RNA–Protein interactions for RNA: ENST00000447734.5

PMS1-216, Transcript of PMS1 homolog 1, mismatch repair system component, humanhuman

TSL 5

Gene PMS1, Length 570 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PMS1-216ENST00000447734 GRIP2Q9C0E4 1043 aa5.1□□□□□ -1.59
PMS1-216ENST00000447734 DDAH1O94760 285 aa5.09□□□□□ -1.59
PMS1-216ENST00000447734 F13A1P00488 732 aa5.09□□□□□ -1.59
PMS1-216ENST00000447734 CYP2E1P05181 493 aaPredicted RBP5.09□□□□□ -1.59
PMS1-216ENST00000447734 IMPDH2P12268 514 aa5.09□□□□□ -1.59
PMS1-216ENST00000447734 GRNP28799 593 aaKnown RBP5.09□□□□□ -1.59
PMS1-216ENST00000447734 BAG6P46379 1132 aa5.09□□□□□ -1.59
PMS1-216ENST00000447734 RPS26P62854 115 aaKnown RBP5.09□□□□□ -1.59
PMS1-216ENST00000447734 SNRPNP63162 240 aaKnown RBP5.09□□□□□ -1.59
PMS1-216ENST00000447734 TYRO3Q06418 890 aa5.09□□□□□ -1.59
PMS1-216ENST00000447734 MPP2Q14168 576 aa5.09□□□□□ -1.59
PMS1-216ENST00000447734 PPP2R5EQ16537 467 aa5.09□□□□□ -1.59
PMS1-216ENST00000447734 C21orf62-AS1Q17RA5 79 aa5.09□□□□□ -1.59
PMS1-216ENST00000447734 ARSJQ5FYB0 599 aaPredicted RBP5.09□□□□□ -1.59
PMS1-216ENST00000447734 CT47A1Q5JQC4 288 aaPredicted RBP5.09□□□□□ -1.59
PMS1-216ENST00000447734 DIEXFQ68CQ4 756 aaKnown RBP5.09□□□□□ -1.59
PMS1-216ENST00000447734 CCSAPQ6IQ19 270 aaPredicted RBP5.09□□□□□ -1.59
PMS1-216ENST00000447734 BNC2Q6ZN30 1099 aaPredicted RBP5.09□□□□□ -1.59
PMS1-216ENST00000447734 LYSMD3Q7Z3D4 306 aa5.09□□□□□ -1.59
PMS1-216ENST00000447734 TRIM22Q8IYM9 498 aa5.09□□□□□ -1.59
PMS1-216ENST00000447734 BEND7Q8N7W2 519 aaPredicted RBP5.09□□□□□ -1.59
PMS1-216ENST00000447734 FBXO27Q8NI29 283 aa5.09□□□□□ -1.59
PMS1-216ENST00000447734 UBE2Q2Q8WVN8 375 aa5.09□□□□□ -1.59
PMS1-216ENST00000447734 RELTQ969Z4 430 aa5.09□□□□□ -1.59
PMS1-216ENST00000447734 MFSD3Q96ES6 412 aa5.09□□□□□ -1.59
PMS1-216ENST00000447734 CEP63Q96MT8 703 aa5.09□□□□□ -1.59
PMS1-216ENST00000447734 TNKS2Q9H2K2 1166 aa5.09□□□□□ -1.59
PMS1-216ENST00000447734 ENAMQ9NRM1 1142 aa5.09□□□□□ -1.59
PMS1-216ENST00000447734 ALG1L2C9J202 215 aa5.08□□□□□ -1.6
PMS1-216ENST00000447734 ENC1O14682 589 aa5.08□□□□□ -1.6
PMS1-216ENST00000447734 KIF3BO15066 747 aa5.08□□□□□ -1.6
PMS1-216ENST00000447734 PLIN1O60240 522 aa5.08□□□□□ -1.6
PMS1-216ENST00000447734 MYCLP1P12525 358 aaPredicted RBP5.08□□□□□ -1.6
PMS1-216ENST00000447734 ATP4AP20648 1035 aa5.08□□□□□ -1.6
PMS1-216ENST00000447734 ITGB7P26010 798 aa5.08□□□□□ -1.6
PMS1-216ENST00000447734 SOX5P35711 763 aa5.08□□□□□ -1.6
PMS1-216ENST00000447734 FAM50AQ14320 339 aaKnown RBP5.08□□□□□ -1.6
PMS1-216ENST00000447734 TMEM67Q5HYA8 995 aa5.08□□□□□ -1.6
PMS1-216ENST00000447734 GK5Q6ZS86 529 aa5.08□□□□□ -1.6
PMS1-216ENST00000447734 SPATC1Q76KD6 591 aa5.08□□□□□ -1.6
PMS1-216ENST00000447734 CCDC84Q86UT8 332 aaPredicted RBP5.08□□□□□ -1.6
PMS1-216ENST00000447734 LSRQ86X29 649 aaPredicted RBP5.08□□□□□ -1.6
PMS1-216ENST00000447734 DDX42Q86XP3 938 aaKnown RBP eCLIP5.08□□□□□ -1.6
PMS1-216ENST00000447734 RAVER1Q8IY67 606 aaKnown RBP5.08□□□□□ -1.6
PMS1-216ENST00000447734 ZSWIM2Q8NEG5 633 aa5.08□□□□□ -1.6
PMS1-216ENST00000447734 ST13P5Q8NFI4 369 aaPredicted RBP5.08□□□□□ -1.6
PMS1-216ENST00000447734 GATAD2BQ8WXI9 593 aa5.08□□□□□ -1.6
PMS1-216ENST00000447734 JARID2Q92833 1246 aaPredicted RBP5.08□□□□□ -1.6
PMS1-216ENST00000447734 TSR2Q969E8 191 aaKnown RBP5.08□□□□□ -1.6
PMS1-216ENST00000447734 PLD4Q96BZ4 506 aa5.08□□□□□ -1.6
PMS1-216ENST00000447734 NECAB3Q96P71 396 aaPredicted RBP5.08□□□□□ -1.6
PMS1-216ENST00000447734 TCF12Q99081 682 aa5.08□□□□□ -1.6
PMS1-216ENST00000447734 FAM126AQ9BYI3 521 aaPredicted RBP5.08□□□□□ -1.6
PMS1-216ENST00000447734 DZANK1Q9NVP4 752 aa5.08□□□□□ -1.6
PMS1-216ENST00000447734 ZMYM5Q9UJ78 669 aa5.08□□□□□ -1.6
PMS1-216ENST00000447734 MCM8Q9UJA3 840 aa5.08□□□□□ -1.6
PMS1-216ENST00000447734 ZNRF3Q9ULT6 936 aa5.08□□□□□ -1.6
PMS1-216ENST00000447734 GJA3Q9Y6H8 435 aa5.08□□□□□ -1.6
PMS1-216ENST00000447734 B2RBV5 119 aa5.07□□□□□ -1.6
PMS1-216ENST00000447734 KCNQ2O43526 872 aa5.07□□□□□ -1.6
PMS1-216ENST00000447734 ALDH1L1O75891 902 aa5.07□□□□□ -1.6
PMS1-216ENST00000447734 THBS1P07996 1170 aa5.07□□□□□ -1.6
PMS1-216ENST00000447734 COL8A1P27658 744 aa5.07□□□□□ -1.6
PMS1-216ENST00000447734 PMLP29590 882 aa5.07□□□□□ -1.6
PMS1-216ENST00000447734 STAT3P40763 770 aa5.07□□□□□ -1.6
PMS1-216ENST00000447734 RNF144AP50876 292 aaPredicted RBP5.07□□□□□ -1.6
PMS1-216ENST00000447734 EPHB1P54762 984 aa5.07□□□□□ -1.6
PMS1-216ENST00000447734 CASP7P55210 303 aa5.07□□□□□ -1.6
PMS1-216ENST00000447734 TM4SF20Q53R12 229 aa5.07□□□□□ -1.6
PMS1-216ENST00000447734 AXDND1Q5T1B0 1012 aaPredicted RBP5.07□□□□□ -1.6
PMS1-216ENST00000447734 C1orf229Q6ZS94 237 aaPredicted RBP5.07□□□□□ -1.6
PMS1-216ENST00000447734 REC114Q7Z4M0 266 aa5.07□□□□□ -1.6
PMS1-216ENST00000447734 APBB1IPQ7Z5R6 666 aaPredicted RBP5.07□□□□□ -1.6
PMS1-216ENST00000447734 THNSL2Q86YJ6 484 aa5.07□□□□□ -1.6
PMS1-216ENST00000447734 CCNJLQ8IV13 435 aa5.07□□□□□ -1.6
PMS1-216ENST00000447734 NIM1KQ8IY84 436 aa5.07□□□□□ -1.6
PMS1-216ENST00000447734 GALNT6Q8NCL4 622 aa5.07□□□□□ -1.6
PMS1-216ENST00000447734 NINJ1Q92982 152 aa5.07□□□□□ -1.6
PMS1-216ENST00000447734 GTPBP3Q969Y2 492 aaKnown RBP5.07□□□□□ -1.6
PMS1-216ENST00000447734 ZNF669Q96BR6 464 aaPredicted RBP5.07□□□□□ -1.6
PMS1-216ENST00000447734 ZIC5Q96T25 663 aa5.07□□□□□ -1.6
PMS1-216ENST00000447734 MIR1-1HGQ9H1L0 117 aa5.07□□□□□ -1.6
PMS1-216ENST00000447734 CAAP1Q9H8G2 361 aa5.07□□□□□ -1.6
PMS1-216ENST00000447734 BRMS1Q9HCU9 246 aa5.07□□□□□ -1.6
PMS1-216ENST00000447734 C11orf16Q9NQ32 467 aa5.07□□□□□ -1.6
PMS1-216ENST00000447734 GPN3Q9UHW5 284 aaPredicted RBP5.07□□□□□ -1.6
PMS1-216ENST00000447734 SALL4Q9UJQ4 1053 aa5.07□□□□□ -1.6
PMS1-216ENST00000447734 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP5.07□□□□□ -1.6
PMS1-216ENST00000447734 SPATA31C2B4DYI2 1134 aa5.06□□□□□ -1.6
PMS1-216ENST00000447734 IRS4O14654 1257 aaPredicted RBP5.06□□□□□ -1.6
PMS1-216ENST00000447734 KHNYNO15037 678 aaKnown RBP5.06□□□□□ -1.6
PMS1-216ENST00000447734 TSPAN6O43657 245 aa5.06□□□□□ -1.6
PMS1-216ENST00000447734 PAGE1O75459 146 aa5.06□□□□□ -1.6
PMS1-216ENST00000447734 BPNT1O95861 308 aa5.06□□□□□ -1.6
PMS1-216ENST00000447734 FURINP09958 794 aa5.06□□□□□ -1.6
PMS1-216ENST00000447734 GNALP38405 381 aa5.06□□□□□ -1.6
PMS1-216ENST00000447734 NFKB2Q00653 900 aa5.06□□□□□ -1.6
PMS1-216ENST00000447734 CLCQ05315 142 aa5.06□□□□□ -1.6
PMS1-216ENST00000447734 OS9Q13438 667 aaPredicted RBP5.06□□□□□ -1.6
PMS1-216ENST00000447734 UBE4AQ14139 1066 aa5.06□□□□□ -1.6
Retrieved 100 of 20,778 RNA–protein pairs in 23.2 ms