RNA–Protein interactions for RNA: ENST00000450066.6

USP39-207, Transcript of ubiquitin specific peptidase 39, humanhuman

TSL 2 BASIC

Gene USP39, Length 2,086 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP39-207ENST00000450066 LDHCP07864 332 aa16.84■□□□□ 0.29
USP39-207ENST00000450066 GRIK5Q16478 980 aa16.84■□□□□ 0.29
USP39-207ENST00000450066 MFSD14BQ5SR56 506 aa16.84■□□□□ 0.29
USP39-207ENST00000450066 AKNAD1Q5T1N1 836 aa16.84■□□□□ 0.29
USP39-207ENST00000450066 CHST3Q7LGC8 479 aa16.84■□□□□ 0.29
USP39-207ENST00000450066 RTFDC1Q9BY42 306 aaPredicted RBP16.84■□□□□ 0.29
USP39-207ENST00000450066 CNNM2Q9H8M5 875 aa16.84■□□□□ 0.29
USP39-207ENST00000450066 ANAPC4Q9UJX5 808 aa16.84■□□□□ 0.29
USP39-207ENST00000450066 EVCP57679 992 aa16.84■□□□□ 0.29
USP39-207ENST00000450066 CLEC17AQ6ZS10 378 aa16.84■□□□□ 0.29
USP39-207ENST00000450066 STAG1Q8WVM7 1258 aa16.84■□□□□ 0.29
USP39-207ENST00000450066 ATP8A2Q9NTI2 1148 aa16.84■□□□□ 0.29
USP39-207ENST00000450066 ANTXR2P58335 489 aa16.83■□□□□ 0.28
USP39-207ENST00000450066 CTDSPL2Q05D32 466 aa16.83■□□□□ 0.28
USP39-207ENST00000450066 PPARAQ07869 468 aa16.83■□□□□ 0.28
USP39-207ENST00000450066 ILDR1Q86SU0 546 aaPredicted RBP16.83■□□□□ 0.28
USP39-207ENST00000450066 CERS3Q8IU89 383 aa16.83■□□□□ 0.28
USP39-207ENST00000450066 GTF3C6Q969F1 213 aa16.83■□□□□ 0.28
USP39-207ENST00000450066 ZNF274Q96GC6 653 aaPredicted RBP16.83■□□□□ 0.28
USP39-207ENST00000450066 GBP4Q96PP9 640 aa16.83■□□□□ 0.28
USP39-207ENST00000450066 SUGT1Q9Y2Z0 365 aa16.83■□□□□ 0.28
USP39-207ENST00000450066 ZDHHC9Q9Y397 364 aa16.83■□□□□ 0.28
USP39-207ENST00000450066 BAG3O95817 575 aa16.82■□□□□ 0.28
USP39-207ENST00000450066 MCM4P33991 863 aa16.82■□□□□ 0.28
USP39-207ENST00000450066 PPP4CP60510 307 aa16.82■□□□□ 0.28
USP39-207ENST00000450066 GTF2IP78347 998 aa16.82■□□□□ 0.28
USP39-207ENST00000450066 DIXDC1Q155Q3 683 aa16.82■□□□□ 0.28
USP39-207ENST00000450066 MFSD6Q6ZSS7 791 aa16.82■□□□□ 0.28
USP39-207ENST00000450066 KRT23Q9C075 422 aa16.82■□□□□ 0.28
USP39-207ENST00000450066 RNF41Q9H4P4 317 aaPredicted RBP16.82■□□□□ 0.28
USP39-207ENST00000450066 MROH7-TTC4A0A0A0MT08 1334 aa16.82■□□□□ 0.28
USP39-207ENST00000450066 NEDD4P46934 1319 aa16.82■□□□□ 0.28
USP39-207ENST00000450066 DLEC1Q9Y238 1755 aa16.82■□□□□ 0.28
USP39-207ENST00000450066 PFKFB2O60825 505 aa16.82■□□□□ 0.28
USP39-207ENST00000450066 BRD1O95696 1058 aa16.82■□□□□ 0.28
USP39-207ENST00000450066 APOBRQ0VD83 1088 aa16.82■□□□□ 0.28
USP39-207ENST00000450066 STK3Q13188 491 aa16.82■□□□□ 0.28
USP39-207ENST00000450066 GRIPAP1Q4V328 841 aa16.82■□□□□ 0.28
USP39-207ENST00000450066 SLF2Q8IX21 1173 aa16.82■□□□□ 0.28
USP39-207ENST00000450066 SNED1Q8TER0 1413 aa16.82■□□□□ 0.28
USP39-207ENST00000450066 FAM163AQ96GL9 167 aaPredicted RBP16.82■□□□□ 0.28
USP39-207ENST00000450066 GOLGB1Q14789 3259 aaKnown RBP16.81■□□□□ 0.28
USP39-207ENST00000450066 G3V3G9 751 aa16.81■□□□□ 0.28
USP39-207ENST00000450066 DOK7Q18PE1 504 aa16.81■□□□□ 0.28
USP39-207ENST00000450066 DCAF8Q5TAQ9 597 aa16.81■□□□□ 0.28
USP39-207ENST00000450066 PODNQ7Z5L7 613 aa16.81■□□□□ 0.28
USP39-207ENST00000450066 TTLL6Q8N841 843 aa16.81■□□□□ 0.28
USP39-207ENST00000450066 NOL10Q9BSC4 688 aaKnown RBP16.81■□□□□ 0.28
USP39-207ENST00000450066 DCP1AQ9NPI6 582 aaPredicted RBP16.81■□□□□ 0.28
USP39-207ENST00000450066 B4E1Z4 1266 aa16.81■□□□□ 0.28
USP39-207ENST00000450066 GJB2P29033 226 aa16.81■□□□□ 0.28
USP39-207ENST00000450066 CYB5R4Q7L1T6 521 aa16.81■□□□□ 0.28
USP39-207ENST00000450066 MTFR1LQ9H019 292 aa16.81■□□□□ 0.28
USP39-207ENST00000450066 ZNF219Q9P2Y4 722 aaPredicted RBP16.81■□□□□ 0.28
USP39-207ENST00000450066 TACC3Q9Y6A5 838 aa16.81■□□□□ 0.28
USP39-207ENST00000450066 CHD4Q14839 1912 aa16.8■□□□□ 0.28
USP39-207ENST00000450066 MINDY4BA8MYZ0 360 aa16.8■□□□□ 0.28
USP39-207ENST00000450066 ZBTB7AO95365 584 aa16.8■□□□□ 0.28
USP39-207ENST00000450066 PDIA3P30101 505 aaKnown RBP16.8■□□□□ 0.28
USP39-207ENST00000450066 CTR9Q6PD62 1173 aa16.8■□□□□ 0.28
USP39-207ENST00000450066 CHMP4CQ96CF2 233 aa16.8■□□□□ 0.28
USP39-207ENST00000450066 TMEM87BQ96K49 555 aa16.8■□□□□ 0.28
USP39-207ENST00000450066 INCENPQ9NQS7 918 aa16.8■□□□□ 0.28
USP39-207ENST00000450066 KIF13BQ9NQT8 1826 aa16.8■□□□□ 0.28
USP39-207ENST00000450066 GPR75-ASB3A0A0A6YYF3 556 aa16.79■□□□□ 0.28
USP39-207ENST00000450066 PCP11498 1178 aaKnown RBP16.79■□□□□ 0.28
USP39-207ENST00000450066 PDIA4P13667 645 aaKnown RBP16.79■□□□□ 0.28
USP39-207ENST00000450066 KCNA3P22001 575 aa16.79■□□□□ 0.28
USP39-207ENST00000450066 SCRN1Q12765 414 aa16.79■□□□□ 0.28
USP39-207ENST00000450066 SUPT20HQ8NEM7 779 aa16.79■□□□□ 0.28
USP39-207ENST00000450066 LLPHQ9BRT6 129 aaKnown RBP16.79■□□□□ 0.28
USP39-207ENST00000450066 GPHNQ9NQX3 736 aaPredicted RBP16.79■□□□□ 0.28
USP39-207ENST00000450066 ANGEL1Q9UNK9 670 aaKnown RBP16.79■□□□□ 0.28
USP39-207ENST00000450066 WDR33Q9C0J8 1336 aaKnown RBP16.79■□□□□ 0.28
USP39-207ENST00000450066 USP17L12C9JPN9 530 aa16.79■□□□□ 0.28
USP39-207ENST00000450066 USP17L21D6R901 530 aa16.79■□□□□ 0.28
USP39-207ENST00000450066 DPEP1P16444 411 aa16.79■□□□□ 0.28
USP39-207ENST00000450066 SYT1P21579 422 aa16.79■□□□□ 0.28
USP39-207ENST00000450066 SBK1Q52WX2 424 aa16.79■□□□□ 0.28
USP39-207ENST00000450066 NKX2-3Q8TAU0 364 aa16.79■□□□□ 0.28
USP39-207ENST00000450066 SH3RF3Q8TEJ3 882 aaPredicted RBP16.79■□□□□ 0.28
USP39-207ENST00000450066 ZSWIM5Q9P217 1185 aa16.79■□□□□ 0.28
USP39-207ENST00000450066 ARPP21Q9UBL0 812 aaPredicted RBP16.79■□□□□ 0.28
USP39-207ENST00000450066 GAKO14976 1311 aa16.79■□□□□ 0.28
USP39-207ENST00000450066 MYH2Q9UKX2 1941 aa16.78■□□□□ 0.28
USP39-207ENST00000450066 SH2B2O14492 632 aaPredicted RBP16.78■□□□□ 0.28
USP39-207ENST00000450066 C21orf2O43822 256 aa16.78■□□□□ 0.28
USP39-207ENST00000450066 KDM4AO75164 1064 aa16.78■□□□□ 0.28
USP39-207ENST00000450066 POLD1P28340 1107 aa16.78■□□□□ 0.28
USP39-207ENST00000450066 MTA3Q9BTC8 594 aa16.78■□□□□ 0.28
USP39-207ENST00000450066 MKRN1Q9UHC7 482 aaKnown RBP16.78■□□□□ 0.28
USP39-207ENST00000450066 DDX11L8A8MPP1 907 aa16.77■□□□□ 0.28
USP39-207ENST00000450066 STX6O43752 255 aa16.77■□□□□ 0.28
USP39-207ENST00000450066 BAG4O95429 457 aaKnown RBP16.77■□□□□ 0.28
USP39-207ENST00000450066 FGRP09769 529 aa16.77■□□□□ 0.28
USP39-207ENST00000450066 PLCG2P16885 1265 aa16.77■□□□□ 0.28
USP39-207ENST00000450066 BTDP43251 543 aa16.77■□□□□ 0.28
USP39-207ENST00000450066 TGFB2P61812 414 aa16.77■□□□□ 0.28
USP39-207ENST00000450066 KIAA2012Q0VF49 1180 aa16.77■□□□□ 0.28
USP39-207ENST00000450066 CERS5Q8N5B7 392 aa16.77■□□□□ 0.28
Retrieved 100 of 20,778 RNA–protein pairs in 17.8 ms