RNA–Protein interactions for RNA: ENST00000468723.1

GPNMB-207, Transcript of glycoprotein nmb, humanhuman

TSL 2

Gene GPNMB, Length 808 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GPNMB-207ENST00000468723 ACTL7BQ9Y614 415 aa6.94□□□□□ -1.3
GPNMB-207ENST00000468723 ZBTB7CA1YPR0 619 aa6.93□□□□□ -1.3
GPNMB-207ENST00000468723 ENC1O14682 589 aa6.93□□□□□ -1.3
GPNMB-207ENST00000468723 ZNF862O60290 1169 aa6.93□□□□□ -1.3
GPNMB-207ENST00000468723 PAGE1O75459 146 aa6.93□□□□□ -1.3
GPNMB-207ENST00000468723 IGLV1-40P01703 118 aa6.93□□□□□ -1.3
GPNMB-207ENST00000468723 RAB6AP20340 208 aa6.93□□□□□ -1.3
GPNMB-207ENST00000468723 EIF4BP23588 611 aaKnown RBP6.93□□□□□ -1.3
GPNMB-207ENST00000468723 ARNTP27540 789 aa6.93□□□□□ -1.3
GPNMB-207ENST00000468723 NFKBIBQ15653 356 aa6.93□□□□□ -1.3
GPNMB-207ENST00000468723 MAP1SQ66K74 1059 aaPredicted RBP6.93□□□□□ -1.3
GPNMB-207ENST00000468723 PDZD3Q86UT5 571 aa6.93□□□□□ -1.3
GPNMB-207ENST00000468723 FAM161BQ96MY7 647 aa6.93□□□□□ -1.3
GPNMB-207ENST00000468723 PPP1R9AQ9ULJ8 1098 aa6.93□□□□□ -1.3
GPNMB-207ENST00000468723 HIF3AQ9Y2N7 669 aa6.93□□□□□ -1.3
GPNMB-207ENST00000468723 SCO2A0A1W2PP80 73 aa6.92□□□□□ -1.3
GPNMB-207ENST00000468723 NME2P22392 152 aa6.92□□□□□ -1.3
GPNMB-207ENST00000468723 ASPAP45381 313 aa6.92□□□□□ -1.3
GPNMB-207ENST00000468723 NFIAQ12857 509 aa6.92□□□□□ -1.3
GPNMB-207ENST00000468723 RNF43Q68DV7 783 aa6.92□□□□□ -1.3
GPNMB-207ENST00000468723 MPRIPQ6WCQ1 1025 aa6.92□□□□□ -1.3
GPNMB-207ENST00000468723 GRIN3AQ8TCU5 1115 aa6.92□□□□□ -1.3
GPNMB-207ENST00000468723 FRMD6Q96NE9 622 aa6.92□□□□□ -1.3
GPNMB-207ENST00000468723 CEP44Q9C0F1 390 aa6.92□□□□□ -1.3
GPNMB-207ENST00000468723 LGR6Q9HBX8 967 aa6.92□□□□□ -1.3
GPNMB-207ENST00000468723 FAM105AQ9NUU6 356 aa6.92□□□□□ -1.3
GPNMB-207ENST00000468723 PPM1HQ9ULR3 514 aa6.92□□□□□ -1.3
GPNMB-207ENST00000468723 TTF2Q9UNY4 1162 aaKnown RBP6.92□□□□□ -1.3
GPNMB-207ENST00000468723 AK5Q9Y6K8 562 aa6.92□□□□□ -1.3
GPNMB-207ENST00000468723 FAM95CA0A1B0GW59 222 aa6.91□□□□□ -1.3
GPNMB-207ENST00000468723 CELA3AP09093 270 aa6.91□□□□□ -1.3
GPNMB-207ENST00000468723 BMP6P22004 513 aa6.91□□□□□ -1.3
GPNMB-207ENST00000468723 XPCQ01831 940 aaPredicted RBP6.91□□□□□ -1.3
GPNMB-207ENST00000468723 PSMD2Q13200 908 aa6.91□□□□□ -1.3
GPNMB-207ENST00000468723 FBXL6Q8N531 539 aa6.91□□□□□ -1.3
GPNMB-207ENST00000468723 MFSD14AQ96MC6 490 aa6.91□□□□□ -1.3
GPNMB-207ENST00000468723 EMILIN2Q9BXX0 1053 aa6.91□□□□□ -1.3
GPNMB-207ENST00000468723 TMPRSS2O15393 492 aa6.9□□□□□ -1.3
GPNMB-207ENST00000468723 GSC2O15499 205 aa6.9□□□□□ -1.3
GPNMB-207ENST00000468723 NFICP08651 508 aa6.9□□□□□ -1.3
GPNMB-207ENST00000468723 SLFN14P0C7P3 912 aa6.9□□□□□ -1.3
GPNMB-207ENST00000468723 FGD1P98174 961 aa6.9□□□□□ -1.3
GPNMB-207ENST00000468723 RASIP1Q5U651 963 aa6.9□□□□□ -1.3
GPNMB-207ENST00000468723 PAOXQ6QHF9 649 aa6.9□□□□□ -1.3
GPNMB-207ENST00000468723 FBXO33Q7Z6M2 555 aa6.9□□□□□ -1.3
GPNMB-207ENST00000468723 GPBAR1Q8TDU6 330 aa6.9□□□□□ -1.3
GPNMB-207ENST00000468723 KRT82Q9NSB4 513 aa6.9□□□□□ -1.3
GPNMB-207ENST00000468723 WDR64B1ANS9 1081 aa6.89□□□□□ -1.31
GPNMB-207ENST00000468723 TGFB1P01137 390 aa6.89□□□□□ -1.31
GPNMB-207ENST00000468723 ID3Q02535 119 aa6.89□□□□□ -1.31
GPNMB-207ENST00000468723 SHISA5Q8N114 240 aa6.89□□□□□ -1.31
GPNMB-207ENST00000468723 Q8N3U1 123 aa6.89□□□□□ -1.31
GPNMB-207ENST00000468723 SHKBP1Q8TBC3 707 aa6.89□□□□□ -1.31
GPNMB-207ENST00000468723 ACSBG1Q96GR2 724 aa6.89□□□□□ -1.31
GPNMB-207ENST00000468723 DBNDD2Q9BQY9 259 aa6.89□□□□□ -1.31
GPNMB-207ENST00000468723 YIPF2Q9BWQ6 316 aa6.89□□□□□ -1.31
GPNMB-207ENST00000468723 CRIM1Q9NZV1 1036 aa6.89□□□□□ -1.31
GPNMB-207ENST00000468723 CSADQ9Y600 493 aa6.89□□□□□ -1.31
GPNMB-207ENST00000468723 SSTR4P31391 388 aa6.88□□□□□ -1.31
GPNMB-207ENST00000468723 DAB2P98082 770 aa6.88□□□□□ -1.31
GPNMB-207ENST00000468723 ZNF252P-AS1Q0IIN9 211 aa6.88□□□□□ -1.31
GPNMB-207ENST00000468723 KIF4BQ2VIQ3 1234 aa6.88□□□□□ -1.31
GPNMB-207ENST00000468723 TMCO4Q5TGY1 634 aa6.88□□□□□ -1.31
GPNMB-207ENST00000468723 MEI1Q5TIA1 1274 aa6.88□□□□□ -1.31
GPNMB-207ENST00000468723 PCNX4Q63HM2 1172 aa6.88□□□□□ -1.31
GPNMB-207ENST00000468723 FANCD2OSQ96PS1 177 aa6.88□□□□□ -1.31
GPNMB-207ENST00000468723 RNF112Q9ULX5 631 aa6.88□□□□□ -1.31
GPNMB-207ENST00000468723 DAGLAQ9Y4D2 1042 aa6.88□□□□□ -1.31
GPNMB-207ENST00000468723 SAMM50Q9Y512 469 aa6.88□□□□□ -1.31
GPNMB-207ENST00000468723 KIR2DP1A0A0G2JNF4 349 aaPredicted RBP6.87□□□□□ -1.31
GPNMB-207ENST00000468723 RNGTTO60942 597 aaKnown RBP6.87□□□□□ -1.31
GPNMB-207ENST00000468723 CCDC85BQ15834 202 aaPredicted RBP6.87□□□□□ -1.31
GPNMB-207ENST00000468723 MAP3K11Q16584 847 aa6.87□□□□□ -1.31
GPNMB-207ENST00000468723 LLGL2Q6P1M3 1020 aa6.87□□□□□ -1.31
GPNMB-207ENST00000468723 SLC51AQ86UW1 340 aa6.87□□□□□ -1.31
GPNMB-207ENST00000468723 ZDHHC13Q8IUH4 622 aa6.87□□□□□ -1.31
GPNMB-207ENST00000468723 EZH1Q92800 747 aaPredicted RBP6.87□□□□□ -1.31
GPNMB-207ENST00000468723 TBC1D32Q96NH3 1257 aa6.87□□□□□ -1.31
GPNMB-207ENST00000468723 SEMA6CQ9H3T2 930 aa6.87□□□□□ -1.31
GPNMB-207ENST00000468723 ACSS3Q9H6R3 686 aa6.87□□□□□ -1.31
GPNMB-207ENST00000468723 PIDD1Q9HB75 910 aa6.87□□□□□ -1.31
GPNMB-207ENST00000468723 DISC1Q9NRI5 854 aa6.87□□□□□ -1.31
GPNMB-207ENST00000468723 PCDHGC5Q9Y5F6 944 aa6.87□□□□□ -1.31
GPNMB-207ENST00000468723 SYNGAP1Q96PV0 1343 aa6.86□□□□□ -1.31
GPNMB-207ENST00000468723 DYNC1LI2O43237 492 aaPredicted RBP6.86□□□□□ -1.31
GPNMB-207ENST00000468723 F13BP05160 661 aa6.86□□□□□ -1.31
GPNMB-207ENST00000468723 HCLS1P14317 486 aaPredicted RBP6.86□□□□□ -1.31
GPNMB-207ENST00000468723 ERCC3P19447 782 aa6.86□□□□□ -1.31
GPNMB-207ENST00000468723 ADMP35318 185 aa6.86□□□□□ -1.31
GPNMB-207ENST00000468723 RANGAP1P46060 587 aaPredicted RBP6.86□□□□□ -1.31
GPNMB-207ENST00000468723 HNRNPUQ00839 825 aaKnown RBP eCLIP6.86□□□□□ -1.31
GPNMB-207ENST00000468723 MAP7Q14244 749 aa6.86□□□□□ -1.31
GPNMB-207ENST00000468723 TTLL4Q14679 1199 aa6.86□□□□□ -1.31
GPNMB-207ENST00000468723 LRRC14Q15048 493 aa6.86□□□□□ -1.31
GPNMB-207ENST00000468723 SV2BQ7L1I2 683 aa6.86□□□□□ -1.31
GPNMB-207ENST00000468723 ATXN3LQ9H3M9 355 aa6.86□□□□□ -1.31
GPNMB-207ENST00000468723 GSX1Q9H4S2 264 aaPredicted RBP6.86□□□□□ -1.31
GPNMB-207ENST00000468723 PRKAG2Q9UGJ0 569 aa6.86□□□□□ -1.31
GPNMB-207ENST00000468723 DCDC2CA8MYV0 355 aa6.85□□□□□ -1.31
GPNMB-207ENST00000468723 CTSHP09668 335 aa6.85□□□□□ -1.31
Retrieved 100 of 20,778 RNA–protein pairs in 103.1 ms