RNA–Protein interactions for RNA: ENST00000457642.1

HMGN1P18-201, Transcript of high mobility group nucleosome binding domain 1 pseudogene 18, humanhuman

BASIC

Gene HMGN1P18, Length 277 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGN1P18-201ENST00000457642 NAPBQ9H115 298 aa3.83□□□□□ -1.8
HMGN1P18-201ENST00000457642 RNF41Q9H4P4 317 aaPredicted RBP3.83□□□□□ -1.8
HMGN1P18-201ENST00000457642 ZBTB3Q9H5J0 574 aa3.83□□□□□ -1.8
HMGN1P18-201ENST00000457642 BRMS1Q9HCU9 246 aa3.83□□□□□ -1.8
HMGN1P18-201ENST00000457642 CNNM1Q9NRU3 951 aa3.83□□□□□ -1.8
HMGN1P18-201ENST00000457642 CALCOCO1Q9P1Z2 691 aa3.83□□□□□ -1.8
HMGN1P18-201ENST00000457642 PRDM4Q9UKN5 801 aa3.83□□□□□ -1.8
HMGN1P18-201ENST00000457642 ZHX1Q9UKY1 873 aaPredicted RBP3.83□□□□□ -1.8
HMGN1P18-201ENST00000457642 ZNF215Q9UL58 517 aaPredicted RBP3.83□□□□□ -1.8
HMGN1P18-201ENST00000457642 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP3.83□□□□□ -1.8
HMGN1P18-201ENST00000457642 SLC12A7Q9Y666 1083 aa3.83□□□□□ -1.8
HMGN1P18-201ENST00000457642 CLIC4Q9Y696 253 aa3.83□□□□□ -1.8
HMGN1P18-201ENST00000457642 NDUFB9Q9Y6M9 179 aa3.83□□□□□ -1.8
HMGN1P18-201ENST00000457642 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP3.83□□□□□ -1.8
HMGN1P18-201ENST00000457642 MORC2Q9Y6X9 1032 aaPredicted RBP3.83□□□□□ -1.8
HMGN1P18-201ENST00000457642 CDHR2Q9BYE9 1310 aa3.83□□□□□ -1.8
HMGN1P18-201ENST00000457642 RTL9Q8NET4 1388 aa3.83□□□□□ -1.8
HMGN1P18-201ENST00000457642 PAPPAQ13219 1627 aa3.83□□□□□ -1.8
HMGN1P18-201ENST00000457642 COL18A1P39060 1754 aa3.83□□□□□ -1.8
HMGN1P18-201ENST00000457642 UBR2Q8IWV8 1755 aa3.83□□□□□ -1.8
HMGN1P18-201ENST00000457642 C4AP0C0L4 1744 aa3.82□□□□□ -1.8
HMGN1P18-201ENST00000457642 C4BP0C0L5 1744 aa3.82□□□□□ -1.8
HMGN1P18-201ENST00000457642 MROH5Q6ZUA9 1318 aa3.82□□□□□ -1.8
HMGN1P18-201ENST00000457642 WDR17Q8IZU2 1322 aa3.82□□□□□ -1.8
HMGN1P18-201ENST00000457642 FAM237AA0A1B0GTK4 181 aa3.82□□□□□ -1.8
HMGN1P18-201ENST00000457642 USP27XA6NNY8 438 aa3.82□□□□□ -1.8
HMGN1P18-201ENST00000457642 EFCAB8A8MWE9 144 aa3.82□□□□□ -1.8
HMGN1P18-201ENST00000457642 SH2B2O14492 632 aaPredicted RBP3.82□□□□□ -1.8
HMGN1P18-201ENST00000457642 IFIT3O14879 490 aaKnown RBP3.82□□□□□ -1.8
HMGN1P18-201ENST00000457642 ERLIN1O75477 346 aa3.82□□□□□ -1.8
HMGN1P18-201ENST00000457642 IDH1O75874 414 aaKnown RBP3.82□□□□□ -1.8
HMGN1P18-201ENST00000457642 URI1O94763 535 aaPredicted RBP3.82□□□□□ -1.8
HMGN1P18-201ENST00000457642 FGAP02671 866 aa3.82□□□□□ -1.8
HMGN1P18-201ENST00000457642 SLC5A1P13866 664 aa3.82□□□□□ -1.8
HMGN1P18-201ENST00000457642 FDPSP14324 419 aaKnown RBP3.82□□□□□ -1.8
HMGN1P18-201ENST00000457642 IL2RBP14784 551 aa3.82□□□□□ -1.8
HMGN1P18-201ENST00000457642 LMOD1P29536 600 aaPredicted RBP3.82□□□□□ -1.8
HMGN1P18-201ENST00000457642 MARCKSP29966 332 aaPredicted RBP3.82□□□□□ -1.8
HMGN1P18-201ENST00000457642 CASQ1P31415 396 aa3.82□□□□□ -1.8
HMGN1P18-201ENST00000457642 LIFRP42702 1097 aa3.82□□□□□ -1.8
HMGN1P18-201ENST00000457642 ZAP70P43403 619 aa3.82□□□□□ -1.8
HMGN1P18-201ENST00000457642 RCAN1P53805 252 aa3.82□□□□□ -1.8
HMGN1P18-201ENST00000457642 ETF1P62495 437 aaKnown RBP3.82□□□□□ -1.8
HMGN1P18-201ENST00000457642 MAP3K12Q12852 859 aa3.82□□□□□ -1.8
HMGN1P18-201ENST00000457642 TRIM28Q13263 835 aaKnown RBP3.82□□□□□ -1.8
HMGN1P18-201ENST00000457642 TCIRG1Q13488 830 aa3.82□□□□□ -1.8
HMGN1P18-201ENST00000457642 PPP2R5BQ15173 497 aa3.82□□□□□ -1.8
HMGN1P18-201ENST00000457642 ALX1Q15699 326 aa3.82□□□□□ -1.8
HMGN1P18-201ENST00000457642 RTN1Q16799 776 aa3.82□□□□□ -1.8
HMGN1P18-201ENST00000457642 RILPL1Q5EBL4 403 aa3.82□□□□□ -1.8
HMGN1P18-201ENST00000457642 TMEM67Q5HYA8 995 aa3.82□□□□□ -1.8
HMGN1P18-201ENST00000457642 SLC9C2Q5TAH2 1124 aa3.82□□□□□ -1.8
HMGN1P18-201ENST00000457642 RESP18Q5W5W9 173 aa3.82□□□□□ -1.8
HMGN1P18-201ENST00000457642 KRT40Q6A162 431 aa3.82□□□□□ -1.8
HMGN1P18-201ENST00000457642 TTLL5Q6EMB2 1281 aa3.82□□□□□ -1.8
HMGN1P18-201ENST00000457642 OTUD7BQ6GQQ9 843 aa3.82□□□□□ -1.8
HMGN1P18-201ENST00000457642 SYT10Q6XYQ8 523 aa3.82□□□□□ -1.8
HMGN1P18-201ENST00000457642 KRBA2Q6ZNG9 492 aa3.82□□□□□ -1.8
HMGN1P18-201ENST00000457642 TTLL7Q6ZT98 887 aa3.82□□□□□ -1.8
HMGN1P18-201ENST00000457642 CHST3Q7LGC8 479 aa3.82□□□□□ -1.8
HMGN1P18-201ENST00000457642 ILDR1Q86SU0 546 aaPredicted RBP3.82□□□□□ -1.8
HMGN1P18-201ENST00000457642 PPFIBP1Q86W92 1011 aa3.82□□□□□ -1.8
HMGN1P18-201ENST00000457642 MICU3Q86XE3 530 aa3.82□□□□□ -1.8
HMGN1P18-201ENST00000457642 VPS37DQ86XT2 251 aa3.82□□□□□ -1.8
HMGN1P18-201ENST00000457642 NUTM2AQ8IVF1 878 aaPredicted RBP3.82□□□□□ -1.8
HMGN1P18-201ENST00000457642 VSTM4Q8IW00 320 aa3.82□□□□□ -1.8
HMGN1P18-201ENST00000457642 PDILTQ8N807 584 aa3.82□□□□□ -1.8
HMGN1P18-201ENST00000457642 ZBTB38Q8NAP3 1195 aaPredicted RBP3.82□□□□□ -1.8
HMGN1P18-201ENST00000457642 MLKLQ8NB16 471 aa3.82□□□□□ -1.8
HMGN1P18-201ENST00000457642 GOLGA1Q92805 767 aa3.82□□□□□ -1.8
HMGN1P18-201ENST00000457642 OSBP2Q969R2 916 aa3.82□□□□□ -1.8
HMGN1P18-201ENST00000457642 ZNF594Q96JF6 807 aaPredicted RBP3.82□□□□□ -1.8
HMGN1P18-201ENST00000457642 ZNF512BQ96KM6 892 aaPredicted RBP3.82□□□□□ -1.8
HMGN1P18-201ENST00000457642 CTAGE1Q96RT6 745 aa3.82□□□□□ -1.8
HMGN1P18-201ENST00000457642 ISCA1Q9BUE6 129 aa3.82□□□□□ -1.8
HMGN1P18-201ENST00000457642 NAA15Q9BXJ9 866 aaKnown RBP3.82□□□□□ -1.8
HMGN1P18-201ENST00000457642 SLC26A6Q9BXS9 759 aa3.82□□□□□ -1.8
HMGN1P18-201ENST00000457642 GBP3Q9H0R5 595 aa3.82□□□□□ -1.8
HMGN1P18-201ENST00000457642 TSPYL1Q9H0U9 437 aa3.82□□□□□ -1.8
HMGN1P18-201ENST00000457642 ACBD3Q9H3P7 528 aa3.82□□□□□ -1.8
HMGN1P18-201ENST00000457642 L2HGDHQ9H9P8 463 aa3.82□□□□□ -1.8
HMGN1P18-201ENST00000457642 PRDM11Q9NQV5 511 aa3.82□□□□□ -1.8
HMGN1P18-201ENST00000457642 TOMM22Q9NS69 142 aa3.82□□□□□ -1.8
HMGN1P18-201ENST00000457642 TMOD3Q9NYL9 352 aa3.82□□□□□ -1.8
HMGN1P18-201ENST00000457642 TUBE1Q9UJT0 475 aa3.82□□□□□ -1.8
HMGN1P18-201ENST00000457642 KCNH3Q9ULD8 1083 aa3.82□□□□□ -1.8
HMGN1P18-201ENST00000457642 ZNF330Q9Y3S2 320 aaPredicted RBP3.82□□□□□ -1.8
HMGN1P18-201ENST00000457642 DDX60Q8IY21 1712 aaKnown RBP3.81□□□□□ -1.8
HMGN1P18-201ENST00000457642 GLI3P10071 1580 aa3.81□□□□□ -1.8
HMGN1P18-201ENST00000457642 KCPQ6ZWJ8 1503 aa3.81□□□□□ -1.8
HMGN1P18-201ENST00000457642 TNS2Q63HR2 1409 aa3.81□□□□□ -1.8
HMGN1P18-201ENST00000457642 NID2Q14112 1375 aa3.81□□□□□ -1.8
HMGN1P18-201ENST00000457642 MROH7-TTC4A0A0A0MT08 1334 aa3.81□□□□□ -1.8
HMGN1P18-201ENST00000457642 SPATA31A3Q5VYP0 1347 aa3.81□□□□□ -1.8
HMGN1P18-201ENST00000457642 NBPF26B4DH59 902 aa3.81□□□□□ -1.8
HMGN1P18-201ENST00000457642 KIF28PB7ZC32 967 aa3.81□□□□□ -1.8
HMGN1P18-201ENST00000457642 SEMA3EO15041 775 aa3.81□□□□□ -1.8
HMGN1P18-201ENST00000457642 KIF5CO60282 957 aa3.81□□□□□ -1.8
HMGN1P18-201ENST00000457642 STX10O60499 249 aa3.81□□□□□ -1.8
HMGN1P18-201ENST00000457642 EIF3JO75822 258 aaKnown RBP3.81□□□□□ -1.8
Retrieved 100 of 20,778 RNA–protein pairs in 77.8 ms