RNA–Protein interactions for RNA: ENST00000469054.1

VPS13D-204, Transcript of vacuolar protein sorting 13 homolog D, humanhuman

TSL 3

Gene VPS13D, Length 567 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13D-204ENST00000469054 MROH7-TTC4A0A0A0MT08 1334 aa14.51□□□□□ -0.09
VPS13D-204ENST00000469054 PASKQ96RG2 1323 aa14.51□□□□□ -0.09
VPS13D-204ENST00000469054 GPR75-ASB3A0A0A6YYF3 556 aa14.51□□□□□ -0.09
VPS13D-204ENST00000469054 ADM5C9JUS6 153 aa14.51□□□□□ -0.09
VPS13D-204ENST00000469054 CCDC136Q96JN2 1154 aa14.51□□□□□ -0.09
VPS13D-204ENST00000469054 VEZTQ9HBM0 779 aa14.51□□□□□ -0.09
VPS13D-204ENST00000469054 SCAF8Q9UPN6 1271 aaKnown RBP14.51□□□□□ -0.09
VPS13D-204ENST00000469054 TRAF5O00463 557 aa14.5□□□□□ -0.09
VPS13D-204ENST00000469054 BTDP43251 543 aa14.5□□□□□ -0.09
VPS13D-204ENST00000469054 CDC42EP5Q6NZY7 148 aa14.5□□□□□ -0.09
VPS13D-204ENST00000469054 TMED8Q6PL24 325 aaPredicted RBP14.5□□□□□ -0.09
VPS13D-204ENST00000469054 CENPQQ7L2Z9 268 aaPredicted RBP14.5□□□□□ -0.09
VPS13D-204ENST00000469054 PLEKHM2Q8IWE5 1019 aa14.5□□□□□ -0.09
VPS13D-204ENST00000469054 MAGEB6Q8N7X4 407 aa14.5□□□□□ -0.09
VPS13D-204ENST00000469054 TMOD2Q9NZR1 351 aa14.5□□□□□ -0.09
VPS13D-204ENST00000469054 CYP7A1P22680 504 aa14.49□□□□□ -0.09
VPS13D-204ENST00000469054 FMR1Q06787 632 aaKnown RBP eCLIP14.49□□□□□ -0.09
VPS13D-204ENST00000469054 TNFAIP1Q13829 316 aa14.49□□□□□ -0.09
VPS13D-204ENST00000469054 SLC9C2Q5TAH2 1124 aa14.49□□□□□ -0.09
VPS13D-204ENST00000469054 DLK2Q6UY11 383 aa14.49□□□□□ -0.09
VPS13D-204ENST00000469054 DDX24Q9GZR7 859 aaKnown RBP eCLIP14.49□□□□□ -0.091e-12■□□□□ 10.9
VPS13D-204ENST00000469054 DEFB129Q9H1M3 183 aa14.49□□□□□ -0.09
VPS13D-204ENST00000469054 USP40Q9NVE5 1235 aa14.49□□□□□ -0.09
VPS13D-204ENST00000469054 AKAP11Q9UKA4 1901 aa14.49□□□□□ -0.09
VPS13D-204ENST00000469054 TCP10L2B9ZVM9 353 aa14.48□□□□□ -0.09
VPS13D-204ENST00000469054 BAG3O95817 575 aa14.48□□□□□ -0.09
VPS13D-204ENST00000469054 PDE6AP16499 860 aa14.48□□□□□ -0.09
VPS13D-204ENST00000469054 PDE4AP27815 886 aa14.48□□□□□ -0.09
VPS13D-204ENST00000469054 APLP1P51693 650 aa14.48□□□□□ -0.09
VPS13D-204ENST00000469054 CACNB3P54284 484 aa14.48□□□□□ -0.09
VPS13D-204ENST00000469054 PPP4CP60510 307 aa14.48□□□□□ -0.09
VPS13D-204ENST00000469054 RASA3Q14644 834 aa14.48□□□□□ -0.09
VPS13D-204ENST00000469054 FKBP1CQ5VVH2 108 aa14.48□□□□□ -0.09
VPS13D-204ENST00000469054 ADGRA1Q86SQ6 560 aa14.48□□□□□ -0.09
VPS13D-204ENST00000469054 KBTBD3Q8NAB2 608 aa14.48□□□□□ -0.09
VPS13D-204ENST00000469054 NOL10Q9BSC4 688 aaKnown RBP14.48□□□□□ -0.09
VPS13D-204ENST00000469054 OSBPL3Q9H4L5 887 aa14.48□□□□□ -0.09
VPS13D-204ENST00000469054 PPP2R3BQ9Y5P8 575 aa14.48□□□□□ -0.09
VPS13D-204ENST00000469054 MYH13Q9UKX3 1938 aa14.47□□□□□ -0.09
VPS13D-204ENST00000469054 MAP4K4O95819 1239 aaPredicted RBP14.47□□□□□ -0.09
VPS13D-204ENST00000469054 HSPA6P17066 643 aa14.47□□□□□ -0.09
VPS13D-204ENST00000469054 TNNI2P48788 182 aa14.47□□□□□ -0.09
VPS13D-204ENST00000469054 RHBDL3P58872 404 aa14.47□□□□□ -0.09
VPS13D-204ENST00000469054 PRAMEF18Q5VWM3 479 aa14.47□□□□□ -0.09
VPS13D-204ENST00000469054 CDCA5Q96FF9 252 aa14.47□□□□□ -0.09
VPS13D-204ENST00000469054 PPP4R2Q9NY27 417 aa14.47□□□□□ -0.09
VPS13D-204ENST00000469054 AATFQ9NY61 560 aaKnown RBP eCLIP14.47□□□□□ -0.09
VPS13D-204ENST00000469054 ZNF532Q9HCE3 1301 aa14.46□□□□□ -0.09
VPS13D-204ENST00000469054 TCRBV5S4A2TA0A5A2 114 aa14.46□□□□□ -0.09
VPS13D-204ENST00000469054 CELF2O95319 508 aaKnown RBP14.46□□□□□ -0.09
VPS13D-204ENST00000469054 PLCG2P16885 1265 aa14.46□□□□□ -0.09
VPS13D-204ENST00000469054 ADD2P35612 726 aa14.46□□□□□ -0.09
VPS13D-204ENST00000469054 NFIAQ12857 509 aa14.46□□□□□ -0.09
VPS13D-204ENST00000469054 UBE3CQ15386 1083 aa14.46□□□□□ -0.09
VPS13D-204ENST00000469054 CST9Q5W186 159 aa14.46□□□□□ -0.09
VPS13D-204ENST00000469054 ZSCAN25Q6NSZ9 544 aa14.46□□□□□ -0.09
VPS13D-204ENST00000469054 FAM83AQ86UY5 434 aa14.46□□□□□ -0.09
VPS13D-204ENST00000469054 MIGA1Q8NAN2 632 aa14.46□□□□□ -0.09
VPS13D-204ENST00000469054 IDI2Q9BXS1 227 aa14.46□□□□□ -0.09
VPS13D-204ENST00000469054 ZNF408Q9H9D4 720 aa14.46□□□□□ -0.09
VPS13D-204ENST00000469054 TMEM88BA6NKF7 163 aa14.45□□□□□ -0.1
VPS13D-204ENST00000469054 WDHD1O75717 1129 aaPredicted RBP14.45□□□□□ -0.1
VPS13D-204ENST00000469054 EVI5LQ96CN4 794 aa14.45□□□□□ -0.1
VPS13D-204ENST00000469054 FAM198AQ9UFP1 575 aa14.45□□□□□ -0.1
VPS13D-204ENST00000469054 ENTPD3O75355 529 aa14.44□□□□□ -0.1
VPS13D-204ENST00000469054 CHGBP05060 677 aa14.44□□□□□ -0.1
VPS13D-204ENST00000469054 RGS3P49796 1198 aa14.44□□□□□ -0.1
VPS13D-204ENST00000469054 DYNLL1P63167 89 aaKnown RBP14.44□□□□□ -0.1
VPS13D-204ENST00000469054 TCP10Q12799 353 aa14.44□□□□□ -0.1
VPS13D-204ENST00000469054 LRRFIP1Q32MZ4 808 aaKnown RBP14.44□□□□□ -0.1
VPS13D-204ENST00000469054 SUPT20HL1Q3ZLR7 823 aa14.44□□□□□ -0.1
VPS13D-204ENST00000469054 SLFNL1Q499Z3 407 aa14.44□□□□□ -0.1
VPS13D-204ENST00000469054 CERS3Q8IU89 383 aa14.44□□□□□ -0.1
VPS13D-204ENST00000469054 TEX11Q8IYF3 940 aa14.44□□□□□ -0.1
VPS13D-204ENST00000469054 SH3RF3Q8TEJ3 882 aaPredicted RBP14.44□□□□□ -0.1
VPS13D-204ENST00000469054 FAM151AQ8WW52 585 aa14.44□□□□□ -0.1
VPS13D-204ENST00000469054 RIOK1Q9BRS2 568 aaKnown RBP14.44□□□□□ -0.1
VPS13D-204ENST00000469054 FSD1Q9BTV5 496 aa14.44□□□□□ -0.1
VPS13D-204ENST00000469054 TMEM39BQ9GZU3 492 aa14.44□□□□□ -0.1
VPS13D-204ENST00000469054 CREBZFQ9NS37 354 aa14.44□□□□□ -0.1
VPS13D-204ENST00000469054 CNTNAP1P78357 1384 aa14.44□□□□□ -0.1
VPS13D-204ENST00000469054 MAGEB6P1A0A0J9YX57 407 aa14.43□□□□□ -0.1
VPS13D-204ENST00000469054 TRIM6-TRIM34B2RNG4 842 aa14.43□□□□□ -0.1
VPS13D-204ENST00000469054 RNF113AO15541 343 aaKnown RBP14.43□□□□□ -0.1
VPS13D-204ENST00000469054 ZFYP08048 801 aaPredicted RBP14.43□□□□□ -0.1
VPS13D-204ENST00000469054 NF2P35240 595 aa14.43□□□□□ -0.1
VPS13D-204ENST00000469054 PICALMQ13492 652 aa14.43□□□□□ -0.1
VPS13D-204ENST00000469054 NBPF12Q5TAG4 269 aaPredicted RBP14.43□□□□□ -0.1
VPS13D-204ENST00000469054 C2orf69Q8N8R5 385 aa14.43□□□□□ -0.1
VPS13D-204ENST00000469054 TEPSINQ96N21 525 aa14.43□□□□□ -0.1
VPS13D-204ENST00000469054 GBA2Q9HCG7 927 aaPredicted RBP14.43□□□□□ -0.1
VPS13D-204ENST00000469054 DDX4Q9NQI0 724 aaKnown RBP14.43□□□□□ -0.1
VPS13D-204ENST00000469054 CDAN1Q8IWY9 1227 aa14.42□□□□□ -0.1
VPS13D-204ENST00000469054 ZFPM1Q8IX07 1006 aa14.42□□□□□ -0.1
VPS13D-204ENST00000469054 RFX7Q2KHR2 1363 aa14.42□□□□□ -0.1
VPS13D-204ENST00000469054 FKBP1BP68106 108 aa14.41□□□□□ -0.1
VPS13D-204ENST00000469054 HTRA3P83110 453 aa14.41□□□□□ -0.1
VPS13D-204ENST00000469054 TTC22Q5TAA0 569 aa14.41□□□□□ -0.1
VPS13D-204ENST00000469054 TICAM2Q86XR7 235 aa14.41□□□□□ -0.1
VPS13D-204ENST00000469054 TGFBRAP1Q8WUH2 860 aa14.41□□□□□ -0.1
Retrieved 100 of 20,778 RNA–protein pairs in 70.5 ms