RNA–Protein interactions for RNA: ENST00000457039.6

SMPD4-215, Transcript of sphingomyelin phosphodiesterase 4, humanhuman

TSL 5

Gene SMPD4, Length 940 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMPD4-215ENST00000457039 ADM5C9JUS6 153 aa17.16■□□□□ 0.34
SMPD4-215ENST00000457039 DLK2Q6UY11 383 aa17.16■□□□□ 0.34
SMPD4-215ENST00000457039 APOBEC3FQ8IUX4 373 aaKnown RBP17.16■□□□□ 0.34
SMPD4-215ENST00000457039 SULF1Q8IWU6 871 aa17.16■□□□□ 0.34
SMPD4-215ENST00000457039 CCDC136Q96JN2 1154 aa17.16■□□□□ 0.34
SMPD4-215ENST00000457039 RFX7Q2KHR2 1363 aa17.15■□□□□ 0.34
SMPD4-215ENST00000457039 TRAF5O00463 557 aa17.15■□□□□ 0.34
SMPD4-215ENST00000457039 PDE6AP16499 860 aa17.15■□□□□ 0.34
SMPD4-215ENST00000457039 BTDP43251 543 aa17.15■□□□□ 0.34
SMPD4-215ENST00000457039 RHBDL3P58872 404 aa17.15■□□□□ 0.34
SMPD4-215ENST00000457039 FMR1Q06787 632 aaKnown RBP eCLIP17.15■□□□□ 0.34
SMPD4-215ENST00000457039 MAGEB6Q8N7X4 407 aa17.15■□□□□ 0.34
SMPD4-215ENST00000457039 TCRBV5S4A2TA0A5A2 114 aa17.14■□□□□ 0.33
SMPD4-215ENST00000457039 CYP7A1P22680 504 aa17.14■□□□□ 0.33
SMPD4-215ENST00000457039 PPP4CP60510 307 aa17.14■□□□□ 0.33
SMPD4-215ENST00000457039 SLC9C2Q5TAH2 1124 aa17.14■□□□□ 0.33
SMPD4-215ENST00000457039 FKBP1CQ5VVH2 108 aa17.14■□□□□ 0.33
SMPD4-215ENST00000457039 KBTBD3Q8NAB2 608 aa17.14■□□□□ 0.33
SMPD4-215ENST00000457039 VEZTQ9HBM0 779 aa17.14■□□□□ 0.33
SMPD4-215ENST00000457039 USP40Q9NVE5 1235 aa17.14■□□□□ 0.33
SMPD4-215ENST00000457039 PPP4R2Q9NY27 417 aa17.14■□□□□ 0.33
SMPD4-215ENST00000457039 MAP4K4O95819 1239 aaPredicted RBP17.13■□□□□ 0.33
SMPD4-215ENST00000457039 ADD2P35612 726 aa17.13■□□□□ 0.33
SMPD4-215ENST00000457039 CACNB3P54284 484 aa17.13■□□□□ 0.33
SMPD4-215ENST00000457039 DEFB129Q9H1M3 183 aa17.13■□□□□ 0.33
SMPD4-215ENST00000457039 CNTNAP1P78357 1384 aa17.13■□□□□ 0.33
SMPD4-215ENST00000457039 WDHD1O75717 1129 aaPredicted RBP17.12■□□□□ 0.33
SMPD4-215ENST00000457039 CHGBP05060 677 aa17.12■□□□□ 0.33
SMPD4-215ENST00000457039 NFIAQ12857 509 aa17.12■□□□□ 0.33
SMPD4-215ENST00000457039 TNFAIP1Q13829 316 aa17.12■□□□□ 0.33
SMPD4-215ENST00000457039 RASA3Q14644 834 aa17.12■□□□□ 0.33
SMPD4-215ENST00000457039 UBE3CQ15386 1083 aa17.12■□□□□ 0.33
SMPD4-215ENST00000457039 FAM83AQ86UY5 434 aa17.12■□□□□ 0.33
SMPD4-215ENST00000457039 CDCA5Q96FF9 252 aa17.12■□□□□ 0.33
SMPD4-215ENST00000457039 IDI2Q9BXS1 227 aa17.12■□□□□ 0.33
SMPD4-215ENST00000457039 DDX24Q9GZR7 859 aaKnown RBP eCLIP17.12■□□□□ 0.332e-7■■■■□ 20.2
SMPD4-215ENST00000457039 AATFQ9NY61 560 aaKnown RBP eCLIP17.12■□□□□ 0.33
SMPD4-215ENST00000457039 TMOD2Q9NZR1 351 aa17.12■□□□□ 0.33
SMPD4-215ENST00000457039 PPP2R3BQ9Y5P8 575 aa17.12■□□□□ 0.33
SMPD4-215ENST00000457039 ZNF532Q9HCE3 1301 aa17.12■□□□□ 0.33
SMPD4-215ENST00000457039 TCP10L2B9ZVM9 353 aa17.11■□□□□ 0.33
SMPD4-215ENST00000457039 APLP1P51693 650 aa17.11■□□□□ 0.33
SMPD4-215ENST00000457039 SLFNL1Q499Z3 407 aa17.11■□□□□ 0.33
SMPD4-215ENST00000457039 CST9Q5W186 159 aa17.11■□□□□ 0.33
SMPD4-215ENST00000457039 TEPSINQ96N21 525 aa17.11■□□□□ 0.33
SMPD4-215ENST00000457039 RIOK1Q9BRS2 568 aaKnown RBP17.11■□□□□ 0.33
SMPD4-215ENST00000457039 FAM198AQ9UFP1 575 aa17.11■□□□□ 0.33
SMPD4-215ENST00000457039 MYH7P12883 1935 aa17.1■□□□□ 0.33
SMPD4-215ENST00000457039 BAG3O95817 575 aa17.1■□□□□ 0.33
SMPD4-215ENST00000457039 TNNI2P48788 182 aa17.1■□□□□ 0.33
SMPD4-215ENST00000457039 PRAMEF18Q5VWM3 479 aa17.1■□□□□ 0.33
SMPD4-215ENST00000457039 SH3RF3Q8TEJ3 882 aaPredicted RBP17.1■□□□□ 0.33
SMPD4-215ENST00000457039 EVI5LQ96CN4 794 aa17.1■□□□□ 0.33
SMPD4-215ENST00000457039 DDX4Q9NQI0 724 aaKnown RBP17.1■□□□□ 0.33
SMPD4-215ENST00000457039 RPAP1Q9BWH6 1393 aaPredicted RBP17.1■□□□□ 0.33
SMPD4-215ENST00000457039 TRPM7Q96QT4 1865 aa17.1■□□□□ 0.33
SMPD4-215ENST00000457039 NPM3O75607 178 aaKnown RBP17.09■□□□□ 0.33
SMPD4-215ENST00000457039 PLCG2P16885 1265 aa17.09■□□□□ 0.33
SMPD4-215ENST00000457039 HSPA6P17066 643 aa17.09■□□□□ 0.33
SMPD4-215ENST00000457039 DYNLL1P63167 89 aaKnown RBP17.09■□□□□ 0.33
SMPD4-215ENST00000457039 ZSCAN25Q6NSZ9 544 aa17.09■□□□□ 0.33
SMPD4-215ENST00000457039 CDAN1Q8IWY9 1227 aa17.09■□□□□ 0.33
SMPD4-215ENST00000457039 MIGA1Q8NAN2 632 aa17.09■□□□□ 0.33
SMPD4-215ENST00000457039 NOL10Q9BSC4 688 aaKnown RBP17.09■□□□□ 0.33
SMPD4-215ENST00000457039 TMEM39BQ9GZU3 492 aa17.09■□□□□ 0.33
SMPD4-215ENST00000457039 SSC5DA1L4H1 1573 aa17.09■□□□□ 0.33
SMPD4-215ENST00000457039 RNF113AO15541 343 aaKnown RBP17.08■□□□□ 0.32
SMPD4-215ENST00000457039 ENTPD3O75355 529 aa17.08■□□□□ 0.32
SMPD4-215ENST00000457039 CELF2O95319 508 aaKnown RBP17.08■□□□□ 0.32
SMPD4-215ENST00000457039 ZFYP08048 801 aaPredicted RBP17.08■□□□□ 0.32
SMPD4-215ENST00000457039 RGS3P49796 1198 aa17.08■□□□□ 0.32
SMPD4-215ENST00000457039 TTC22Q5TAA0 569 aa17.08■□□□□ 0.32
SMPD4-215ENST00000457039 CERS3Q8IU89 383 aa17.08■□□□□ 0.32
SMPD4-215ENST00000457039 FAM151AQ8WW52 585 aa17.08■□□□□ 0.32
SMPD4-215ENST00000457039 FSD1Q9BTV5 496 aa17.08■□□□□ 0.32
SMPD4-215ENST00000457039 MAGEB6P1A0A0J9YX57 407 aa17.07■□□□□ 0.32
SMPD4-215ENST00000457039 TMEM88BA6NKF7 163 aa17.07■□□□□ 0.32
SMPD4-215ENST00000457039 GSPT1P15170 499 aaKnown RBP17.07■□□□□ 0.32
SMPD4-215ENST00000457039 NBPF12Q5TAG4 269 aaPredicted RBP17.07■□□□□ 0.32
SMPD4-215ENST00000457039 SKAP1Q86WV1 359 aa17.07■□□□□ 0.32
SMPD4-215ENST00000457039 TICAM2Q86XR7 235 aa17.07■□□□□ 0.32
SMPD4-215ENST00000457039 ZFPM1Q8IX07 1006 aa17.07■□□□□ 0.32
SMPD4-215ENST00000457039 TEX11Q8IYF3 940 aa17.07■□□□□ 0.32
SMPD4-215ENST00000457039 ZNF408Q9H9D4 720 aa17.07■□□□□ 0.32
SMPD4-215ENST00000457039 CDK5RAP2Q96SN8 1893 aa17.06■□□□□ 0.32
SMPD4-215ENST00000457039 FOCADQ5VW36 1801 aa17.06■□□□□ 0.32
SMPD4-215ENST00000457039 TCP10Q12799 353 aa17.06■□□□□ 0.32
SMPD4-215ENST00000457039 LRRFIP1Q32MZ4 808 aaKnown RBP17.06■□□□□ 0.32
SMPD4-215ENST00000457039 APPBP2Q92624 585 aa17.06■□□□□ 0.32
SMPD4-215ENST00000457039 PUS7LQ9H0K6 701 aaKnown RBP17.06■□□□□ 0.32
SMPD4-215ENST00000457039 CREBZFQ9NS37 354 aa17.06■□□□□ 0.32
SMPD4-215ENST00000457039 COL2A1P02458 1487 aaPredicted RBP17.05■□□□□ 0.32
SMPD4-215ENST00000457039 ATRNL1Q5VV63 1379 aa17.05■□□□□ 0.32
SMPD4-215ENST00000457039 FLT1P17948 1338 aa17.05■□□□□ 0.32
SMPD4-215ENST00000457039 TRIM6-TRIM34B2RNG4 842 aa17.05■□□□□ 0.32
SMPD4-215ENST00000457039 PICALMQ13492 652 aa17.05■□□□□ 0.32
SMPD4-215ENST00000457039 SUPT20HL1Q3ZLR7 823 aa17.05■□□□□ 0.32
SMPD4-215ENST00000457039 SH3BP5LQ7L8J4 393 aa17.05■□□□□ 0.32
SMPD4-215ENST00000457039 LCORLQ8N3X6 602 aa17.05■□□□□ 0.32
SMPD4-215ENST00000457039 TGFBRAP1Q8WUH2 860 aa17.05■□□□□ 0.32
Retrieved 100 of 20,778 RNA–protein pairs in 62.3 ms