RNA–Protein interactions for RNA: ENST00000466410.5

LIMS2-212, Transcript of LIM zinc finger domain containing 2, humanhuman

TSL 2

Gene LIMS2, Length 2,592 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIMS2-212ENST00000466410 CMA1P23946 247 aa22.46■■□□□ 1.19
LIMS2-212ENST00000466410 SLC39A14Q15043 492 aa22.46■■□□□ 1.19
LIMS2-212ENST00000466410 MICU3Q86XE3 530 aa22.46■■□□□ 1.19
LIMS2-212ENST00000466410 VPS37DQ86XT2 251 aa22.46■■□□□ 1.19
LIMS2-212ENST00000466410 TCRBV5S4A2TA0A5A2 114 aa22.46■■□□□ 1.19
LIMS2-212ENST00000466410 ARID4AP29374 1257 aaPredicted RBP22.45■■□□□ 1.19
LIMS2-212ENST00000466410 PPP4R3BQ5MIZ7 849 aa22.45■■□□□ 1.19
LIMS2-212ENST00000466410 KRT40Q6A162 431 aa22.45■■□□□ 1.19
LIMS2-212ENST00000466410 TBC1D2BQ9UPU7 963 aa22.45■■□□□ 1.19
LIMS2-212ENST00000466410 PDE8AO60658 829 aa22.45■■□□□ 1.18
LIMS2-212ENST00000466410 PDCL2Q8N4E4 241 aa22.45■■□□□ 1.18
LIMS2-212ENST00000466410 IGDCC4Q8TDY8 1250 aa22.45■■□□□ 1.18
LIMS2-212ENST00000466410 STRBPQ96SI9 672 aaKnown RBP22.45■■□□□ 1.18
LIMS2-212ENST00000466410 BPIFA3Q9BQP9 254 aa22.45■■□□□ 1.18
LIMS2-212ENST00000466410 PAXBP1Q9Y5B6 917 aa22.45■■□□□ 1.18
LIMS2-212ENST00000466410 NLRP12P59046 1061 aa22.44■■□□□ 1.18
LIMS2-212ENST00000466410 CEP135Q66GS9 1140 aa22.44■■□□□ 1.18
LIMS2-212ENST00000466410 ZNF592Q92610 1267 aa22.44■■□□□ 1.18
LIMS2-212ENST00000466410 AIDAQ96BJ3 306 aa22.44■■□□□ 1.18
LIMS2-212ENST00000466410 MYL10Q9BUA6 226 aa22.44■■□□□ 1.18
LIMS2-212ENST00000466410 UBN2Q6ZU65 1347 aa22.44■■□□□ 1.18
LIMS2-212ENST00000466410 CDKL5O76039 1030 aa22.44■■□□□ 1.18
LIMS2-212ENST00000466410 LRP6O75581 1613 aa22.43■■□□□ 1.18
LIMS2-212ENST00000466410 SNAP23O00161 211 aa22.43■■□□□ 1.18
LIMS2-212ENST00000466410 NCBP1Q09161 790 aaKnown RBP22.43■■□□□ 1.18
LIMS2-212ENST00000466410 NTRK3Q16288 839 aa22.43■■□□□ 1.18
LIMS2-212ENST00000466410 ISM2Q6H9L7 571 aa22.43■■□□□ 1.18
LIMS2-212ENST00000466410 XPO4Q9C0E2 1151 aaKnown RBP22.43■■□□□ 1.18
LIMS2-212ENST00000466410 BTG4Q9NY30 223 aa22.43■■□□□ 1.18
LIMS2-212ENST00000466410 ANKRD36CQ5JPF3 1778 aa22.43■■□□□ 1.18
LIMS2-212ENST00000466410 NUP98P52948 1817 aa22.43■■□□□ 1.18
LIMS2-212ENST00000466410 UBE2Q2LH0YL09 131 aa22.43■■□□□ 1.18
LIMS2-212ENST00000466410 ZBTB43O43298 467 aa22.43■■□□□ 1.18
LIMS2-212ENST00000466410 UQCRFS1P1P0C7P4 283 aa22.43■■□□□ 1.18
LIMS2-212ENST00000466410 CCDC112Q8NEF3 446 aa22.43■■□□□ 1.18
LIMS2-212ENST00000466410 TMEM87BQ96K49 555 aa22.43■■□□□ 1.18
LIMS2-212ENST00000466410 LY9Q9HBG7 655 aa22.43■■□□□ 1.18
LIMS2-212ENST00000466410 FAM217BQ9NTX9 383 aaPredicted RBP22.43■■□□□ 1.18
LIMS2-212ENST00000466410 TRMT1Q9NXH9 659 aaKnown RBP22.43■■□□□ 1.18
LIMS2-212ENST00000466410 IFNKQ9P0W0 207 aa22.43■■□□□ 1.18
LIMS2-212ENST00000466410 RANBP6O60518 1105 aaKnown RBP22.42■■□□□ 1.18
LIMS2-212ENST00000466410 FGFR2P21802 821 aa22.42■■□□□ 1.18
LIMS2-212ENST00000466410 NCAPHQ15003 741 aa22.42■■□□□ 1.18
LIMS2-212ENST00000466410 PUM3Q15397 648 aaKnown RBP22.42■■□□□ 1.18
LIMS2-212ENST00000466410 CPLX2Q6PUV4 134 aaKnown RBP22.42■■□□□ 1.18
LIMS2-212ENST00000466410 NFXL1Q6ZNB6 911 aa22.42■■□□□ 1.18
LIMS2-212ENST00000466410 LPIN2Q92539 896 aa22.42■■□□□ 1.18
LIMS2-212ENST00000466410 EPB41L4AQ9HCS5 686 aaPredicted RBP22.42■■□□□ 1.18
LIMS2-212ENST00000466410 BCL9O00512 1426 aa22.42■■□□□ 1.18
LIMS2-212ENST00000466410 SMC2O95347 1197 aa22.42■■□□□ 1.18
LIMS2-212ENST00000466410 PTPAQ15257 358 aa22.42■■□□□ 1.18
LIMS2-212ENST00000466410 TMEM67Q5HYA8 995 aa22.42■■□□□ 1.18
LIMS2-212ENST00000466410 NYAP1Q6ZVC0 841 aa22.42■■□□□ 1.18
LIMS2-212ENST00000466410 DZIP3Q86Y13 1208 aaKnown RBP22.42■■□□□ 1.18
LIMS2-212ENST00000466410 RGS22Q8NE09 1264 aa22.42■■□□□ 1.18
LIMS2-212ENST00000466410 OSBPL5Q9H0X9 879 aaPredicted RBP22.42■■□□□ 1.18
LIMS2-212ENST00000466410 SYKP43405 635 aa22.41■■□□□ 1.18
LIMS2-212ENST00000466410 GSDMDP57764 484 aa22.41■■□□□ 1.18
LIMS2-212ENST00000466410 CTDSPL2Q05D32 466 aa22.41■■□□□ 1.18
LIMS2-212ENST00000466410 SHC4Q6S5L8 630 aa22.41■■□□□ 1.18
LIMS2-212ENST00000466410 TACC3Q9Y6A5 838 aa22.41■■□□□ 1.18
LIMS2-212ENST00000466410 GOLGA8AA7E2F4 631 aa22.41■■□□□ 1.18
LIMS2-212ENST00000466410 IARSP41252 1262 aaKnown RBP22.41■■□□□ 1.18
LIMS2-212ENST00000466410 GNL2Q13823 731 aaKnown RBP22.41■■□□□ 1.18
LIMS2-212ENST00000466410 NAA30Q147X3 362 aaPredicted RBP22.41■■□□□ 1.18
LIMS2-212ENST00000466410 PTPN14Q15678 1187 aa22.41■■□□□ 1.18
LIMS2-212ENST00000466410 SPATA5Q8NB90 893 aa22.41■■□□□ 1.18
LIMS2-212ENST00000466410 SYTL4Q96C24 671 aaPredicted RBP22.41■■□□□ 1.18
LIMS2-212ENST00000466410 ALX1Q15699 326 aa22.4■■□□□ 1.18
LIMS2-212ENST00000466410 SGMS1Q86VZ5 419 aa22.4■■□□□ 1.18
LIMS2-212ENST00000466410 IFNL3Q8IZI9 196 aa22.4■■□□□ 1.18
LIMS2-212ENST00000466410 CCAR2Q8N163 923 aaKnown RBP22.4■■□□□ 1.18
LIMS2-212ENST00000466410 MAGEB6Q8N7X4 407 aa22.4■■□□□ 1.18
LIMS2-212ENST00000466410 MAP3K14Q99558 947 aa22.4■■□□□ 1.18
LIMS2-212ENST00000466410 ZSWIM5Q9P217 1185 aa22.4■■□□□ 1.18
LIMS2-212ENST00000466410 HPSEQ9Y251 543 aa22.4■■□□□ 1.18
LIMS2-212ENST00000466410 MBD4O95243 580 aa22.4■■□□□ 1.18
LIMS2-212ENST00000466410 RASGRF1Q13972 1273 aa22.4■■□□□ 1.18
LIMS2-212ENST00000466410 IMPACTQ9P2X3 320 aa22.4■■□□□ 1.18
LIMS2-212ENST00000466410 PATL2C9JE40 543 aaKnown RBP22.39■■□□□ 1.17
LIMS2-212ENST00000466410 PPP6R2O75170 966 aa22.39■■□□□ 1.17
LIMS2-212ENST00000466410 TMC6Q7Z403 805 aa22.39■■□□□ 1.17
LIMS2-212ENST00000466410 TIGD1Q96MW7 591 aa22.39■■□□□ 1.17
LIMS2-212ENST00000466410 CLIC6Q96NY7 704 aa22.39■■□□□ 1.17
LIMS2-212ENST00000466410 ARMT1Q9H993 441 aa22.39■■□□□ 1.17
LIMS2-212ENST00000466410 ECM29Q5VYK3 1845 aa22.39■■□□□ 1.17
LIMS2-212ENST00000466410 U2AF2P26368 475 aaKnown RBP eCLIP22.39■■□□□ 1.17
LIMS2-212ENST00000466410 ZNF34Q8IZ26 560 aa22.39■■□□□ 1.17
LIMS2-212ENST00000466410 NAPBQ9H115 298 aa22.39■■□□□ 1.17
LIMS2-212ENST00000466410 MROH5Q6ZUA9 1318 aa22.38■■□□□ 1.17
LIMS2-212ENST00000466410 ERVV-1B6SEH8 477 aa22.38■■□□□ 1.17
LIMS2-212ENST00000466410 LMOD1P29536 600 aaPredicted RBP22.38■■□□□ 1.17
LIMS2-212ENST00000466410 CBX1P83916 185 aa22.38■■□□□ 1.17
LIMS2-212ENST00000466410 IFIT3O14879 490 aaKnown RBP22.38■■□□□ 1.17
LIMS2-212ENST00000466410 ARMCX5Q6P1M9 558 aa22.38■■□□□ 1.17
LIMS2-212ENST00000466410 JMYQ8N9B5 988 aa22.38■■□□□ 1.17
LIMS2-212ENST00000466410 GNL3Q9BVP2 549 aaKnown RBP eCLIP22.38■■□□□ 1.17
LIMS2-212ENST00000466410 SLC26A6Q9BXS9 759 aa22.38■■□□□ 1.17
LIMS2-212ENST00000466410 TUBE1Q9UJT0 475 aa22.38■■□□□ 1.17
LIMS2-212ENST00000466410 ROBO1Q9Y6N7 1651 aa22.37■■□□□ 1.17
Retrieved 100 of 20,778 RNA–protein pairs in 20 ms