RNA–Protein interactions for RNA: ENST00000460810.1

CCDC58-202, Transcript of coiled-coil domain containing 58, humanhuman

TSL 2

Gene CCDC58, Length 573 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC58-202ENST00000460810 AP4E1Q9UPM8 1137 aa6.7□□□□□ -1.34
CCDC58-202ENST00000460810 PAPLNO95428 1278 aa6.69□□□□□ -1.34
CCDC58-202ENST00000460810 B3GALT4O96024 378 aa6.69□□□□□ -1.34
CCDC58-202ENST00000460810 POLR3DP05423 398 aaPredicted RBP6.69□□□□□ -1.34
CCDC58-202ENST00000460810 CYP27C1Q4G0S4 372 aa6.69□□□□□ -1.34
CCDC58-202ENST00000460810 KIAA0319Q5VV43 1072 aa6.69□□□□□ -1.34
CCDC58-202ENST00000460810 TRIM56Q9BRZ2 755 aaKnown RBP6.69□□□□□ -1.34
CCDC58-202ENST00000460810 GZF1Q9H116 711 aaPredicted RBP6.69□□□□□ -1.34
CCDC58-202ENST00000460810 CCDC87Q9NVE4 849 aa6.69□□□□□ -1.34
CCDC58-202ENST00000460810 NEFLP07196 543 aa6.68□□□□□ -1.34
CCDC58-202ENST00000460810 AOC2O75106 756 aa6.67□□□□□ -1.34
CCDC58-202ENST00000460810 ITPKAP23677 461 aa6.67□□□□□ -1.34
CCDC58-202ENST00000460810 PTPN12Q05209 780 aaKnown RBP6.67□□□□□ -1.34
CCDC58-202ENST00000460810 PLCL1Q15111 1095 aa6.67□□□□□ -1.34
CCDC58-202ENST00000460810 TMCO4Q5TGY1 634 aa6.67□□□□□ -1.34
CCDC58-202ENST00000460810 WFDC3Q8IUB2 231 aa6.67□□□□□ -1.34
CCDC58-202ENST00000460810 ZNF576Q9H609 170 aa6.67□□□□□ -1.34
CCDC58-202ENST00000460810 DAGLAQ9Y4D2 1042 aa6.67□□□□□ -1.34
CCDC58-202ENST00000460810 DYNC1LI2O43237 492 aaPredicted RBP6.66□□□□□ -1.34
CCDC58-202ENST00000460810 ECEL1O95672 775 aa6.66□□□□□ -1.34
CCDC58-202ENST00000460810 MFAP1P55081 439 aaKnown RBP6.66□□□□□ -1.34
CCDC58-202ENST00000460810 PDE4CQ08493 712 aa6.66□□□□□ -1.34
CCDC58-202ENST00000460810 AP3B2Q13367 1082 aa6.66□□□□□ -1.34
CCDC58-202ENST00000460810 ZNF792Q3KQV3 632 aa6.66□□□□□ -1.34
CCDC58-202ENST00000460810 WDR18Q9BV38 432 aa6.66□□□□□ -1.34
CCDC58-202ENST00000460810 USTQ9Y2C2 406 aa6.66□□□□□ -1.34
CCDC58-202ENST00000460810 SPRED2Q7Z698 418 aa6.65□□□□□ -1.34
CCDC58-202ENST00000460810 ATG4DQ86TL0 474 aaPredicted RBP6.65□□□□□ -1.34
CCDC58-202ENST00000460810 NETO1Q8TDF5 533 aa6.65□□□□□ -1.34
CCDC58-202ENST00000460810 ABL1P00519 1130 aa6.64□□□□□ -1.35
CCDC58-202ENST00000460810 PDE3AQ14432 1141 aa6.64□□□□□ -1.35
CCDC58-202ENST00000460810 B4GALNT3Q6L9W6 998 aa6.64□□□□□ -1.35
CCDC58-202ENST00000460810 PHLDB3Q6NSJ2 640 aa6.64□□□□□ -1.35
CCDC58-202ENST00000460810 ZNF574Q6ZN55 896 aaPredicted RBP6.64□□□□□ -1.35
CCDC58-202ENST00000460810 ZNF428Q96B54 188 aa6.64□□□□□ -1.35
CCDC58-202ENST00000460810 PPP1R9AQ9ULJ8 1098 aa6.64□□□□□ -1.35
CCDC58-202ENST00000460810 SLFN14P0C7P3 912 aa6.63□□□□□ -1.35
CCDC58-202ENST00000460810 FUT4P22083 530 aa6.63□□□□□ -1.35
CCDC58-202ENST00000460810 RPS26P11Q5JNZ5 115 aaPredicted RBP6.63□□□□□ -1.35
CCDC58-202ENST00000460810 CARMIL2Q6F5E8 1435 aa6.63□□□□□ -1.35
CCDC58-202ENST00000460810 EHD4Q9H223 541 aa6.63□□□□□ -1.35
CCDC58-202ENST00000460810 MKNK2Q9HBH9 465 aa6.63□□□□□ -1.35
CCDC58-202ENST00000460810 CRIM1Q9NZV1 1036 aa6.63□□□□□ -1.35
CCDC58-202ENST00000460810 EGFL7Q9UHF1 273 aa6.63□□□□□ -1.35
CCDC58-202ENST00000460810 VAV3Q9UKW4 847 aa6.63□□□□□ -1.35
CCDC58-202ENST00000460810 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP6.63□□□□□ -1.35
CCDC58-202ENST00000460810 DBX1A6NMT0 343 aa6.62□□□□□ -1.35
CCDC58-202ENST00000460810 TMPRSS2O15393 492 aa6.62□□□□□ -1.35
CCDC58-202ENST00000460810 FARP2O94887 1054 aaPredicted RBP6.62□□□□□ -1.35
CCDC58-202ENST00000460810 HNRNPUQ00839 825 aaKnown RBP eCLIP6.62□□□□□ -1.35
CCDC58-202ENST00000460810 PRKCQQ04759 706 aa6.62□□□□□ -1.35
CCDC58-202ENST00000460810 BNIP3Q12983 259 aa6.62□□□□□ -1.35
CCDC58-202ENST00000460810 GLIS3Q8NEA6 775 aa6.62□□□□□ -1.35
CCDC58-202ENST00000460810 ATXN3LQ9H3M9 355 aa6.62□□□□□ -1.35
CCDC58-202ENST00000460810 LGR6Q9HBX8 967 aa6.62□□□□□ -1.35
CCDC58-202ENST00000460810 ANO2Q9NQ90 1003 aa6.62□□□□□ -1.35
CCDC58-202ENST00000460810 BRPF3Q9ULD4 1205 aa6.62□□□□□ -1.35
CCDC58-202ENST00000460810 CPNE3O75131 537 aaKnown RBP6.61□□□□□ -1.35
CCDC58-202ENST00000460810 FAM87AP0C7U9 286 aa6.61□□□□□ -1.35
CCDC58-202ENST00000460810 CD8BP10966 210 aa6.61□□□□□ -1.35
CCDC58-202ENST00000460810 ZNF211Q13398 564 aaPredicted RBP6.61□□□□□ -1.35
CCDC58-202ENST00000460810 ZNF648Q5T619 568 aaPredicted RBP6.61□□□□□ -1.35
CCDC58-202ENST00000460810 USPL1Q5W0Q7 1092 aa6.61□□□□□ -1.35
CCDC58-202ENST00000460810 PLD6Q8N2A8 252 aaKnown RBP6.61□□□□□ -1.35
CCDC58-202ENST00000460810 TMEM40Q8WWA1 233 aa6.61□□□□□ -1.35
CCDC58-202ENST00000460810 PIDD1Q9HB75 910 aa6.61□□□□□ -1.35
CCDC58-202ENST00000460810 ICMTO60725 284 aa6.6□□□□□ -1.35
CCDC58-202ENST00000460810 LIG1P18858 919 aa6.6□□□□□ -1.35
CCDC58-202ENST00000460810 ID3Q02535 119 aa6.6□□□□□ -1.35
CCDC58-202ENST00000460810 PDE3BQ13370 1112 aa6.6□□□□□ -1.35
CCDC58-202ENST00000460810 IFI16Q16666 785 aaKnown RBP6.6□□□□□ -1.35
CCDC58-202ENST00000460810 PRPF40BQ6NWY9 871 aaKnown RBP6.6□□□□□ -1.35
CCDC58-202ENST00000460810 SMYD4Q8IYR2 804 aaPredicted RBP6.6□□□□□ -1.35
CCDC58-202ENST00000460810 FAM168AQ92567 244 aa6.6□□□□□ -1.35
CCDC58-202ENST00000460810 FANCD2OSQ96PS1 177 aa6.6□□□□□ -1.35
CCDC58-202ENST00000460810 KRTAP4-9Q9BYQ8 210 aa6.6□□□□□ -1.35
CCDC58-202ENST00000460810 RC3H2Q9HBD1 1191 aaKnown RBP6.6□□□□□ -1.35
CCDC58-202ENST00000460810 KRT82Q9NSB4 513 aa6.6□□□□□ -1.35
CCDC58-202ENST00000460810 LOC105371045A0A1W2PR82 267 aa6.59□□□□□ -1.35
CCDC58-202ENST00000460810 RNASE1P07998 156 aaKnown RBP6.59□□□□□ -1.35
CCDC58-202ENST00000460810 CDK5R2Q13319 367 aa6.59□□□□□ -1.35
CCDC58-202ENST00000460810 KIF4BQ2VIQ3 1234 aa6.59□□□□□ -1.35
CCDC58-202ENST00000460810 CITED4Q96RK1 184 aa6.59□□□□□ -1.35
CCDC58-202ENST00000460810 CCDC86Q9H6F5 360 aaKnown RBP6.59□□□□□ -1.35
CCDC58-202ENST00000460810 ABCB6Q9NP58 842 aa6.59□□□□□ -1.35
CCDC58-202ENST00000460810 NPHS2Q9NP85 383 aa6.59□□□□□ -1.35
CCDC58-202ENST00000460810 TMEM238LA0A1B0GVL6 79 aa6.58□□□□□ -1.36
CCDC58-202ENST00000460810 RBM25P49756 843 aaKnown RBP6.58□□□□□ -1.36
CCDC58-202ENST00000460810 PI4K2BQ8TCG2 481 aa6.58□□□□□ -1.36
CCDC58-202ENST00000460810 WDR89Q96FK6 387 aaPredicted RBP6.58□□□□□ -1.36
CCDC58-202ENST00000460810 DNAJC25Q9H1X3 360 aa6.58□□□□□ -1.36
CCDC58-202ENST00000460810 DISC1Q9NRI5 854 aa6.58□□□□□ -1.36
CCDC58-202ENST00000460810 MBNL3Q9NUK0 354 aaKnown RBP6.58□□□□□ -1.36
CCDC58-202ENST00000460810 PCOLCE2Q9UKZ9 415 aa6.58□□□□□ -1.36
CCDC58-202ENST00000460810 TRAK1Q9UPV9 953 aa6.58□□□□□ -1.36
CCDC58-202ENST00000460810 PCDHGC5Q9Y5F6 944 aa6.58□□□□□ -1.36
CCDC58-202ENST00000460810 TMEM265A0A087WTH1 108 aa6.57□□□□□ -1.36
CCDC58-202ENST00000460810 NDUFB5O43674 189 aa6.57□□□□□ -1.36
CCDC58-202ENST00000460810 ZNF862O60290 1169 aa6.57□□□□□ -1.36
CCDC58-202ENST00000460810 ORC1Q13415 861 aa6.57□□□□□ -1.36
Retrieved 100 of 20,778 RNA–protein pairs in 54.2 ms