RNA–Protein interactions for RNA: ENST00000465941.1

HOXA9-203, Transcript of homeobox A9, humanhuman

TSL 1 (best)

Gene HOXA9, Length 657 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HOXA9-203ENST00000465941 PLEKHM2Q8IWE5 1019 aa22.32■■□□□ 1.16
HOXA9-203ENST00000465941 USP40Q9NVE5 1235 aa22.32■■□□□ 1.16
HOXA9-203ENST00000465941 TMOD2Q9NZR1 351 aa22.32■■□□□ 1.16
HOXA9-203ENST00000465941 MAP4K4O95819 1239 aaPredicted RBP22.31■■□□□ 1.16
HOXA9-203ENST00000465941 APLP1P51693 650 aa22.31■■□□□ 1.16
HOXA9-203ENST00000465941 FMR1Q06787 632 aaKnown RBP eCLIP22.31■■□□□ 1.16
HOXA9-203ENST00000465941 SLC9C2Q5TAH2 1124 aa22.31■■□□□ 1.16
HOXA9-203ENST00000465941 DLK2Q6UY11 383 aa22.31■■□□□ 1.16
HOXA9-203ENST00000465941 MAGEB6Q8N7X4 407 aa22.31■■□□□ 1.16
HOXA9-203ENST00000465941 CCDC136Q96JN2 1154 aa22.31■■□□□ 1.16
HOXA9-203ENST00000465941 PPP2R3BQ9Y5P8 575 aa22.31■■□□□ 1.16
HOXA9-203ENST00000465941 HSPA6P17066 643 aa22.3■■□□□ 1.16
HOXA9-203ENST00000465941 CYP7A1P22680 504 aa22.3■■□□□ 1.16
HOXA9-203ENST00000465941 PPP4CP60510 307 aa22.3■■□□□ 1.16
HOXA9-203ENST00000465941 RASA3Q14644 834 aa22.3■■□□□ 1.16
HOXA9-203ENST00000465941 CST9Q5W186 159 aa22.3■■□□□ 1.16
HOXA9-203ENST00000465941 ADGRA1Q86SQ6 560 aa22.3■■□□□ 1.16
HOXA9-203ENST00000465941 CDCA5Q96FF9 252 aa22.3■■□□□ 1.16
HOXA9-203ENST00000465941 DDX24Q9GZR7 859 aaKnown RBP eCLIP22.3■■□□□ 1.16
HOXA9-203ENST00000465941 TCP10L2B9ZVM9 353 aa22.29■■□□□ 1.16
HOXA9-203ENST00000465941 BAG3O95817 575 aa22.29■■□□□ 1.16
HOXA9-203ENST00000465941 PDE6AP16499 860 aa22.29■■□□□ 1.16
HOXA9-203ENST00000465941 TNNI2P48788 182 aa22.29■■□□□ 1.16
HOXA9-203ENST00000465941 CACNB3P54284 484 aa22.29■■□□□ 1.16
HOXA9-203ENST00000465941 RHBDL3P58872 404 aa22.29■■□□□ 1.16
HOXA9-203ENST00000465941 FAM83AQ86UY5 434 aa22.29■■□□□ 1.16
HOXA9-203ENST00000465941 KBTBD3Q8NAB2 608 aa22.29■■□□□ 1.16
HOXA9-203ENST00000465941 NOL10Q9BSC4 688 aaKnown RBP22.29■■□□□ 1.16
HOXA9-203ENST00000465941 MYH2Q9UKX2 1941 aa22.29■■□□□ 1.16
HOXA9-203ENST00000465941 ECM29Q5VYK3 1845 aa22.29■■□□□ 1.16
HOXA9-203ENST00000465941 PLCG2P16885 1265 aa22.28■■□□□ 1.16
HOXA9-203ENST00000465941 ZSCAN25Q6NSZ9 544 aa22.28■■□□□ 1.16
HOXA9-203ENST00000465941 IDI2Q9BXS1 227 aa22.28■■□□□ 1.16
HOXA9-203ENST00000465941 DOCK2Q92608 1830 aa22.27■■□□□ 1.16
HOXA9-203ENST00000465941 TCRBV5S4A2TA0A5A2 114 aa22.27■■□□□ 1.16
HOXA9-203ENST00000465941 TMEM88BA6NKF7 163 aa22.27■■□□□ 1.16
HOXA9-203ENST00000465941 CELF2O95319 508 aaKnown RBP22.27■■□□□ 1.16
HOXA9-203ENST00000465941 PDE4AP27815 886 aa22.27■■□□□ 1.16
HOXA9-203ENST00000465941 ADD2P35612 726 aa22.27■■□□□ 1.16
HOXA9-203ENST00000465941 PRAMEF18Q5VWM3 479 aa22.27■■□□□ 1.16
HOXA9-203ENST00000465941 CERS3Q8IU89 383 aa22.27■■□□□ 1.16
HOXA9-203ENST00000465941 MAST2Q6P0Q8 1798 aa22.27■■□□□ 1.16
HOXA9-203ENST00000465941 POLR2AP24928 1970 aaKnown RBP22.27■■□□□ 1.15
HOXA9-203ENST00000465941 CNTNAP1P78357 1384 aa22.26■■□□□ 1.15
HOXA9-203ENST00000465941 WDHD1O75717 1129 aaPredicted RBP22.26■■□□□ 1.15
HOXA9-203ENST00000465941 UBE3CQ15386 1083 aa22.26■■□□□ 1.15
HOXA9-203ENST00000465941 CREBZFQ9NS37 354 aa22.26■■□□□ 1.15
HOXA9-203ENST00000465941 PPP4R2Q9NY27 417 aa22.26■■□□□ 1.15
HOXA9-203ENST00000465941 AATFQ9NY61 560 aaKnown RBP eCLIP22.26■■□□□ 1.15
HOXA9-203ENST00000465941 FAM198AQ9UFP1 575 aa22.26■■□□□ 1.15
HOXA9-203ENST00000465941 ZNF532Q9HCE3 1301 aa22.26■■□□□ 1.15
HOXA9-203ENST00000465941 NPM3O75607 178 aaKnown RBP22.25■■□□□ 1.15
HOXA9-203ENST00000465941 NFIAQ12857 509 aa22.25■■□□□ 1.15
HOXA9-203ENST00000465941 SH3RF3Q8TEJ3 882 aaPredicted RBP22.25■■□□□ 1.15
HOXA9-203ENST00000465941 FAM151AQ8WW52 585 aa22.25■■□□□ 1.15
HOXA9-203ENST00000465941 EVI5LQ96CN4 794 aa22.25■■□□□ 1.15
HOXA9-203ENST00000465941 TEPSINQ96N21 525 aa22.25■■□□□ 1.15
HOXA9-203ENST00000465941 ZNF408Q9H9D4 720 aa22.25■■□□□ 1.15
HOXA9-203ENST00000465941 MYO5AQ9Y4I1 1855 aaKnown RBP22.25■■□□□ 1.15
HOXA9-203ENST00000465941 ENTPD3O75355 529 aa22.24■■□□□ 1.15
HOXA9-203ENST00000465941 ZFYP08048 801 aaPredicted RBP22.24■■□□□ 1.15
HOXA9-203ENST00000465941 LRRFIP1Q32MZ4 808 aaKnown RBP22.24■■□□□ 1.15
HOXA9-203ENST00000465941 SUPT20HL1Q3ZLR7 823 aa22.24■■□□□ 1.15
HOXA9-203ENST00000465941 TMEM39BQ9GZU3 492 aa22.24■■□□□ 1.15
HOXA9-203ENST00000465941 RFX7Q2KHR2 1363 aa22.24■■□□□ 1.15
HOXA9-203ENST00000465941 NF2P35240 595 aa22.23■■□□□ 1.15
HOXA9-203ENST00000465941 NBPF12Q5TAG4 269 aaPredicted RBP22.23■■□□□ 1.15
HOXA9-203ENST00000465941 TICAM2Q86XR7 235 aa22.23■■□□□ 1.15
HOXA9-203ENST00000465941 MIGA1Q8NAN2 632 aa22.23■■□□□ 1.15
HOXA9-203ENST00000465941 MAGEB6P1A0A0J9YX57 407 aa22.22■■□□□ 1.15
HOXA9-203ENST00000465941 RNF113AO15541 343 aaKnown RBP22.22■■□□□ 1.15
HOXA9-203ENST00000465941 RGS3P49796 1198 aa22.22■■□□□ 1.15
HOXA9-203ENST00000465941 DYNLL1P63167 89 aaKnown RBP22.22■■□□□ 1.15
HOXA9-203ENST00000465941 TCP10Q12799 353 aa22.22■■□□□ 1.15
HOXA9-203ENST00000465941 TEX11Q8IYF3 940 aa22.22■■□□□ 1.15
HOXA9-203ENST00000465941 C2orf69Q8N8R5 385 aa22.22■■□□□ 1.15
HOXA9-203ENST00000465941 RIOK1Q9BRS2 568 aaKnown RBP22.22■■□□□ 1.15
HOXA9-203ENST00000465941 DDX4Q9NQI0 724 aaKnown RBP22.22■■□□□ 1.15
HOXA9-203ENST00000465941 CHGBP05060 677 aa22.21■■□□□ 1.15
HOXA9-203ENST00000465941 FKBP1BP68106 108 aa22.21■■□□□ 1.15
HOXA9-203ENST00000465941 SLFNL1Q499Z3 407 aa22.21■■□□□ 1.15
HOXA9-203ENST00000465941 ZFPM1Q8IX07 1006 aa22.21■■□□□ 1.15
HOXA9-203ENST00000465941 FSD1Q9BTV5 496 aa22.21■■□□□ 1.15
HOXA9-203ENST00000465941 GBA2Q9HCG7 927 aaPredicted RBP22.21■■□□□ 1.15
HOXA9-203ENST00000465941 RPAP1Q9BWH6 1393 aaPredicted RBP22.21■■□□□ 1.15
HOXA9-203ENST00000465941 TLL2Q9Y6L7 1015 aa22.2■■□□□ 1.14
HOXA9-203ENST00000465941 PICALMQ13492 652 aa22.19■■□□□ 1.14
HOXA9-203ENST00000465941 SAPCD2Q86UD0 394 aa22.19■■□□□ 1.14
HOXA9-203ENST00000465941 CDAN1Q8IWY9 1227 aa22.19■■□□□ 1.14
HOXA9-203ENST00000465941 TGFBRAP1Q8WUH2 860 aa22.19■■□□□ 1.14
HOXA9-203ENST00000465941 APPBP2Q92624 585 aa22.19■■□□□ 1.14
HOXA9-203ENST00000465941 HOOK2Q96ED9 719 aa22.19■■□□□ 1.14
HOXA9-203ENST00000465941 TRPM7Q96QT4 1865 aa22.19■■□□□ 1.14
HOXA9-203ENST00000465941 TRIM6-TRIM34B2RNG4 842 aa22.18■■□□□ 1.14
HOXA9-203ENST00000465941 PUS7LQ9H0K6 701 aaKnown RBP22.18■■□□□ 1.14
HOXA9-203ENST00000465941 ABT1Q9ULW3 272 aaKnown RBP22.18■■□□□ 1.14
HOXA9-203ENST00000465941 SSC5DA1L4H1 1573 aa22.17■■□□□ 1.14
HOXA9-203ENST00000465941 PPP1R12BO60237 982 aaPredicted RBP22.17■■□□□ 1.14
HOXA9-203ENST00000465941 HTRA3P83110 453 aa22.17■■□□□ 1.14
HOXA9-203ENST00000465941 TTC22Q5TAA0 569 aa22.17■■□□□ 1.14
Retrieved 100 of 20,778 RNA–protein pairs in 13.4 ms