RNA–Protein interactions for RNA: ENST00000449082.2

SCN10A-201, Transcript of sodium voltage-gated channel alpha subunit 10, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SCN10A, Length 6,418 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCN10A-201ENST00000449082 PKD2L1Q9P0L9 805 aa11.5□□□□□ -0.57
SCN10A-201ENST00000449082 TMEM2Q9UHN6 1383 aa11.5□□□□□ -0.57
SCN10A-201ENST00000449082 VWA3AA6NCI4 1184 aa11.5□□□□□ -0.57
SCN10A-201ENST00000449082 GPAA1O43292 621 aa11.5□□□□□ -0.57
SCN10A-201ENST00000449082 TAF5LO75529 589 aa11.5□□□□□ -0.57
SCN10A-201ENST00000449082 AKNAD1Q5T1N1 836 aa11.5□□□□□ -0.57
SCN10A-201ENST00000449082 HAUS3Q68CZ6 603 aa11.5□□□□□ -0.57
SCN10A-201ENST00000449082 FCHSD1Q86WN1 690 aa11.5□□□□□ -0.57
SCN10A-201ENST00000449082 USP26Q9BXU7 913 aa11.5□□□□□ -0.57
SCN10A-201ENST00000449082 CTAGE15A4D2H0 777 aa11.49□□□□□ -0.57
SCN10A-201ENST00000449082 KRT86O43790 486 aa11.49□□□□□ -0.57
SCN10A-201ENST00000449082 ZBED4O75132 1171 aa11.49□□□□□ -0.57
SCN10A-201ENST00000449082 CTAGE8P0CG41 777 aa11.49□□□□□ -0.57
SCN10A-201ENST00000449082 CTAGE6Q86UF2 777 aa11.49□□□□□ -0.57
SCN10A-201ENST00000449082 CTAGE4Q8IX94 777 aa11.49□□□□□ -0.57
SCN10A-201ENST00000449082 PLIN2Q99541 437 aa11.49□□□□□ -0.57
SCN10A-201ENST00000449082 PBRM1Q86U86 1689 aa11.49□□□□□ -0.57
SCN10A-201ENST00000449082 GJC1P36383 396 aa11.49□□□□□ -0.57
SCN10A-201ENST00000449082 CCDC129Q6ZRS4 1044 aa11.49□□□□□ -0.57
SCN10A-201ENST00000449082 ZSWIM4Q9H7M6 989 aa11.49□□□□□ -0.57
SCN10A-201ENST00000449082 GPHNQ9NQX3 736 aaPredicted RBP11.49□□□□□ -0.57
SCN10A-201ENST00000449082 NOD1Q9Y239 953 aa11.49□□□□□ -0.57
SCN10A-201ENST00000449082 A0A1W2PRG0 241 aa11.49□□□□□ -0.57
SCN10A-201ENST00000449082 ATP2A1O14983 1001 aa11.49□□□□□ -0.57
SCN10A-201ENST00000449082 MRPS9P82933 396 aaKnown RBP11.49□□□□□ -0.57
SCN10A-201ENST00000449082 GCKRQ14397 625 aa11.49□□□□□ -0.57
SCN10A-201ENST00000449082 SPECC1LQ69YQ0 1117 aa11.49□□□□□ -0.57
SCN10A-201ENST00000449082 GSTA5Q7RTV2 222 aa11.49□□□□□ -0.57
SCN10A-201ENST00000449082 FLAD1Q8NFF5 587 aa11.49□□□□□ -0.57
SCN10A-201ENST00000449082 CCDC77Q9BR77 488 aa11.49□□□□□ -0.57
SCN10A-201ENST00000449082 USP19O94966 1318 aa11.49□□□□□ -0.57
SCN10A-201ENST00000449082 ELP1O95163 1332 aa11.49□□□□□ -0.57
SCN10A-201ENST00000449082 TMEM110-MUSTN1A8MSY1 372 aa11.49□□□□□ -0.57
SCN10A-201ENST00000449082 SPATA5Q8NB90 893 aa11.49□□□□□ -0.57
SCN10A-201ENST00000449082 SUCLG2Q96I99 432 aa11.49□□□□□ -0.57
SCN10A-201ENST00000449082 ZFYVE16Q7Z3T8 1539 aa11.49□□□□□ -0.57
SCN10A-201ENST00000449082 SLC27A2O14975 620 aa11.49□□□□□ -0.57
SCN10A-201ENST00000449082 EPB41P11171 864 aaKnown RBP11.49□□□□□ -0.57
SCN10A-201ENST00000449082 STX17P56962 302 aa11.49□□□□□ -0.57
SCN10A-201ENST00000449082 TYRO3Q06418 890 aa11.49□□□□□ -0.57
SCN10A-201ENST00000449082 FNBP1Q96RU3 617 aa11.49□□□□□ -0.57
SCN10A-201ENST00000449082 ANGEL1Q9UNK9 670 aaKnown RBP11.49□□□□□ -0.57
SCN10A-201ENST00000449082 DDX17Q92841 729 aaKnown RBP11.48□□□□□ -0.57
SCN10A-201ENST00000449082 IQCGQ9H095 443 aaKnown RBP11.48□□□□□ -0.57
SCN10A-201ENST00000449082 PLEKHG3A1L390 1219 aa11.48□□□□□ -0.57
SCN10A-201ENST00000449082 POLR3GO15318 223 aaPredicted RBP11.48□□□□□ -0.57
SCN10A-201ENST00000449082 WDR44Q5JSH3 913 aa11.48□□□□□ -0.57
SCN10A-201ENST00000449082 RNF187Q5TA31 235 aaPredicted RBP11.48□□□□□ -0.57
SCN10A-201ENST00000449082 IFT74Q96LB3 600 aa11.48□□□□□ -0.57
SCN10A-201ENST00000449082 LZTS2Q9BRK4 669 aa11.48□□□□□ -0.57
SCN10A-201ENST00000449082 CCDC50Q8IVM0 306 aa11.48□□□□□ -0.57
SCN10A-201ENST00000449082 OTUD6BQ8N6M0 293 aa11.48□□□□□ -0.57
SCN10A-201ENST00000449082 LLPHQ9BRT6 129 aaKnown RBP11.48□□□□□ -0.57
SCN10A-201ENST00000449082 PZPP20742 1482 aa11.48□□□□□ -0.57
SCN10A-201ENST00000449082 TUBB4AP04350 444 aa11.48□□□□□ -0.57
SCN10A-201ENST00000449082 KLHDC4Q8TBB5 520 aa11.48□□□□□ -0.57
SCN10A-201ENST00000449082 CCNT1O60563 726 aaKnown RBP11.48□□□□□ -0.57
SCN10A-201ENST00000449082 PPP2R5BQ15173 497 aa11.48□□□□□ -0.57
SCN10A-201ENST00000449082 CCDC186Q7Z3E2 898 aa11.48□□□□□ -0.57
SCN10A-201ENST00000449082 CCDC117Q8IWD4 279 aaPredicted RBP11.48□□□□□ -0.57
SCN10A-201ENST00000449082 NEO1Q92859 1461 aa11.48□□□□□ -0.57
SCN10A-201ENST00000449082 IBTKQ9P2D0 1353 aaPredicted RBP11.47□□□□□ -0.57
SCN10A-201ENST00000449082 NOP56O00567 594 aaKnown RBP11.47□□□□□ -0.57
SCN10A-201ENST00000449082 SLC1A4P43007 532 aa11.47□□□□□ -0.57
SCN10A-201ENST00000449082 DCAF17Q5H9S7 520 aaPredicted RBP11.47□□□□□ -0.57
SCN10A-201ENST00000449082 KBTBD3Q8NAB2 608 aa11.47□□□□□ -0.57
SCN10A-201ENST00000449082 CTAGE9A4FU28 777 aa11.47□□□□□ -0.57
SCN10A-201ENST00000449082 DLGAP5Q15398 846 aa11.47□□□□□ -0.57
SCN10A-201ENST00000449082 ZYXQ15942 572 aaKnown RBP11.47□□□□□ -0.57
SCN10A-201ENST00000449082 CHMP2AO43633 222 aa11.47□□□□□ -0.57
SCN10A-201ENST00000449082 PLXNC1O60486 1568 aa11.47□□□□□ -0.57
SCN10A-201ENST00000449082 PLCB3Q01970 1234 aa11.47□□□□□ -0.57
SCN10A-201ENST00000449082 C8orf34Q49A92 452 aa11.47□□□□□ -0.57
SCN10A-201ENST00000449082 PPM1EQ8WY54 764 aa11.47□□□□□ -0.57
SCN10A-201ENST00000449082 ZNF496Q96IT1 587 aaPredicted RBP11.47□□□□□ -0.57
SCN10A-201ENST00000449082 FAM107BQ9H098 131 aa11.47□□□□□ -0.57
SCN10A-201ENST00000449082 EXOC7Q9UPT5 735 aa11.47□□□□□ -0.57
SCN10A-201ENST00000449082 V9GY48 417 aaPredicted RBP11.47□□□□□ -0.57
SCN10A-201ENST00000449082 EIF4A1P60842 406 aaKnown RBP11.47□□□□□ -0.57
SCN10A-201ENST00000449082 PIK3AP1Q6ZUJ8 805 aa11.47□□□□□ -0.57
SCN10A-201ENST00000449082 CCDC169A6NNP5 214 aa11.47□□□□□ -0.57
SCN10A-201ENST00000449082 ADGRL2O95490 1459 aa11.47□□□□□ -0.57
SCN10A-201ENST00000449082 CFAP74Q9C0B2 1584 aa11.47□□□□□ -0.57
SCN10A-201ENST00000449082 PER1O15534 1290 aaPredicted RBP11.46□□□□□ -0.57
SCN10A-201ENST00000449082 STRN3Q13033 797 aa11.46□□□□□ -0.57
SCN10A-201ENST00000449082 TCIRG1Q13488 830 aa11.46□□□□□ -0.57
SCN10A-201ENST00000449082 BIRC3Q13489 604 aa11.46□□□□□ -0.57
SCN10A-201ENST00000449082 CNNM4Q6P4Q7 775 aa11.46□□□□□ -0.57
SCN10A-201ENST00000449082 DNAI1Q9UI46 699 aa11.46□□□□□ -0.57
SCN10A-201ENST00000449082 TRAF5O00463 557 aa11.46□□□□□ -0.57
SCN10A-201ENST00000449082 PPIP5K2O43314 1243 aa11.46□□□□□ -0.57
SCN10A-201ENST00000449082 RRP9O43818 475 aaKnown RBP11.46□□□□□ -0.57
SCN10A-201ENST00000449082 MYCLP12524 364 aaPredicted RBP11.46□□□□□ -0.57
SCN10A-201ENST00000449082 TRAF3IP1Q8TDR0 691 aaPredicted RBP11.46□□□□□ -0.57
SCN10A-201ENST00000449082 KIFAP3Q92845 792 aa11.46□□□□□ -0.57
SCN10A-201ENST00000449082 DISP1Q96F81 1524 aa11.46□□□□□ -0.57
SCN10A-201ENST00000449082 H7C1D1 291 aa11.46□□□□□ -0.57
SCN10A-201ENST00000449082 ADCY7P51828 1080 aa11.46□□□□□ -0.57
SCN10A-201ENST00000449082 BMS1Q14692 1282 aaKnown RBP11.46□□□□□ -0.57
SCN10A-201ENST00000449082 LUC7L2Q9Y383 392 aaKnown RBP11.46□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 29 ms