RNA–Protein interactions for RNA: ENST00000452483.1

HMGB3P21-201, Transcript of high mobility group box 3 pseudogene 21, humanhuman

BASIC

Gene HMGB3P21, Length 547 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB3P21-201ENST00000452483 NAGPAQ9UK23 515 aa5.62□□□□□ -1.51
HMGB3P21-201ENST00000452483 STARD13Q9Y3M8 1113 aa5.62□□□□□ -1.51
HMGB3P21-201ENST00000452483 KCNMB2Q9Y691 235 aa5.62□□□□□ -1.51
HMGB3P21-201ENST00000452483 SCINQ9Y6U3 715 aa5.62□□□□□ -1.51
HMGB3P21-201ENST00000452483 PNMA6FA0A0J9YX94 578 aa5.61□□□□□ -1.51
HMGB3P21-201ENST00000452483 KRTAP9-6A0A140TA67 174 aa5.61□□□□□ -1.51
HMGB3P21-201ENST00000452483 CCDC85CA6NKD9 419 aa5.61□□□□□ -1.51
HMGB3P21-201ENST00000452483 MAP3K6O95382 1288 aa5.61□□□□□ -1.51
HMGB3P21-201ENST00000452483 EGFRP00533 1210 aa5.61□□□□□ -1.51
HMGB3P21-201ENST00000452483 FGAP02671 866 aa5.61□□□□□ -1.51
HMGB3P21-201ENST00000452483 NPR3P17342 541 aa5.61□□□□□ -1.51
HMGB3P21-201ENST00000452483 MPSTP25325 297 aa5.61□□□□□ -1.51
HMGB3P21-201ENST00000452483 COL8A1P27658 744 aa5.61□□□□□ -1.51
HMGB3P21-201ENST00000452483 MASP1P48740 699 aa5.61□□□□□ -1.51
HMGB3P21-201ENST00000452483 L1TD1Q5T7N2 865 aaKnown RBP5.61□□□□□ -1.51
HMGB3P21-201ENST00000452483 TTC39BQ5VTQ0 682 aaPredicted RBP5.61□□□□□ -1.51
HMGB3P21-201ENST00000452483 ANKS3Q6ZW76 656 aa5.61□□□□□ -1.51
HMGB3P21-201ENST00000452483 DHX32Q7L7V1 743 aaKnown RBP5.61□□□□□ -1.51
HMGB3P21-201ENST00000452483 ABCF1Q8NE71 845 aaKnown RBP eCLIP5.61□□□□□ -1.51
HMGB3P21-201ENST00000452483 CXorf38Q8TB03 319 aa5.61□□□□□ -1.51
HMGB3P21-201ENST00000452483 DCAF5Q96JK2 942 aa5.61□□□□□ -1.51
HMGB3P21-201ENST00000452483 PSMG3-AS1Q96PY0 264 aa5.61□□□□□ -1.51
HMGB3P21-201ENST00000452483 INO80BQ9C086 356 aaPredicted RBP5.61□□□□□ -1.51
HMGB3P21-201ENST00000452483 SUV39H2Q9H5I1 410 aa5.61□□□□□ -1.51
HMGB3P21-201ENST00000452483 ZNF408Q9H9D4 720 aa5.61□□□□□ -1.51
HMGB3P21-201ENST00000452483 FAM13BQ9NYF5 915 aa5.61□□□□□ -1.51
HMGB3P21-201ENST00000452483 NOP53Q9NZM5 478 aaKnown RBP5.61□□□□□ -1.51
HMGB3P21-201ENST00000452483 NRBP1Q9UHY1 535 aa5.61□□□□□ -1.51
HMGB3P21-201ENST00000452483 ESYT3A0FGR9 886 aa5.6□□□□□ -1.51
HMGB3P21-201ENST00000452483 TSPAN6O43657 245 aa5.6□□□□□ -1.51
HMGB3P21-201ENST00000452483 SASH3O75995 380 aa5.6□□□□□ -1.51
HMGB3P21-201ENST00000452483 BPNT1O95861 308 aa5.6□□□□□ -1.51
HMGB3P21-201ENST00000452483 TARSP26639 723 aaKnown RBP5.6□□□□□ -1.51
HMGB3P21-201ENST00000452483 CNGA1P29973 690 aa5.6□□□□□ -1.51
HMGB3P21-201ENST00000452483 CNGB1Q14028 1251 aaPredicted RBP5.6□□□□□ -1.51
HMGB3P21-201ENST00000452483 BRDTQ58F21 947 aaPredicted RBP5.6□□□□□ -1.51
HMGB3P21-201ENST00000452483 ALYREFQ86V81 257 aaKnown RBP5.6□□□□□ -1.51
HMGB3P21-201ENST00000452483 TRIM11Q96F44 468 aa5.6□□□□□ -1.51
HMGB3P21-201ENST00000452483 KANSL2Q9H9L4 492 aa5.6□□□□□ -1.51
HMGB3P21-201ENST00000452483 ARNT2Q9HBZ2 717 aa5.6□□□□□ -1.51
HMGB3P21-201ENST00000452483 PRDM6Q9NQX0 595 aa5.6□□□□□ -1.51
HMGB3P21-201ENST00000452483 FAM221BA6H8Z2 402 aa5.59□□□□□ -1.51
HMGB3P21-201ENST00000452483 ZBTB39O15060 712 aa5.59□□□□□ -1.51
HMGB3P21-201ENST00000452483 GPR182O15218 404 aa5.59□□□□□ -1.51
HMGB3P21-201ENST00000452483 CTSHP09668 335 aa5.59□□□□□ -1.51
HMGB3P21-201ENST00000452483 MZF1P28698 734 aaPredicted RBP5.59□□□□□ -1.51
HMGB3P21-201ENST00000452483 POU5F1Q01860 360 aaKnown RBP5.59□□□□□ -1.51
HMGB3P21-201ENST00000452483 PTPN12Q05209 780 aaKnown RBP5.59□□□□□ -1.51
HMGB3P21-201ENST00000452483 RAPGEF1Q13905 1077 aa5.59□□□□□ -1.51
HMGB3P21-201ENST00000452483 RASA3Q14644 834 aa5.59□□□□□ -1.51
HMGB3P21-201ENST00000452483 PCSK7Q16549 785 aa5.59□□□□□ -1.51
HMGB3P21-201ENST00000452483 C8orf86Q6ZUL3 223 aa5.59□□□□□ -1.51
HMGB3P21-201ENST00000452483 KIAA0907Q7Z7F0 614 aaPredicted RBP5.59□□□□□ -1.51
HMGB3P21-201ENST00000452483 MICALL1Q8N3F8 863 aa5.59□□□□□ -1.51
HMGB3P21-201ENST00000452483 C1orf131Q8NDD1 294 aaKnown RBP5.59□□□□□ -1.51
HMGB3P21-201ENST00000452483 GPR152Q8TDT2 470 aa5.59□□□□□ -1.51
HMGB3P21-201ENST00000452483 JPH1Q9HDC5 661 aaPredicted RBP5.59□□□□□ -1.51
HMGB3P21-201ENST00000452483 CASS4Q9NQ75 786 aa5.59□□□□□ -1.51
HMGB3P21-201ENST00000452483 CCDC87Q9NVE4 849 aa5.59□□□□□ -1.51
HMGB3P21-201ENST00000452483 TPX2Q9ULW0 747 aaKnown RBP5.59□□□□□ -1.51
HMGB3P21-201ENST00000452483 R3HCC1Q9Y3T6 440 aaKnown RBP5.59□□□□□ -1.51
HMGB3P21-201ENST00000452483 AK5Q9Y6K8 562 aa5.59□□□□□ -1.51
HMGB3P21-201ENST00000452483 UBAP1LF5GYI3 381 aa5.58□□□□□ -1.52
HMGB3P21-201ENST00000452483 ATF3P18847 181 aa5.58□□□□□ -1.52
HMGB3P21-201ENST00000452483 NRLP54845 237 aa5.58□□□□□ -1.52
HMGB3P21-201ENST00000452483 GPLD1P80108 840 aa5.58□□□□□ -1.52
HMGB3P21-201ENST00000452483 MLLT1Q03111 559 aaPredicted RBP5.58□□□□□ -1.52
HMGB3P21-201ENST00000452483 MAPRE1Q15691 268 aaKnown RBP5.58□□□□□ -1.52
HMGB3P21-201ENST00000452483 PLA2G4EQ3MJ16 856 aa5.58□□□□□ -1.52
HMGB3P21-201ENST00000452483 C10orf62Q5T681 223 aaPredicted RBP5.58□□□□□ -1.52
HMGB3P21-201ENST00000452483 EFCAB2Q5VUJ9 269 aa5.58□□□□□ -1.52
HMGB3P21-201ENST00000452483 PSAPL1Q6NUJ1 521 aa5.58□□□□□ -1.52
HMGB3P21-201ENST00000452483 CCDC174Q6PII3 467 aa5.58□□□□□ -1.52
HMGB3P21-201ENST00000452483 C20orf204Q6ZNR8 217 aa5.58□□□□□ -1.52
HMGB3P21-201ENST00000452483 FAM35AQ86V20 835 aa5.58□□□□□ -1.52
HMGB3P21-201ENST00000452483 ATCAYQ86WG3 371 aa5.58□□□□□ -1.52
HMGB3P21-201ENST00000452483 SDR16C5Q8N3Y7 309 aa5.58□□□□□ -1.52
HMGB3P21-201ENST00000452483 TRPM4Q8TD43 1214 aa5.58□□□□□ -1.52
HMGB3P21-201ENST00000452483 NIF3L1Q9GZT8 377 aa5.58□□□□□ -1.52
HMGB3P21-201ENST00000452483 CNTN3Q9P232 1028 aa5.58□□□□□ -1.52
HMGB3P21-201ENST00000452483 TCERG1O14776 1098 aaKnown RBP5.57□□□□□ -1.52
HMGB3P21-201ENST00000452483 MMP20O60882 483 aa5.57□□□□□ -1.52
HMGB3P21-201ENST00000452483 LILRB5O75023 590 aa5.57□□□□□ -1.52
HMGB3P21-201ENST00000452483 ALDH1L1O75891 902 aa5.57□□□□□ -1.52
HMGB3P21-201ENST00000452483 NID1P14543 1247 aa5.57□□□□□ -1.52
HMGB3P21-201ENST00000452483 CPB1P15086 417 aa5.57□□□□□ -1.52
HMGB3P21-201ENST00000452483 CDC27P30260 824 aa5.57□□□□□ -1.52
HMGB3P21-201ENST00000452483 SOX18P35713 384 aa5.57□□□□□ -1.52
HMGB3P21-201ENST00000452483 CDKN1CP49918 316 aaPredicted RBP5.57□□□□□ -1.52
HMGB3P21-201ENST00000452483 EPHB1P54762 984 aa5.57□□□□□ -1.52
HMGB3P21-201ENST00000452483 COL9A3Q14050 684 aaPredicted RBP5.57□□□□□ -1.52
HMGB3P21-201ENST00000452483 RAB33AQ14088 237 aa5.57□□□□□ -1.52
HMGB3P21-201ENST00000452483 NFE2Q16621 373 aaPredicted RBP5.57□□□□□ -1.52
HMGB3P21-201ENST00000452483 ICE2Q659A1 982 aa5.57□□□□□ -1.52
HMGB3P21-201ENST00000452483 ALKBH2Q6NS38 261 aa5.57□□□□□ -1.52
HMGB3P21-201ENST00000452483 C16orf86Q6ZW13 317 aa5.57□□□□□ -1.52
HMGB3P21-201ENST00000452483 LRP10Q7Z4F1 713 aa5.57□□□□□ -1.52
HMGB3P21-201ENST00000452483 NLRP13Q86W25 1043 aa5.57□□□□□ -1.52
HMGB3P21-201ENST00000452483 NUDT8Q8WV74 236 aa5.57□□□□□ -1.52
HMGB3P21-201ENST00000452483 ALKBH8Q96BT7 664 aaKnown RBP5.57□□□□□ -1.52
Retrieved 100 of 20,778 RNA–protein pairs in 18.1 ms