RNA–Protein interactions for RNA: ENST00000462352.5

CPNE1-221, Transcript of copine 1, humanhuman

TSL 2

Gene CPNE1, Length 625 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE1-221ENST00000462352 ZNF532Q9HCE3 1301 aa14.28□□□□□ -0.12
CPNE1-221ENST00000462352 ZNF70Q9UC06 446 aaPredicted RBP14.28□□□□□ -0.12
CPNE1-221ENST00000462352 TCRBV5S4A2TA0A5A2 114 aa14.27□□□□□ -0.13
CPNE1-221ENST00000462352 TRIM6-TRIM34B2RNG4 842 aa14.27□□□□□ -0.13
CPNE1-221ENST00000462352 CHGBP05060 677 aa14.27□□□□□ -0.13
CPNE1-221ENST00000462352 TTC22Q5TAA0 569 aa14.27□□□□□ -0.13
CPNE1-221ENST00000462352 ZSCAN25Q6NSZ9 544 aa14.27□□□□□ -0.13
CPNE1-221ENST00000462352 CDC42EP5Q6NZY7 148 aa14.27□□□□□ -0.13
CPNE1-221ENST00000462352 FSD1Q9BTV5 496 aa14.27□□□□□ -0.13
CPNE1-221ENST00000462352 VEZTQ9HBM0 779 aa14.27□□□□□ -0.13
CPNE1-221ENST00000462352 USP40Q9NVE5 1235 aa14.27□□□□□ -0.13
CPNE1-221ENST00000462352 ECM29Q5VYK3 1845 aa14.27□□□□□ -0.13
CPNE1-221ENST00000462352 GSPT1P15170 499 aaKnown RBP14.26□□□□□ -0.13
CPNE1-221ENST00000462352 RGS3P49796 1198 aa14.26□□□□□ -0.13
CPNE1-221ENST00000462352 CACNB3P54284 484 aa14.26□□□□□ -0.13
CPNE1-221ENST00000462352 UBE3CQ15386 1083 aa14.26□□□□□ -0.13
CPNE1-221ENST00000462352 SLFNL1Q499Z3 407 aa14.26□□□□□ -0.13
CPNE1-221ENST00000462352 CDC37L1Q7L3B6 337 aa14.26□□□□□ -0.13
CPNE1-221ENST00000462352 KRT26Q7Z3Y9 468 aa14.26□□□□□ -0.13
CPNE1-221ENST00000462352 CNTROBQ8N137 903 aa14.26□□□□□ -0.13
CPNE1-221ENST00000462352 MIGA1Q8NAN2 632 aa14.26□□□□□ -0.13
CPNE1-221ENST00000462352 RILPL2Q969X0 211 aa14.26□□□□□ -0.13
CPNE1-221ENST00000462352 NOL10Q9BSC4 688 aaKnown RBP14.26□□□□□ -0.13
CPNE1-221ENST00000462352 GLIS2Q9BZE0 524 aaPredicted RBP14.26□□□□□ -0.13
CPNE1-221ENST00000462352 AATFQ9NY61 560 aaKnown RBP eCLIP14.26□□□□□ -0.13
CPNE1-221ENST00000462352 TMOD2Q9NZR1 351 aa14.26□□□□□ -0.13
CPNE1-221ENST00000462352 SCAF8Q9UPN6 1271 aaKnown RBP14.26□□□□□ -0.13
CPNE1-221ENST00000462352 RNF113AO15541 343 aaKnown RBP14.25□□□□□ -0.13
CPNE1-221ENST00000462352 BAG3O95817 575 aa14.25□□□□□ -0.13
CPNE1-221ENST00000462352 RHBDL3P58872 404 aa14.25□□□□□ -0.13
CPNE1-221ENST00000462352 PPP4CP60510 307 aa14.25□□□□□ -0.13
CPNE1-221ENST00000462352 LRRFIP1Q32MZ4 808 aaKnown RBP14.25□□□□□ -0.13
CPNE1-221ENST00000462352 USP48Q86UV5 1035 aa14.25□□□□□ -0.13
CPNE1-221ENST00000462352 APOBEC3FQ8IUX4 373 aaKnown RBP14.25□□□□□ -0.13
CPNE1-221ENST00000462352 SULF1Q8IWU6 871 aa14.25□□□□□ -0.13
CPNE1-221ENST00000462352 MYH7P12883 1935 aa14.24□□□□□ -0.13
CPNE1-221ENST00000462352 TCP10L2B9ZVM9 353 aa14.24□□□□□ -0.13
CPNE1-221ENST00000462352 ADM5C9JUS6 153 aa14.24□□□□□ -0.13
CPNE1-221ENST00000462352 ITGBL1O95965 494 aaPredicted RBP14.24□□□□□ -0.13
CPNE1-221ENST00000462352 ZFYP08048 801 aaPredicted RBP14.24□□□□□ -0.13
CPNE1-221ENST00000462352 DYNLL1P63167 89 aaKnown RBP14.24□□□□□ -0.13
CPNE1-221ENST00000462352 FSTL1Q12841 308 aa14.24□□□□□ -0.13
CPNE1-221ENST00000462352 TNFAIP1Q13829 316 aa14.24□□□□□ -0.13
CPNE1-221ENST00000462352 FKBP1CQ5VVH2 108 aa14.24□□□□□ -0.13
CPNE1-221ENST00000462352 DLK2Q6UY11 383 aa14.24□□□□□ -0.13
CPNE1-221ENST00000462352 SH3RF3Q8TEJ3 882 aaPredicted RBP14.24□□□□□ -0.13
CPNE1-221ENST00000462352 RIOK1Q9BRS2 568 aaKnown RBP14.24□□□□□ -0.13
CPNE1-221ENST00000462352 RFX7Q2KHR2 1363 aa14.23□□□□□ -0.13
CPNE1-221ENST00000462352 MAGEB6P1A0A0J9YX57 407 aa14.23□□□□□ -0.13
CPNE1-221ENST00000462352 TRAF5O00463 557 aa14.23□□□□□ -0.13
CPNE1-221ENST00000462352 WDHD1O75717 1129 aaPredicted RBP14.23□□□□□ -0.13
CPNE1-221ENST00000462352 PLCG2P16885 1265 aa14.23□□□□□ -0.13
CPNE1-221ENST00000462352 SDSP20132 328 aa14.23□□□□□ -0.13
CPNE1-221ENST00000462352 TNNI2P48788 182 aa14.23□□□□□ -0.13
CPNE1-221ENST00000462352 NFIAQ12857 509 aa14.23□□□□□ -0.13
CPNE1-221ENST00000462352 CERS3Q8IU89 383 aa14.23□□□□□ -0.13
CPNE1-221ENST00000462352 TEX11Q8IYF3 940 aa14.23□□□□□ -0.13
CPNE1-221ENST00000462352 APPBP2Q92624 585 aa14.23□□□□□ -0.13
CPNE1-221ENST00000462352 IDI2Q9BXS1 227 aa14.23□□□□□ -0.13
CPNE1-221ENST00000462352 PUS7LQ9H0K6 701 aaKnown RBP14.23□□□□□ -0.13
CPNE1-221ENST00000462352 DEFB129Q9H1M3 183 aa14.23□□□□□ -0.13
CPNE1-221ENST00000462352 POLR2AP24928 1970 aaKnown RBP14.23□□□□□ -0.13
CPNE1-221ENST00000462352 CNTNAP1P78357 1384 aa14.22□□□□□ -0.13
CPNE1-221ENST00000462352 FMR1Q06787 632 aaKnown RBP eCLIP14.22□□□□□ -0.13
CPNE1-221ENST00000462352 RASA3Q14644 834 aa14.22□□□□□ -0.13
CPNE1-221ENST00000462352 FAM83AQ86UY5 434 aa14.22□□□□□ -0.13
CPNE1-221ENST00000462352 TICAM2Q86XR7 235 aa14.22□□□□□ -0.13
CPNE1-221ENST00000462352 LCORLQ8N3X6 602 aa14.22□□□□□ -0.13
CPNE1-221ENST00000462352 OSBP2Q969R2 916 aa14.22□□□□□ -0.13
CPNE1-221ENST00000462352 FAM198AQ9UFP1 575 aa14.22□□□□□ -0.13
CPNE1-221ENST00000462352 PPP2R3BQ9Y5P8 575 aa14.22□□□□□ -0.13
CPNE1-221ENST00000462352 GTF3C3Q9Y5Q9 886 aa14.22□□□□□ -0.13
CPNE1-221ENST00000462352 PASKQ96RG2 1323 aa14.21□□□□□ -0.13
CPNE1-221ENST00000462352 MBD4O95243 580 aa14.21□□□□□ -0.13
CPNE1-221ENST00000462352 PICALMQ13492 652 aa14.21□□□□□ -0.13
CPNE1-221ENST00000462352 ZMYM1Q5SVZ6 1142 aa14.21□□□□□ -0.13
CPNE1-221ENST00000462352 PRAMEF18Q5VWM3 479 aa14.21□□□□□ -0.13
CPNE1-221ENST00000462352 FAM151AQ8WW52 585 aa14.21□□□□□ -0.13
CPNE1-221ENST00000462352 AIDAQ96BJ3 306 aa14.21□□□□□ -0.13
CPNE1-221ENST00000462352 CDCA5Q96FF9 252 aa14.21□□□□□ -0.13
CPNE1-221ENST00000462352 TMEM39BQ9GZU3 492 aa14.21□□□□□ -0.13
CPNE1-221ENST00000462352 ARMT1Q9H993 441 aa14.21□□□□□ -0.13
CPNE1-221ENST00000462352 DDX4Q9NQI0 724 aaKnown RBP14.21□□□□□ -0.13
CPNE1-221ENST00000462352 ENTPD3O75355 529 aa14.2□□□□□ -0.14
CPNE1-221ENST00000462352 TCP10Q12799 353 aa14.2□□□□□ -0.14
CPNE1-221ENST00000462352 ZFPM1Q8IX07 1006 aa14.2□□□□□ -0.14
CPNE1-221ENST00000462352 TGFBRAP1Q8WUH2 860 aa14.2□□□□□ -0.14
CPNE1-221ENST00000462352 TEPSINQ96N21 525 aa14.2□□□□□ -0.14
CPNE1-221ENST00000462352 SEC62Q99442 399 aaKnown RBP14.2□□□□□ -0.14
CPNE1-221ENST00000462352 AK9Q5TCS8 1911 aa14.19□□□□□ -0.14
CPNE1-221ENST00000462352 M0R2C6 588 aa14.19□□□□□ -0.14
CPNE1-221ENST00000462352 NPM3O75607 178 aaKnown RBP14.19□□□□□ -0.14
CPNE1-221ENST00000462352 NMIQ13287 307 aaPredicted RBP14.19□□□□□ -0.14
CPNE1-221ENST00000462352 BMP2KLQ5H9B9 411 aa14.19□□□□□ -0.14
CPNE1-221ENST00000462352 MAPKAPK5Q8IW41 473 aa14.19□□□□□ -0.14
CPNE1-221ENST00000462352 CDAN1Q8IWY9 1227 aa14.19□□□□□ -0.14
CPNE1-221ENST00000462352 FAM227BQ96M60 508 aa14.19□□□□□ -0.14
CPNE1-221ENST00000462352 CRNKL1Q9BZJ0 848 aaKnown RBP14.19□□□□□ -0.14
CPNE1-221ENST00000462352 OSBPL5Q9H0X9 879 aaPredicted RBP14.19□□□□□ -0.14
CPNE1-221ENST00000462352 HELLSQ9NRZ9 838 aa14.19□□□□□ -0.14
Retrieved 100 of 20,778 RNA–protein pairs in 101.7 ms