RNA–Protein interactions for RNA: ENST00000453285.1

SDC4P-201, Transcript of syndecan 4 pseudogene, humanhuman

BASIC

Gene SDC4P, Length 601 nt, Biotype processed pseudogene, Subcellular localisation Exosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDC4P-201ENST00000453285 PSMA5P28066 241 aa7.15□□□□□ -1.26
SDC4P-201ENST00000453285 AK2P54819 239 aa7.15□□□□□ -1.26
SDC4P-201ENST00000453285 FKBP1AP62942 108 aaKnown RBP7.15□□□□□ -1.26
SDC4P-201ENST00000453285 EXOSC10Q01780 885 aaKnown RBP7.15□□□□□ -1.26
SDC4P-201ENST00000453285 KRT32Q14532 448 aa7.15□□□□□ -1.26
SDC4P-201ENST00000453285 DIXDC1Q155Q3 683 aa7.15□□□□□ -1.26
SDC4P-201ENST00000453285 DALRD3Q5D0E6 543 aaKnown RBP7.15□□□□□ -1.26
SDC4P-201ENST00000453285 DACT2Q5SW24 774 aa7.15□□□□□ -1.26
SDC4P-201ENST00000453285 DZIP1Q86YF9 867 aaKnown RBP7.15□□□□□ -1.26
SDC4P-201ENST00000453285 NKX2-3Q8TAU0 364 aa7.15□□□□□ -1.26
SDC4P-201ENST00000453285 NEK1Q96PY6 1258 aa7.15□□□□□ -1.26
SDC4P-201ENST00000453285 MXD3Q9BW11 206 aa7.15□□□□□ -1.26
SDC4P-201ENST00000453285 VPS33BQ9H267 617 aa7.15□□□□□ -1.26
SDC4P-201ENST00000453285 SPON1Q9HCB6 807 aa7.15□□□□□ -1.26
SDC4P-201ENST00000453285 AATFQ9NY61 560 aaKnown RBP eCLIP7.15□□□□□ -1.26
SDC4P-201ENST00000453285 SLC4A4Q9Y6R1 1079 aa7.15□□□□□ -1.26
SDC4P-201ENST00000453285 MROH7-TTC4A0A0A0MT08 1334 aa7.15□□□□□ -1.26
SDC4P-201ENST00000453285 GAKO14976 1311 aa7.15□□□□□ -1.26
SDC4P-201ENST00000453285 G3V3G9 751 aa7.14□□□□□ -1.27
SDC4P-201ENST00000453285 ZNF213O14771 459 aa7.14□□□□□ -1.27
SDC4P-201ENST00000453285 SIPA1L1O43166 1804 aa7.14□□□□□ -1.27
SDC4P-201ENST00000453285 PPIP5K2O43314 1243 aa7.14□□□□□ -1.27
SDC4P-201ENST00000453285 APPP05067 770 aa7.14□□□□□ -1.27
SDC4P-201ENST00000453285 MCM2P49736 904 aa7.14□□□□□ -1.27
SDC4P-201ENST00000453285 HAND2P61296 217 aa7.14□□□□□ -1.27
SDC4P-201ENST00000453285 GSTO1P78417 241 aa7.14□□□□□ -1.27
SDC4P-201ENST00000453285 CUL4AQ13619 759 aa7.14□□□□□ -1.27
SDC4P-201ENST00000453285 IMMTQ16891 758 aaKnown RBP7.14□□□□□ -1.27
SDC4P-201ENST00000453285 DCAF8Q5TAQ9 597 aa7.14□□□□□ -1.27
SDC4P-201ENST00000453285 SOGA3Q5TF21 947 aa7.14□□□□□ -1.27
SDC4P-201ENST00000453285 STRIP1Q5VSL9 837 aa7.14□□□□□ -1.27
SDC4P-201ENST00000453285 GIMAP6Q6P9H5 292 aa7.14□□□□□ -1.27
SDC4P-201ENST00000453285 BLOC1S2Q6QNY1 142 aa7.14□□□□□ -1.27
SDC4P-201ENST00000453285 NLGN2Q8NFZ4 835 aa7.14□□□□□ -1.27
SDC4P-201ENST00000453285 SDR42E1Q8WUS8 393 aa7.14□□□□□ -1.27
SDC4P-201ENST00000453285 TMX3Q96JJ7 454 aa7.14□□□□□ -1.27
SDC4P-201ENST00000453285 ZNF277Q9NRM2 450 aaPredicted RBP7.14□□□□□ -1.27
SDC4P-201ENST00000453285 PDRG1Q9NUG6 133 aa7.14□□□□□ -1.27
SDC4P-201ENST00000453285 PPP1R1BQ9UD71 204 aaPredicted RBP7.14□□□□□ -1.27
SDC4P-201ENST00000453285 MKRN1Q9UHC7 482 aaKnown RBP7.14□□□□□ -1.27
SDC4P-201ENST00000453285 CYP46A1Q9Y6A2 500 aa7.14□□□□□ -1.27
SDC4P-201ENST00000453285 USP17L3A6NCW0 530 aa7.13□□□□□ -1.27
SDC4P-201ENST00000453285 USP17L4A6NCW7 530 aa7.13□□□□□ -1.27
SDC4P-201ENST00000453285 SMIM22K7EJ46 135 aa7.13□□□□□ -1.27
SDC4P-201ENST00000453285 NFKBIEO00221 500 aa7.13□□□□□ -1.27
SDC4P-201ENST00000453285 DDIT3P35638 169 aa7.13□□□□□ -1.27
SDC4P-201ENST00000453285 IARSP41252 1262 aaKnown RBP7.13□□□□□ -1.27
SDC4P-201ENST00000453285 BTDP43251 543 aa7.13□□□□□ -1.27
SDC4P-201ENST00000453285 PRELPP51888 382 aa7.13□□□□□ -1.27
SDC4P-201ENST00000453285 RHBDL3P58872 404 aa7.13□□□□□ -1.27
SDC4P-201ENST00000453285 TOB2Q14106 344 aaPredicted RBP7.13□□□□□ -1.27
SDC4P-201ENST00000453285 DHX32Q7L7V1 743 aaKnown RBP7.13□□□□□ -1.27
SDC4P-201ENST00000453285 USP17L1Q7RTZ2 530 aa7.13□□□□□ -1.27
SDC4P-201ENST00000453285 TBC1D10CQ8IV04 446 aa7.13□□□□□ -1.27
SDC4P-201ENST00000453285 MB21D2Q8IYB1 491 aaPredicted RBP7.13□□□□□ -1.27
SDC4P-201ENST00000453285 KLHL34Q8N239 644 aa7.13□□□□□ -1.27
SDC4P-201ENST00000453285 SH3RF3Q8TEJ3 882 aaPredicted RBP7.13□□□□□ -1.27
SDC4P-201ENST00000453285 TCEANC2Q96MN5 208 aa7.13□□□□□ -1.27
SDC4P-201ENST00000453285 MRIQ9BWK5 157 aa7.13□□□□□ -1.27
SDC4P-201ENST00000453285 AGXT2Q9BYV1 514 aa7.13□□□□□ -1.27
SDC4P-201ENST00000453285 CRNKL1Q9BZJ0 848 aaKnown RBP7.13□□□□□ -1.27
SDC4P-201ENST00000453285 NAPBQ9H115 298 aa7.13□□□□□ -1.27
SDC4P-201ENST00000453285 DCP1AQ9NPI6 582 aaPredicted RBP7.13□□□□□ -1.27
SDC4P-201ENST00000453285 INCENPQ9NQS7 918 aa7.13□□□□□ -1.27
SDC4P-201ENST00000453285 ATP8A2Q9NTI2 1148 aa7.13□□□□□ -1.27
SDC4P-201ENST00000453285 DAXXQ9UER7 740 aaPredicted RBP7.13□□□□□ -1.27
SDC4P-201ENST00000453285 ANAPC4Q9UJX5 808 aa7.13□□□□□ -1.27
SDC4P-201ENST00000453285 DAGLAQ9Y4D2 1042 aa7.13□□□□□ -1.27
SDC4P-201ENST00000453285 LTBP3Q9NS15 1303 aa7.12□□□□□ -1.27
SDC4P-201ENST00000453285 MYH4Q9Y623 1939 aa7.12□□□□□ -1.27
SDC4P-201ENST00000453285 SLC34A2O95436 690 aa7.12□□□□□ -1.27
SDC4P-201ENST00000453285 LARGE1O95461 756 aa7.12□□□□□ -1.27
SDC4P-201ENST00000453285 BAG3O95817 575 aa7.12□□□□□ -1.27
SDC4P-201ENST00000453285 VIL1P09327 827 aaKnown RBP7.12□□□□□ -1.27
SDC4P-201ENST00000453285 HMGB1P09429 215 aaKnown RBP7.12□□□□□ -1.27
SDC4P-201ENST00000453285 FGRP09769 529 aa7.12□□□□□ -1.27
SDC4P-201ENST00000453285 TDO2P48775 406 aa7.12□□□□□ -1.27
SDC4P-201ENST00000453285 ANTXR2P58335 489 aa7.12□□□□□ -1.27
SDC4P-201ENST00000453285 HDLBPQ00341 1268 aaKnown RBP7.12□□□□□ -1.27
SDC4P-201ENST00000453285 EVX2Q03828 476 aa7.12□□□□□ -1.27
SDC4P-201ENST00000453285 CTDSPL2Q05D32 466 aa7.12□□□□□ -1.27
SDC4P-201ENST00000453285 PPARAQ07869 468 aa7.12□□□□□ -1.27
SDC4P-201ENST00000453285 ST3GAL1Q11201 340 aa7.12□□□□□ -1.27
SDC4P-201ENST00000453285 SBK1Q52WX2 424 aa7.12□□□□□ -1.27
SDC4P-201ENST00000453285 CTR9Q6PD62 1173 aa7.12□□□□□ -1.27
SDC4P-201ENST00000453285 HHIPL2Q6UWX4 724 aa7.12□□□□□ -1.27
SDC4P-201ENST00000453285 Q6ZUG5 572 aa7.12□□□□□ -1.27
SDC4P-201ENST00000453285 CYB5R4Q7L1T6 521 aa7.12□□□□□ -1.27
SDC4P-201ENST00000453285 SLF2Q8IX21 1173 aa7.12□□□□□ -1.27
SDC4P-201ENST00000453285 LARGE2Q8N3Y3 721 aa7.12□□□□□ -1.27
SDC4P-201ENST00000453285 FBXL16Q8N461 479 aa7.12□□□□□ -1.27
SDC4P-201ENST00000453285 SPRYD3Q8NCJ5 442 aa7.12□□□□□ -1.27
SDC4P-201ENST00000453285 NCOA7Q8NI08 942 aa7.12□□□□□ -1.27
SDC4P-201ENST00000453285 STAG1Q8WVM7 1258 aa7.12□□□□□ -1.27
SDC4P-201ENST00000453285 FBXW7Q969H0 707 aa7.12□□□□□ -1.27
SDC4P-201ENST00000453285 GMLQ99445 158 aa7.12□□□□□ -1.27
SDC4P-201ENST00000453285 LARP6Q9BRS8 491 aaKnown RBP7.12□□□□□ -1.27
SDC4P-201ENST00000453285 NACAP1Q9BZK3 213 aa7.12□□□□□ -1.27
SDC4P-201ENST00000453285 TTF2Q9UNY4 1162 aaKnown RBP7.12□□□□□ -1.27
SDC4P-201ENST00000453285 LIMCH1Q9UPQ0 1083 aa7.12□□□□□ -1.27
Retrieved 100 of 20,778 RNA–protein pairs in 20.9 ms