RNA–Protein interactions for RNA: ENST00000466601.5

DNMT3A-208, Transcript of DNA methyltransferase 3 alpha, humanhuman

TSL 2

Gene DNMT3A, Length 812 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DNMT3A-208ENST00000466601 USP40Q9NVE5 1235 aa17.53■□□□□ 0.4
DNMT3A-208ENST00000466601 SCAF8Q9UPN6 1271 aaKnown RBP17.53■□□□□ 0.4
DNMT3A-208ENST00000466601 ADM5C9JUS6 153 aa17.52■□□□□ 0.4
DNMT3A-208ENST00000466601 C1QTNF8P60827 252 aa17.52■□□□□ 0.4
DNMT3A-208ENST00000466601 SLC9C2Q5TAH2 1124 aa17.52■□□□□ 0.4
DNMT3A-208ENST00000466601 CDC42EP5Q6NZY7 148 aa17.52■□□□□ 0.4
DNMT3A-208ENST00000466601 DDX24Q9GZR7 859 aaKnown RBP eCLIP17.52■□□□□ 0.4
DNMT3A-208ENST00000466601 TMOD2Q9NZR1 351 aa17.52■□□□□ 0.4
DNMT3A-208ENST00000466601 TRAF5O00463 557 aa17.51■□□□□ 0.39
DNMT3A-208ENST00000466601 PDE6AP16499 860 aa17.51■□□□□ 0.39
DNMT3A-208ENST00000466601 ADGRA1Q86SQ6 560 aa17.51■□□□□ 0.39
DNMT3A-208ENST00000466601 KBTBD3Q8NAB2 608 aa17.51■□□□□ 0.39
DNMT3A-208ENST00000466601 NOL10Q9BSC4 688 aaKnown RBP17.51■□□□□ 0.39
DNMT3A-208ENST00000466601 POLR2AP24928 1970 aaKnown RBP17.51■□□□□ 0.39
DNMT3A-208ENST00000466601 DOCK2Q92608 1830 aa17.51■□□□□ 0.39
DNMT3A-208ENST00000466601 ECM29Q5VYK3 1845 aa17.5■□□□□ 0.39
DNMT3A-208ENST00000466601 TCP10L2B9ZVM9 353 aa17.5■□□□□ 0.39
DNMT3A-208ENST00000466601 BAG3O95817 575 aa17.5■□□□□ 0.39
DNMT3A-208ENST00000466601 ADD2P35612 726 aa17.5■□□□□ 0.39
DNMT3A-208ENST00000466601 CACNB3P54284 484 aa17.5■□□□□ 0.39
DNMT3A-208ENST00000466601 FMR1Q06787 632 aaKnown RBP eCLIP17.5■□□□□ 0.39
DNMT3A-208ENST00000466601 ZSCAN25Q6NSZ9 544 aa17.5■□□□□ 0.39
DNMT3A-208ENST00000466601 DLK2Q6UY11 383 aa17.5■□□□□ 0.39
DNMT3A-208ENST00000466601 MAST2Q6P0Q8 1798 aa17.5■□□□□ 0.39
DNMT3A-208ENST00000466601 PASKQ96RG2 1323 aa17.49■□□□□ 0.39
DNMT3A-208ENST00000466601 ZNF532Q9HCE3 1301 aa17.49■□□□□ 0.39
DNMT3A-208ENST00000466601 TCRBV5S4A2TA0A5A2 114 aa17.49■□□□□ 0.39
DNMT3A-208ENST00000466601 TNNI2P48788 182 aa17.49■□□□□ 0.39
DNMT3A-208ENST00000466601 RHBDL3P58872 404 aa17.49■□□□□ 0.39
DNMT3A-208ENST00000466601 PPP4CP60510 307 aa17.49■□□□□ 0.39
DNMT3A-208ENST00000466601 TNFAIP1Q13829 316 aa17.49■□□□□ 0.39
DNMT3A-208ENST00000466601 EVI5LQ96CN4 794 aa17.49■□□□□ 0.39
DNMT3A-208ENST00000466601 DEFB129Q9H1M3 183 aa17.49■□□□□ 0.39
DNMT3A-208ENST00000466601 AATFQ9NY61 560 aaKnown RBP eCLIP17.49■□□□□ 0.39
DNMT3A-208ENST00000466601 RASA3Q14644 834 aa17.48■□□□□ 0.39
DNMT3A-208ENST00000466601 UBE3CQ15386 1083 aa17.48■□□□□ 0.39
DNMT3A-208ENST00000466601 FKBP1CQ5VVH2 108 aa17.48■□□□□ 0.39
DNMT3A-208ENST00000466601 MIGA1Q8NAN2 632 aa17.48■□□□□ 0.39
DNMT3A-208ENST00000466601 CDCA5Q96FF9 252 aa17.48■□□□□ 0.39
DNMT3A-208ENST00000466601 FSD1Q9BTV5 496 aa17.48■□□□□ 0.39
DNMT3A-208ENST00000466601 PPP2R3BQ9Y5P8 575 aa17.48■□□□□ 0.39
DNMT3A-208ENST00000466601 TRIM6-TRIM34B2RNG4 842 aa17.47■□□□□ 0.39
DNMT3A-208ENST00000466601 CHGBP05060 677 aa17.47■□□□□ 0.39
DNMT3A-208ENST00000466601 ZFYP08048 801 aaPredicted RBP17.47■□□□□ 0.39
DNMT3A-208ENST00000466601 PLCG2P16885 1265 aa17.47■□□□□ 0.39
DNMT3A-208ENST00000466601 DYNLL1P63167 89 aaKnown RBP17.47■□□□□ 0.39
DNMT3A-208ENST00000466601 LRRFIP1Q32MZ4 808 aaKnown RBP17.47■□□□□ 0.39
DNMT3A-208ENST00000466601 SLFNL1Q499Z3 407 aa17.47■□□□□ 0.39
DNMT3A-208ENST00000466601 PRAMEF18Q5VWM3 479 aa17.47■□□□□ 0.39
DNMT3A-208ENST00000466601 SH3RF3Q8TEJ3 882 aaPredicted RBP17.47■□□□□ 0.39
DNMT3A-208ENST00000466601 IDI2Q9BXS1 227 aa17.47■□□□□ 0.39
DNMT3A-208ENST00000466601 MAGEB6P1A0A0J9YX57 407 aa17.46■□□□□ 0.39
DNMT3A-208ENST00000466601 RNF113AO15541 343 aaKnown RBP17.46■□□□□ 0.39
DNMT3A-208ENST00000466601 NFIAQ12857 509 aa17.46■□□□□ 0.39
DNMT3A-208ENST00000466601 FAM83AQ86UY5 434 aa17.46■□□□□ 0.39
DNMT3A-208ENST00000466601 CERS3Q8IU89 383 aa17.46■□□□□ 0.39
DNMT3A-208ENST00000466601 TEX11Q8IYF3 940 aa17.46■□□□□ 0.39
DNMT3A-208ENST00000466601 RILPL2Q969X0 211 aa17.46■□□□□ 0.39
DNMT3A-208ENST00000466601 ZNF408Q9H9D4 720 aa17.46■□□□□ 0.39
DNMT3A-208ENST00000466601 FAM198AQ9UFP1 575 aa17.46■□□□□ 0.39
DNMT3A-208ENST00000466601 CNTNAP1P78357 1384 aa17.45■□□□□ 0.38
DNMT3A-208ENST00000466601 WDHD1O75717 1129 aaPredicted RBP17.45■□□□□ 0.38
DNMT3A-208ENST00000466601 CELF2O95319 508 aaKnown RBP17.45■□□□□ 0.38
DNMT3A-208ENST00000466601 RGS3P49796 1198 aa17.45■□□□□ 0.38
DNMT3A-208ENST00000466601 APLP1P51693 650 aa17.45■□□□□ 0.38
DNMT3A-208ENST00000466601 TCP10Q12799 353 aa17.45■□□□□ 0.38
DNMT3A-208ENST00000466601 TTC22Q5TAA0 569 aa17.45■□□□□ 0.38
DNMT3A-208ENST00000466601 SKAP1Q86WV1 359 aa17.45■□□□□ 0.38
DNMT3A-208ENST00000466601 FAM151AQ8WW52 585 aa17.45■□□□□ 0.38
DNMT3A-208ENST00000466601 RIOK1Q9BRS2 568 aaKnown RBP17.45■□□□□ 0.38
DNMT3A-208ENST00000466601 TMEM39BQ9GZU3 492 aa17.45■□□□□ 0.38
DNMT3A-208ENST00000466601 ENTPD3O75355 529 aa17.44■□□□□ 0.38
DNMT3A-208ENST00000466601 PICALMQ13492 652 aa17.44■□□□□ 0.38
DNMT3A-208ENST00000466601 CST9Q5W186 159 aa17.44■□□□□ 0.38
DNMT3A-208ENST00000466601 APPBP2Q92624 585 aa17.44■□□□□ 0.38
DNMT3A-208ENST00000466601 DDX4Q9NQI0 724 aaKnown RBP17.44■□□□□ 0.38
DNMT3A-208ENST00000466601 RFX7Q2KHR2 1363 aa17.43■□□□□ 0.38
DNMT3A-208ENST00000466601 TMEM88BA6NKF7 163 aa17.43■□□□□ 0.38
DNMT3A-208ENST00000466601 NPM3O75607 178 aaKnown RBP17.43■□□□□ 0.38
DNMT3A-208ENST00000466601 GSPT1P15170 499 aaKnown RBP17.43■□□□□ 0.38
DNMT3A-208ENST00000466601 NF2P35240 595 aa17.43■□□□□ 0.38
DNMT3A-208ENST00000466601 SUPT20HL1Q3ZLR7 823 aa17.43■□□□□ 0.38
DNMT3A-208ENST00000466601 NBPF12Q5TAG4 269 aaPredicted RBP17.43■□□□□ 0.38
DNMT3A-208ENST00000466601 TGFBRAP1Q8WUH2 860 aa17.43■□□□□ 0.38
DNMT3A-208ENST00000466601 TEPSINQ96N21 525 aa17.43■□□□□ 0.38
DNMT3A-208ENST00000466601 PUS7LQ9H0K6 701 aaKnown RBP17.43■□□□□ 0.38
DNMT3A-208ENST00000466601 MYH7P12883 1935 aa17.43■□□□□ 0.38
DNMT3A-208ENST00000466601 MBD4O95243 580 aa17.42■□□□□ 0.38
DNMT3A-208ENST00000466601 HSPA6P17066 643 aa17.42■□□□□ 0.38
DNMT3A-208ENST00000466601 TICAM2Q86XR7 235 aa17.42■□□□□ 0.38
DNMT3A-208ENST00000466601 ZFPM1Q8IX07 1006 aa17.42■□□□□ 0.38
DNMT3A-208ENST00000466601 LCORLQ8N3X6 602 aa17.42■□□□□ 0.38
DNMT3A-208ENST00000466601 OSBP2Q969R2 916 aa17.42■□□□□ 0.38
DNMT3A-208ENST00000466601 AIDAQ96BJ3 306 aa17.42■□□□□ 0.38
DNMT3A-208ENST00000466601 ARMT1Q9H993 441 aa17.42■□□□□ 0.38
DNMT3A-208ENST00000466601 USP5P45974 858 aa17.41■□□□□ 0.38
DNMT3A-208ENST00000466601 ZMYM1Q5SVZ6 1142 aa17.41■□□□□ 0.38
DNMT3A-208ENST00000466601 MAPKAPK5Q8IW41 473 aa17.41■□□□□ 0.38
DNMT3A-208ENST00000466601 CDAN1Q8IWY9 1227 aa17.41■□□□□ 0.38
DNMT3A-208ENST00000466601 CRNKL1Q9BZJ0 848 aaKnown RBP17.41■□□□□ 0.38
Retrieved 100 of 20,778 RNA–protein pairs in 66.3 ms