RNA–Protein interactions for RNA: ENST00000453337.1

HLA-DPA1-244, Transcript of major histocompatibility complex, class II, DP alpha 1, humanhuman

APPRIS ALT2

Gene HLA-DPA1, Length 918 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DPA1-244ENST00000453337 GSG1L2A8MUP6 293 aa14.95□□□□□ -0.02
HLA-DPA1-244ENST00000453337 F8W031 263 aaPredicted RBP14.95□□□□□ -0.02
HLA-DPA1-244ENST00000453337 FZD9O00144 591 aa14.95□□□□□ -0.02
HLA-DPA1-244ENST00000453337 GRIN3BO60391 1043 aa14.95□□□□□ -0.02
HLA-DPA1-244ENST00000453337 FGAP02671 866 aa14.95□□□□□ -0.02
HLA-DPA1-244ENST00000453337 ANP32AP39687 249 aaKnown RBP14.95□□□□□ -0.02
HLA-DPA1-244ENST00000453337 DYNLL1P63167 89 aaKnown RBP14.95□□□□□ -0.02
HLA-DPA1-244ENST00000453337 GPR162Q16538 588 aa14.95□□□□□ -0.02
HLA-DPA1-244ENST00000453337 TSGA10IPQ3SY00 556 aa14.95□□□□□ -0.02
HLA-DPA1-244ENST00000453337 CREB3L3Q68CJ9 461 aa14.95□□□□□ -0.02
HLA-DPA1-244ENST00000453337 KIAA0825Q8IV33 1275 aa14.95□□□□□ -0.02
HLA-DPA1-244ENST00000453337 IFNL3Q8IZI9 196 aa14.95□□□□□ -0.02
HLA-DPA1-244ENST00000453337 LCORLQ8N3X6 602 aa14.95□□□□□ -0.02
HLA-DPA1-244ENST00000453337 OGFOD1Q8N543 542 aa14.95□□□□□ -0.02
HLA-DPA1-244ENST00000453337 IL17RAQ96F46 866 aa14.95□□□□□ -0.02
HLA-DPA1-244ENST00000453337 ATP8A2Q9NTI2 1148 aa14.95□□□□□ -0.02
HLA-DPA1-244ENST00000453337 SERPINA10Q9UK55 444 aa14.95□□□□□ -0.02
HLA-DPA1-244ENST00000453337 SLC27A2O14975 620 aa14.94□□□□□ -0.02
HLA-DPA1-244ENST00000453337 YBX3P16989 372 aaKnown RBP eCLIP14.94□□□□□ -0.02
HLA-DPA1-244ENST00000453337 KRT32Q14532 448 aa14.94□□□□□ -0.02
HLA-DPA1-244ENST00000453337 IMMTQ16891 758 aaKnown RBP14.94□□□□□ -0.02
HLA-DPA1-244ENST00000453337 ZDHHC15Q96MV8 337 aa14.94□□□□□ -0.02
HLA-DPA1-244ENST00000453337 GMLQ99445 158 aa14.94□□□□□ -0.02
HLA-DPA1-244ENST00000453337 NAPBQ9H115 298 aa14.94□□□□□ -0.02
HLA-DPA1-244ENST00000453337 COL4A5P29400 1685 aa14.93□□□□□ -0.02
HLA-DPA1-244ENST00000453337 ZMYM6O95789 1325 aa14.93□□□□□ -0.02
HLA-DPA1-244ENST00000453337 ZNF213O14771 459 aa14.93□□□□□ -0.02
HLA-DPA1-244ENST00000453337 RPS12P25398 132 aaKnown RBP14.93□□□□□ -0.02
HLA-DPA1-244ENST00000453337 BTDP43251 543 aa14.93□□□□□ -0.02
HLA-DPA1-244ENST00000453337 CRKP46108 304 aa14.93□□□□□ -0.02
HLA-DPA1-244ENST00000453337 SCNN1DP51172 638 aa14.93□□□□□ -0.02
HLA-DPA1-244ENST00000453337 PRELPP51888 382 aa14.93□□□□□ -0.02
HLA-DPA1-244ENST00000453337 RABEP1Q15276 862 aa14.93□□□□□ -0.02
HLA-DPA1-244ENST00000453337 DAGLAQ9Y4D2 1042 aa14.93□□□□□ -0.02
HLA-DPA1-244ENST00000453337 SNX14Q9Y5W7 946 aa14.93□□□□□ -0.02
HLA-DPA1-244ENST00000453337 FOXP2O15409 715 aa14.92□□□□□ -0.02
HLA-DPA1-244ENST00000453337 PRKAB2O43741 272 aa14.92□□□□□ -0.02
HLA-DPA1-244ENST00000453337 USP17L8P0C7I0 530 aa14.92□□□□□ -0.02
HLA-DPA1-244ENST00000453337 PSMA5P28066 241 aa14.92□□□□□ -0.02
HLA-DPA1-244ENST00000453337 USP5P45974 858 aa14.92□□□□□ -0.02
HLA-DPA1-244ENST00000453337 TDO2P48775 406 aa14.92□□□□□ -0.02
HLA-DPA1-244ENST00000453337 RBM5P52756 815 aaKnown RBP eCLIP14.92□□□□□ -0.02
HLA-DPA1-244ENST00000453337 KIF2CQ99661 725 aa14.92□□□□□ -0.02
HLA-DPA1-244ENST00000453337 TM6SF1Q9BZW5 370 aa14.92□□□□□ -0.02
HLA-DPA1-244ENST00000453337 TEX11Q8IYF3 940 aa14.91□□□□□ -0.02
HLA-DPA1-244ENST00000453337 RASEFQ8IZ41 740 aa14.91□□□□□ -0.02
HLA-DPA1-244ENST00000453337 SH3RF3Q8TEJ3 882 aaPredicted RBP14.91□□□□□ -0.02
HLA-DPA1-244ENST00000453337 SDR42E1Q8WUS8 393 aa14.91□□□□□ -0.02
HLA-DPA1-244ENST00000453337 DPF2Q92785 391 aa14.91□□□□□ -0.02
HLA-DPA1-244ENST00000453337 USP40Q9NVE5 1235 aa14.91□□□□□ -0.02
HLA-DPA1-244ENST00000453337 PALD1Q9ULE6 856 aa14.91□□□□□ -0.02
HLA-DPA1-244ENST00000453337 ZBTB12Q9Y330 459 aaPredicted RBP14.91□□□□□ -0.02
HLA-DPA1-244ENST00000453337 BAZ2AQ9UIF9 1905 aaKnown RBP14.91□□□□□ -0.02
HLA-DPA1-244ENST00000453337 CYP21A2P08686 494 aa14.9□□□□□ -0.02
HLA-DPA1-244ENST00000453337 RHBDL3P58872 404 aa14.9□□□□□ -0.02
HLA-DPA1-244ENST00000453337 APOBEC3HQ6NTF7 200 aaKnown RBP14.9□□□□□ -0.02
HLA-DPA1-244ENST00000453337 AMOTL1Q8IY63 956 aa14.9□□□□□ -0.02
HLA-DPA1-244ENST00000453337 DCP1AQ9NPI6 582 aaPredicted RBP14.9□□□□□ -0.02
HLA-DPA1-244ENST00000453337 CDK5RAP2Q96SN8 1893 aa14.9□□□□□ -0.02
HLA-DPA1-244ENST00000453337 ECM29Q5VYK3 1845 aa14.89□□□□□ -0.03
HLA-DPA1-244ENST00000453337 HMGB1P09429 215 aaKnown RBP14.89□□□□□ -0.03
HLA-DPA1-244ENST00000453337 DLGAP5Q15398 846 aa14.89□□□□□ -0.03
HLA-DPA1-244ENST00000453337 CFAP100Q494V2 611 aa14.89□□□□□ -0.03
HLA-DPA1-244ENST00000453337 SBK1Q52WX2 424 aa14.89□□□□□ -0.03
HLA-DPA1-244ENST00000453337 CDC42EP5Q6NZY7 148 aa14.89□□□□□ -0.03
HLA-DPA1-244ENST00000453337 MTMR14Q8NCE2 650 aa14.89□□□□□ -0.03
HLA-DPA1-244ENST00000453337 TGFBRAP1Q8WUH2 860 aa14.89□□□□□ -0.03
HLA-DPA1-244ENST00000453337 EPB41L4AQ9HCS5 686 aaPredicted RBP14.89□□□□□ -0.03
HLA-DPA1-244ENST00000453337 RNF181Q9P0P0 153 aa14.89□□□□□ -0.03
HLA-DPA1-244ENST00000453337 GJA3Q9Y6H8 435 aa14.89□□□□□ -0.03
HLA-DPA1-244ENST00000453337 MYH1P12882 1939 aa14.89□□□□□ -0.03
HLA-DPA1-244ENST00000453337 FOCADQ5VW36 1801 aa14.88□□□□□ -0.03
HLA-DPA1-244ENST00000453337 ST18O60284 1047 aa14.88□□□□□ -0.03
HLA-DPA1-244ENST00000453337 SLC3A2P08195 630 aaKnown RBP14.88□□□□□ -0.03
HLA-DPA1-244ENST00000453337 NEK4P51957 841 aa14.88□□□□□ -0.03
HLA-DPA1-244ENST00000453337 C9orf131Q5VYM1 1079 aa14.88□□□□□ -0.03
HLA-DPA1-244ENST00000453337 GPC2Q8N158 579 aa14.88□□□□□ -0.03
HLA-DPA1-244ENST00000453337 JAKMIP1Q96N16 626 aaKnown RBP14.88□□□□□ -0.03
HLA-DPA1-244ENST00000453337 NEK1Q96PY6 1258 aa14.88□□□□□ -0.03
HLA-DPA1-244ENST00000453337 ANAPC4Q9UJX5 808 aa14.88□□□□□ -0.03
HLA-DPA1-244ENST00000453337 CYP46A1Q9Y6A2 500 aa14.88□□□□□ -0.03
HLA-DPA1-244ENST00000453337 MINDY4BA8MYZ0 360 aa14.87□□□□□ -0.03
HLA-DPA1-244ENST00000453337 USP17L12C9JPN9 530 aa14.87□□□□□ -0.03
HLA-DPA1-244ENST00000453337 USP17L21D6R901 530 aa14.87□□□□□ -0.03
HLA-DPA1-244ENST00000453337 E7EWF7 191 aa14.87□□□□□ -0.03
HLA-DPA1-244ENST00000453337 NPM3O75607 178 aaKnown RBP14.87□□□□□ -0.03
HLA-DPA1-244ENST00000453337 ZNF280AP59817 542 aaPredicted RBP14.87□□□□□ -0.03
HLA-DPA1-244ENST00000453337 HAND2P61296 217 aa14.87□□□□□ -0.03
HLA-DPA1-244ENST00000453337 TRDNQ13061 729 aa14.87□□□□□ -0.03
HLA-DPA1-244ENST00000453337 BECN1Q14457 450 aa14.87□□□□□ -0.03
HLA-DPA1-244ENST00000453337 CTR9Q6PD62 1173 aa14.87□□□□□ -0.03
HLA-DPA1-244ENST00000453337 BLOC1S2Q6QNY1 142 aa14.87□□□□□ -0.03
HLA-DPA1-244ENST00000453337 PRMT6Q96LA8 375 aaPredicted RBP14.87□□□□□ -0.03
HLA-DPA1-244ENST00000453337 RNF41Q9H4P4 317 aaPredicted RBP14.87□□□□□ -0.03
HLA-DPA1-244ENST00000453337 ZSWIM6Q9HCJ5 1215 aa14.87□□□□□ -0.03
HLA-DPA1-244ENST00000453337 MCM9Q9NXL9 1143 aa14.87□□□□□ -0.03
HLA-DPA1-244ENST00000453337 ARPP21Q9UBL0 812 aaPredicted RBP14.87□□□□□ -0.03
HLA-DPA1-244ENST00000453337 MKRN1Q9UHC7 482 aaKnown RBP14.87□□□□□ -0.03
HLA-DPA1-244ENST00000453337 CNOT7Q9UIV1 285 aaKnown RBP14.87□□□□□ -0.03
HLA-DPA1-244ENST00000453337 LAMA4Q16363 1823 aa14.87□□□□□ -0.03
Retrieved 100 of 20,778 RNA–protein pairs in 20 ms