RNA–Protein interactions for RNA: ENST00000464395.1

PITRM1-209, Transcript of pitrilysin metallopeptidase 1, humanhuman

TSL 1 (best)

Gene PITRM1, Length 3,240 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PITRM1-209ENST00000464395 ORC3Q9UBD5 711 aaPredicted RBP12.8□□□□□ -0.36
PITRM1-209ENST00000464395 HPSEQ9Y251 543 aa12.8□□□□□ -0.36
PITRM1-209ENST00000464395 PNPLA7Q6ZV29 1317 aa12.79□□□□□ -0.36
PITRM1-209ENST00000464395 PATL2C9JE40 543 aaKnown RBP12.79□□□□□ -0.36
PITRM1-209ENST00000464395 STX1AQ16623 288 aa12.79□□□□□ -0.36
PITRM1-209ENST00000464395 RAB11FIP4Q86YS3 637 aa12.79□□□□□ -0.36
PITRM1-209ENST00000464395 FSIP1Q8NA03 581 aa12.79□□□□□ -0.36
PITRM1-209ENST00000464395 MRFAP1L1Q96HT8 127 aa12.79□□□□□ -0.36
PITRM1-209ENST00000464395 PRIMPOLQ96LW4 560 aa12.79□□□□□ -0.36
PITRM1-209ENST00000464395 BPIFA3Q9BQP9 254 aa12.79□□□□□ -0.36
PITRM1-209ENST00000464395 DUOX1Q9NRD9 1551 aa12.79□□□□□ -0.36
PITRM1-209ENST00000464395 BAZ2AQ9UIF9 1905 aaKnown RBP12.79□□□□□ -0.36
PITRM1-209ENST00000464395 U2AF2P26368 475 aaKnown RBP eCLIP12.79□□□□□ -0.36
PITRM1-209ENST00000464395 LRMPQ12912 555 aa12.79□□□□□ -0.36
PITRM1-209ENST00000464395 NBPF11Q86T75 865 aa12.79□□□□□ -0.36
PITRM1-209ENST00000464395 ZNF710Q8N1W2 664 aa12.79□□□□□ -0.36
PITRM1-209ENST00000464395 MARCH10Q8NA82 808 aaPredicted RBP12.79□□□□□ -0.36
PITRM1-209ENST00000464395 HELBQ8NG08 1087 aaPredicted RBP12.79□□□□□ -0.36
PITRM1-209ENST00000464395 MRPS27Q92552 414 aaKnown RBP12.79□□□□□ -0.36
PITRM1-209ENST00000464395 C8orf76Q96K31 380 aa12.79□□□□□ -0.36
PITRM1-209ENST00000464395 HSD3B7Q9H2F3 369 aa12.79□□□□□ -0.36
PITRM1-209ENST00000464395 MYH2Q9UKX2 1941 aa12.79□□□□□ -0.36
PITRM1-209ENST00000464395 ZNF804BA4D1E1 1349 aa12.79□□□□□ -0.36
PITRM1-209ENST00000464395 UBE2Q2LH0YL09 131 aa12.79□□□□□ -0.36
PITRM1-209ENST00000464395 CRKLP46109 303 aaKnown RBP12.79□□□□□ -0.36
PITRM1-209ENST00000464395 CCDC186Q7Z3E2 898 aa12.79□□□□□ -0.36
PITRM1-209ENST00000464395 IFNL3Q8IZI9 196 aa12.79□□□□□ -0.36
PITRM1-209ENST00000464395 MAST2Q6P0Q8 1798 aa12.78□□□□□ -0.36
PITRM1-209ENST00000464395 LIFRP42702 1097 aa12.78□□□□□ -0.36
PITRM1-209ENST00000464395 CACTINQ8WUQ7 758 aaKnown RBP12.78□□□□□ -0.36
PITRM1-209ENST00000464395 TMEM87BQ96K49 555 aa12.78□□□□□ -0.36
PITRM1-209ENST00000464395 CCDC87Q9NVE4 849 aa12.78□□□□□ -0.36
PITRM1-209ENST00000464395 STK36Q9NRP7 1315 aa12.78□□□□□ -0.36
PITRM1-209ENST00000464395 A0A1B0GVL5 298 aa12.78□□□□□ -0.36
PITRM1-209ENST00000464395 B4E1Z4 1266 aa12.78□□□□□ -0.36
PITRM1-209ENST00000464395 DHX16O60231 1041 aaKnown RBP12.78□□□□□ -0.36
PITRM1-209ENST00000464395 NCAPHQ15003 741 aa12.78□□□□□ -0.36
PITRM1-209ENST00000464395 SLC39A14Q15043 492 aa12.77□□□□□ -0.36
PITRM1-209ENST00000464395 ANO1Q5XXA6 986 aa12.77□□□□□ -0.36
PITRM1-209ENST00000464395 KCNG4Q8TDN1 519 aa12.77□□□□□ -0.36
PITRM1-209ENST00000464395 ERCC4Q92889 916 aaPredicted RBP12.77□□□□□ -0.36
PITRM1-209ENST00000464395 ZSWIM5Q9P217 1185 aa12.77□□□□□ -0.36
PITRM1-209ENST00000464395 THRAP3Q9Y2W1 955 aaKnown RBP12.77□□□□□ -0.36
PITRM1-209ENST00000464395 POLR3DP05423 398 aaPredicted RBP12.77□□□□□ -0.37
PITRM1-209ENST00000464395 ADGRA1Q86SQ6 560 aa12.77□□□□□ -0.37
PITRM1-209ENST00000464395 SHISA4Q96DD7 197 aa12.77□□□□□ -0.37
PITRM1-209ENST00000464395 PDCL3Q9H2J4 239 aa12.77□□□□□ -0.37
PITRM1-209ENST00000464395 SPTLC2O15270 562 aa12.77□□□□□ -0.37
PITRM1-209ENST00000464395 IDH1O75874 414 aaKnown RBP12.77□□□□□ -0.37
PITRM1-209ENST00000464395 CMA1P23946 247 aa12.77□□□□□ -0.37
PITRM1-209ENST00000464395 RBM6P78332 1123 aaKnown RBP12.77□□□□□ -0.37
PITRM1-209ENST00000464395 KCND1Q9NSA2 647 aa12.77□□□□□ -0.37
PITRM1-209ENST00000464395 KIAA1468Q9P260 1216 aa12.77□□□□□ -0.37
PITRM1-209ENST00000464395 TAF1LQ8IZX4 1826 aa12.76□□□□□ -0.37
PITRM1-209ENST00000464395 ME1P48163 572 aa12.76□□□□□ -0.37
PITRM1-209ENST00000464395 HSP90AA2PQ14568 343 aaPredicted RBP12.76□□□□□ -0.37
PITRM1-209ENST00000464395 STAG1Q8WVM7 1258 aa12.76□□□□□ -0.37
PITRM1-209ENST00000464395 PRKAB2O43741 272 aa12.76□□□□□ -0.37
PITRM1-209ENST00000464395 KRT40Q6A162 431 aa12.76□□□□□ -0.37
PITRM1-209ENST00000464395 SHC4Q6S5L8 630 aa12.76□□□□□ -0.37
PITRM1-209ENST00000464395 RALYLQ86SE5 291 aaKnown RBP12.76□□□□□ -0.37
PITRM1-209ENST00000464395 LCORLQ8N3X6 602 aa12.76□□□□□ -0.37
PITRM1-209ENST00000464395 ZNF384Q8TF68 577 aa12.76□□□□□ -0.37
PITRM1-209ENST00000464395 UTP14AQ9BVJ6 771 aaKnown RBP12.76□□□□□ -0.37
PITRM1-209ENST00000464395 TUBE1Q9UJT0 475 aa12.76□□□□□ -0.37
PITRM1-209ENST00000464395 PPP6R2O75170 966 aa12.75□□□□□ -0.37
PITRM1-209ENST00000464395 CTDSPL2Q05D32 466 aa12.75□□□□□ -0.37
PITRM1-209ENST00000464395 ARID5BQ14865 1188 aa12.75□□□□□ -0.37
PITRM1-209ENST00000464395 CCDC73Q6ZRK6 1079 aa12.75□□□□□ -0.37
PITRM1-209ENST00000464395 C3orf67Q6ZVT6 689 aa12.75□□□□□ -0.37
PITRM1-209ENST00000464395 MAGEB6Q8N7X4 407 aa12.75□□□□□ -0.37
PITRM1-209ENST00000464395 CDCA7Q9BWT1 371 aaPredicted RBP12.75□□□□□ -0.37
PITRM1-209ENST00000464395 EIF4ENIF1Q9NRA8 985 aaKnown RBP12.75□□□□□ -0.37
PITRM1-209ENST00000464395 SPATA31A5Q5VU36 1347 aa12.75□□□□□ -0.37
PITRM1-209ENST00000464395 SPATA31A7Q8IWB4 1347 aa12.75□□□□□ -0.37
PITRM1-209ENST00000464395 LOC102724428A0A0B4J2F2 783 aa12.75□□□□□ -0.37
PITRM1-209ENST00000464395 WTIPA6NIX2 430 aaPredicted RBP12.75□□□□□ -0.37
PITRM1-209ENST00000464395 CTIFO43310 598 aaKnown RBP12.75□□□□□ -0.37
PITRM1-209ENST00000464395 MBD4O95243 580 aa12.75□□□□□ -0.37
PITRM1-209ENST00000464395 RXRAP19793 462 aa12.75□□□□□ -0.37
PITRM1-209ENST00000464395 BCAMP50895 628 aa12.75□□□□□ -0.37
PITRM1-209ENST00000464395 SIK1P57059 783 aa12.75□□□□□ -0.37
PITRM1-209ENST00000464395 CCZ1BP86790 482 aa12.75□□□□□ -0.37
PITRM1-209ENST00000464395 CCZ1P86791 482 aaPredicted RBP12.75□□□□□ -0.37
PITRM1-209ENST00000464395 DPCR1Q3MIW9 517 aa12.75□□□□□ -0.37
PITRM1-209ENST00000464395 ARMT1Q9H993 441 aa12.75□□□□□ -0.37
PITRM1-209ENST00000464395 ANO10Q9NW15 660 aa12.75□□□□□ -0.37
PITRM1-209ENST00000464395 GOLGA6L6A8MZA4 724 aa12.75□□□□□ -0.37
PITRM1-209ENST00000464395 SLC5A1P13866 664 aa12.75□□□□□ -0.37
PITRM1-209ENST00000464395 PFKFB1P16118 471 aa12.75□□□□□ -0.37
PITRM1-209ENST00000464395 METAP2P50579 478 aaKnown RBP eCLIP12.75□□□□□ -0.37
PITRM1-209ENST00000464395 PLCB2Q00722 1185 aa12.75□□□□□ -0.37
PITRM1-209ENST00000464395 PARP10Q53GL7 1025 aa12.75□□□□□ -0.37
PITRM1-209ENST00000464395 VPS37DQ86XT2 251 aa12.75□□□□□ -0.37
PITRM1-209ENST00000464395 LRRC8AQ8IWT6 810 aa12.75□□□□□ -0.37
PITRM1-209ENST00000464395 PHKBQ93100 1093 aa12.75□□□□□ -0.37
PITRM1-209ENST00000464395 TIGD1Q96MW7 591 aa12.75□□□□□ -0.37
PITRM1-209ENST00000464395 TRIM5Q9C035 493 aa12.75□□□□□ -0.37
PITRM1-209ENST00000464395 KINO60870 393 aaKnown RBP12.74□□□□□ -0.37
PITRM1-209ENST00000464395 ZNF202O95125 648 aa12.74□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 15.7 ms