■□□□□ 0.39
KCNC4-206ENST00000469655 RRP12Q5JTH9 1297 aaKnown RBP17.48■□□□□ 0.39
KCNC4-206ENST00000469655 DCAF5Q96JK2 942 aa17.48■□□□□ 0.39
KCNC4-206ENST00000469655 CALR3Q96L12 384 aaKnown RBP17.48■□□□□ 0.39
KCNC4-206ENST00000469655 MTMR7Q9Y216 660 aa17.48■□□□□ 0.39
KCNC4-206ENST00000469655 IQUBQ8NA54 791 aa17.47■□□□□ 0.39
KCNC4-206ENST00000469655 LZTFL1Q9NQ48 299 aa17.47■□□□□ 0.39
KCNC4-206ENST00000469655 KDM6AO15550 1401 aaPredicted RBP17.47■□□□□ 0.39
KCNC4-206ENST00000469655 IRF6O14896 467 aa17.47■□□□□ 0.39
KCNC4-206ENST00000469655 PTPN12Q05209 780 aaKnown RBP17.47■□□□□ 0.39
KCNC4-206ENST00000469655 CPLX2Q6PUV4 134 aaKnown RBP17.47■□□□□ 0.39
KCNC4-206ENST00000469655 CLIC6Q96NY7 704 aa17.47■□□□□ 0.39
KCNC4-206ENST00000469655 CCDC196A0A1B0GTZ2 297 aa17.46■□□□□ 0.39
KCNC4-206ENST00000469655 PSMA5P28066 241 aa17.46■□□□□ 0.39
KCNC4-206ENST00000469655 TNNI3KQ59H18 835 aa17.46■□□□□ 0.39
KCNC4-206ENST00000469655 TRIM65Q6PJ69 517 aa17.46■□□□□ 0.39
KCNC4-206ENST00000469655 FSIP1Q8NA03 581 aa17.46■□□□□ 0.39
KCNC4-206ENST00000469655 MYL10Q9BUA6 226 aa17.46■□□□□ 0.39
KCNC4-206ENST00000469655 ZSWIM6Q9HCJ5 1215 aa17.46■□□□□ 0.39
KCNC4-206ENST00000469655 FPGT-TNNI3KV9GXZ4 949 aa17.46■□□□□ 0.39
KCNC4-206ENST00000469655 PHLPP2Q6ZVD8 1323 aa17.46■□□□□ 0.39
KCNC4-206ENST00000469655 SNAP23O00161 211 aa17.46■□□□□ 0.39
KCNC4-206ENST00000469655 ATP1A3P13637 1013 aa17.46■□□□□ 0.39
KCNC4-206ENST00000469655 USP8P40818 1118 aa17.46■□□□□ 0.39
KCNC4-206ENST00000469655 DPCR1Q3MIW9 517 aa17.46■□□□□ 0.39
KCNC4-206ENST00000469655 RIN2Q8WYP3 895 aaPredicted RBP17.46■□□□□ 0.39
KCNC4-206ENST00000469655 N4BP2L2Q92802 583 aaPredicted RBP17.46■□□□□ 0.39
KCNC4-206ENST00000469655 HINFPQ9BQA5 517 aa17.46■□□□□ 0.39
KCNC4-206ENST00000469655 SAMM50Q9Y512 469 aa17.46■□□□□ 0.39
KCNC4-206ENST00000469655 MEGF6O75095 1541 aa17.46■□□□□ 0.39
KCNC4-206ENST00000469655 PAX7P23759 505 aa17.46■□□□□ 0.39
KCNC4-206ENST00000469655 TXLNAP40222 546 aa17.46■□□□□ 0.39
KCNC4-206ENST00000469655 CHMP4BP1P59074 171 aa17.46■□□□□ 0.39
KCNC4-206ENST00000469655 PPARDQ03181 441 aa17.46■□□□□ 0.39
KCNC4-206ENST00000469655 SWT1Q5T5J6 900 aaKnown RBP17.46■□□□□ 0.39
KCNC4-206ENST00000469655 SYNE4Q8N205 404 aa17.46■□□□□ 0.39
KCNC4-206ENST00000469655 HELBQ8NG08 1087 aaPredicted RBP17.46■□□□□ 0.39
KCNC4-206ENST00000469655 IQSEC3Q9UPP2 1182 aaPredicted RBP17.46■□□□□ 0.39
KCNC4-206ENST00000469655 ZBTB12Q9Y330 459 aaPredicted RBP17.46■□□□□ 0.39
KCNC4-206ENST00000469655 CAPN7Q9Y6W3 813 aa17.46■□□□□ 0.39
KCNC4-206ENST00000469655 MAP4K1Q92918 833 aa17.45■□□□□ 0.38
KCNC4-206ENST00000469655 CPLX1O14810 134 aa17.45■□□□□ 0.38
KCNC4-206ENST00000469655 CEP57Q86XR8 500 aa17.45■□□□□ 0.38
KCNC4-206ENST00000469655 PUS3Q9BZE2 481 aaKnown RBP17.45■□□□□ 0.38
KCNC4-206ENST00000469655 CD248Q9HCU0 757 aa17.45■□□□□ 0.38
KCNC4-206ENST00000469655 SH2B1Q9NRF2 756 aaPredicted RBP17.45■□□□□ 0.38
KCNC4-206ENST00000469655 PPFIA4O75335 1185 aa17.45■□□□□ 0.38
KCNC4-206ENST00000469655 CAVIN2O95810 425 aa17.45■□□□□ 0.38
KCNC4-206ENST00000469655 CYP21A2P08686 494 aa17.45■□□□□ 0.38
KCNC4-206ENST00000469655 SARNPP82979 210 aaKnown RBP17.45■□□□□ 0.38
KCNC4-206ENST00000469655 SMARCC1Q92922 1105 aaPredicted RBP17.45■□□□□ 0.38
KCNC4-206ENST00000469655 ZSCAN31Q96LW9 406 aaPredicted RBP17.45■□□□□ 0.38
KCNC4-206ENST00000469655 AIFM3Q96NN9 605 aa17.45■□□□□ 0.38
KCNC4-206ENST00000469655 DENND2AQ9ULE3 1009 aa17.45■□□□□ 0.38
KCNC4-206ENST00000469655 CHD2O14647 1828 aaKnown RBP17.45■□□□□ 0.38
KCNC4-206ENST00000469655 USP42Q9H9J4 1324 aaKnown RBP17.44■□□□□ 0.38
KCNC4-206ENST00000469655 HEG1Q9ULI3 1381 aa17.44■□□□□ 0.38
KCNC4-206ENST00000469655 ERLIN1O75477 346 aa17.44■□□□□ 0.38
KCNC4-206ENST00000469655 LRRC24Q50LG9 513 aa17.44■□□□□ 0.38
KCNC4-206ENST00000469655 ACBD3Q9H3P7 528 aa17.44■□□□□ 0.38
KCNC4-206ENST00000469655 INCENPQ9NQS7 918 aa17.44■□□□□ 0.38
KCNC4-206ENST00000469655 CCDC151A5D8V7 595 aa17.44■□□□□ 0.38
KCNC4-206ENST00000469655 CCP110O43303 1012 aa17.44■□□□□ 0.38
KCNC4-206ENST00000469655 TOB2Q14106 344 aaPredicted RBP17.44■□□□□ 0.38
KCNC4-206ENST00000469655 RABGGTAQ92696 567 aa17.44■□□□□ 0.38
Retrieved 100 of 20,778 RNA–protein pairs in 27 ms