RNA–Protein interactions for RNA: ENST00000447182.6

SDCBP-204, Transcript of syndecan binding protein, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene SDCBP, Length 2,103 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDCBP-204ENST00000447182 EIF4ENIF1Q9NRA8 985 aaKnown RBP22.04■■□□□ 1.12
SDCBP-204ENST00000447182 H2AFXP16104 143 aaPredicted RBP22.03■■□□□ 1.12
SDCBP-204ENST00000447182 RIC1Q4ADV7 1423 aa22.03■■□□□ 1.12
SDCBP-204ENST00000447182 HSP90AB3PQ58FF7 597 aa22.03■■□□□ 1.12
SDCBP-204ENST00000447182 CPLX2Q6PUV4 134 aaKnown RBP22.03■■□□□ 1.12
SDCBP-204ENST00000447182 PHLPP2Q6ZVD8 1323 aa22.03■■□□□ 1.12
SDCBP-204ENST00000447182 MAP3K14Q99558 947 aa22.03■■□□□ 1.12
SDCBP-204ENST00000447182 SPATA31A3Q5VYP0 1347 aa22.03■■□□□ 1.12
SDCBP-204ENST00000447182 SLFN14P0C7P3 912 aa22.03■■□□□ 1.12
SDCBP-204ENST00000447182 ATP1A3P13637 1013 aa22.03■■□□□ 1.12
SDCBP-204ENST00000447182 ETF1P62495 437 aaKnown RBP22.03■■□□□ 1.12
SDCBP-204ENST00000447182 IFIT5Q13325 482 aaKnown RBP22.03■■□□□ 1.12
SDCBP-204ENST00000447182 MCAMP43121 646 aa22.02■■□□□ 1.12
SDCBP-204ENST00000447182 UBASH3AP57075 661 aa22.02■■□□□ 1.12
SDCBP-204ENST00000447182 TAF7LQ5H9L4 462 aa22.02■■□□□ 1.12
SDCBP-204ENST00000447182 APOA5Q6Q788 366 aa22.02■■□□□ 1.12
SDCBP-204ENST00000447182 PI16Q6UXB8 463 aa22.02■■□□□ 1.12
SDCBP-204ENST00000447182 TBC1D10CQ8IV04 446 aa22.02■■□□□ 1.12
SDCBP-204ENST00000447182 ELOA2Q8IYF1 753 aaPredicted RBP22.02■■□□□ 1.12
SDCBP-204ENST00000447182 CYB5R4Q7L1T6 521 aa22.01■■□□□ 1.11
SDCBP-204ENST00000447182 TMEM87BQ96K49 555 aa22.01■■□□□ 1.11
SDCBP-204ENST00000447182 AIFM3Q96NN9 605 aa22.01■■□□□ 1.11
SDCBP-204ENST00000447182 BCL11BQ9C0K0 894 aaPredicted RBP22.01■■□□□ 1.11
SDCBP-204ENST00000447182 RIPOR2Q9Y4F9 1068 aa22.01■■□□□ 1.11
SDCBP-204ENST00000447182 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP22.01■■□□□ 1.11
SDCBP-204ENST00000447182 WDR17Q8IZU2 1322 aa22.01■■□□□ 1.11
SDCBP-204ENST00000447182 TTF1Q15361 905 aaPredicted RBP22.01■■□□□ 1.11
SDCBP-204ENST00000447182 UBE3CQ15386 1083 aa22.01■■□□□ 1.11
SDCBP-204ENST00000447182 FCHSD1Q86WN1 690 aa22.01■■□□□ 1.11
SDCBP-204ENST00000447182 ZBTB38Q8NAP3 1195 aaPredicted RBP22.01■■□□□ 1.11
SDCBP-204ENST00000447182 ECM29Q5VYK3 1845 aa22.01■■□□□ 1.11
SDCBP-204ENST00000447182 CUTAO60888 179 aa22■■□□□ 1.11
SDCBP-204ENST00000447182 NTRK3Q16288 839 aa22■■□□□ 1.11
SDCBP-204ENST00000447182 VSTM4Q8IW00 320 aa22■■□□□ 1.11
SDCBP-204ENST00000447182 CDC27P30260 824 aa22■■□□□ 1.11
SDCBP-204ENST00000447182 TERF2Q15554 542 aa22■■□□□ 1.11
SDCBP-204ENST00000447182 ERCC6LQ2NKX8 1250 aa22■■□□□ 1.11
SDCBP-204ENST00000447182 ZNF446Q9NWS9 450 aa22■■□□□ 1.11
SDCBP-204ENST00000447182 MAP3K15Q6ZN16 1313 aa21.99■■□□□ 1.11
SDCBP-204ENST00000447182 IGSF3O75054 1194 aa21.99■■□□□ 1.11
SDCBP-204ENST00000447182 SERPINC1P01008 464 aa21.99■■□□□ 1.11
SDCBP-204ENST00000447182 PNOCQ13519 176 aa21.99■■□□□ 1.11
SDCBP-204ENST00000447182 ISM2Q6H9L7 571 aa21.99■■□□□ 1.11
SDCBP-204ENST00000447182 SGMS1Q86VZ5 419 aa21.99■■□□□ 1.11
SDCBP-204ENST00000447182 DPF2Q92785 391 aa21.99■■□□□ 1.11
SDCBP-204ENST00000447182 FAM89AQ96GI7 184 aa21.99■■□□□ 1.11
SDCBP-204ENST00000447182 DENND2AQ9ULE3 1009 aa21.99■■□□□ 1.11
SDCBP-204ENST00000447182 CDHR2Q9BYE9 1310 aa21.99■■□□□ 1.11
SDCBP-204ENST00000447182 FAM193AP78312 1265 aa21.98■■□□□ 1.11
SDCBP-204ENST00000447182 GNL2Q13823 731 aaKnown RBP21.98■■□□□ 1.11
SDCBP-204ENST00000447182 SLC9C2Q5TAH2 1124 aa21.98■■□□□ 1.11
SDCBP-204ENST00000447182 TRIM65Q6PJ69 517 aa21.98■■□□□ 1.11
SDCBP-204ENST00000447182 OLFM4Q6UX06 510 aa21.98■■□□□ 1.11
SDCBP-204ENST00000447182 ZNF771Q7L3S4 317 aaPredicted RBP21.98■■□□□ 1.11
SDCBP-204ENST00000447182 METTL16Q86W50 562 aaKnown RBP21.98■■□□□ 1.11
SDCBP-204ENST00000447182 IGDCC4Q8TDY8 1250 aa21.98■■□□□ 1.11
SDCBP-204ENST00000447182 SRRTQ9BXP5 876 aaKnown RBP21.98■■□□□ 1.11
SDCBP-204ENST00000447182 STK36Q9NRP7 1315 aa21.98■■□□□ 1.11
SDCBP-204ENST00000447182 METTL24Q5JXM2 366 aa21.98■■□□□ 1.11
SDCBP-204ENST00000447182 CCDC102BQ68D86 513 aa21.98■■□□□ 1.11
SDCBP-204ENST00000447182 KRBA2Q6ZNG9 492 aa21.98■■□□□ 1.11
SDCBP-204ENST00000447182 HOMER1Q86YM7 354 aa21.98■■□□□ 1.11
SDCBP-204ENST00000447182 NKX2-3Q8TAU0 364 aa21.98■■□□□ 1.11
SDCBP-204ENST00000447182 GNL3Q9BVP2 549 aaKnown RBP eCLIP21.98■■□□□ 1.11
SDCBP-204ENST00000447182 ZBTB43O43298 467 aa21.97■■□□□ 1.11
SDCBP-204ENST00000447182 IARSP41252 1262 aaKnown RBP21.97■■□□□ 1.11
SDCBP-204ENST00000447182 CFAP100Q494V2 611 aa21.97■■□□□ 1.11
SDCBP-204ENST00000447182 TRIM29Q14134 588 aa21.97■■□□□ 1.11
SDCBP-204ENST00000447182 BMS1Q14692 1282 aaKnown RBP21.97■■□□□ 1.11
SDCBP-204ENST00000447182 ALX1Q15699 326 aa21.97■■□□□ 1.11
SDCBP-204ENST00000447182 PHKBQ93100 1093 aa21.97■■□□□ 1.11
SDCBP-204ENST00000447182 CCDC85AQ96PX6 553 aaPredicted RBP21.97■■□□□ 1.11
SDCBP-204ENST00000447182 FAM217BQ9NTX9 383 aaPredicted RBP21.97■■□□□ 1.11
SDCBP-204ENST00000447182 KCNH3Q9ULD8 1083 aa21.97■■□□□ 1.11
SDCBP-204ENST00000447182 SHANK3Q9BYB0 1731 aa21.96■■□□□ 1.11
SDCBP-204ENST00000447182 LIFRP42702 1097 aa21.96■■□□□ 1.11
SDCBP-204ENST00000447182 LONRF3Q496Y0 759 aa21.96■■□□□ 1.11
SDCBP-204ENST00000447182 REXO1L1PQ8IX06 675 aa21.96■■□□□ 1.11
SDCBP-204ENST00000447182 VGLL2Q8N8G2 317 aa21.96■■□□□ 1.11
SDCBP-204ENST00000447182 LRRN4CLQ8ND94 238 aa21.96■■□□□ 1.11
SDCBP-204ENST00000447182 CLIC6Q96NY7 704 aa21.96■■□□□ 1.11
SDCBP-204ENST00000447182 LY9Q9HBG7 655 aa21.96■■□□□ 1.11
SDCBP-204ENST00000447182 UBN2Q6ZU65 1347 aa21.96■■□□□ 1.11
SDCBP-204ENST00000447182 B4E1Z4 1266 aa21.95■■□□□ 1.11
SDCBP-204ENST00000447182 RANBP6O60518 1105 aaKnown RBP21.95■■□□□ 1.11
SDCBP-204ENST00000447182 TOP1P11387 765 aaKnown RBP21.95■■□□□ 1.11
SDCBP-204ENST00000447182 LDHAL6AQ6ZMR3 332 aa21.95■■□□□ 1.11
SDCBP-204ENST00000447182 KIF6Q6ZMV9 814 aa21.95■■□□□ 1.11
SDCBP-204ENST00000447182 MICU3Q86XE3 530 aa21.95■■□□□ 1.11
SDCBP-204ENST00000447182 FOXP4Q8IVH2 680 aaPredicted RBP21.95■■□□□ 1.11
SDCBP-204ENST00000447182 CNNM3Q8NE01 707 aa21.95■■□□□ 1.11
SDCBP-204ENST00000447182 SYTL4Q96C24 671 aaPredicted RBP21.95■■□□□ 1.11
SDCBP-204ENST00000447182 SENP2Q9HC62 589 aa21.95■■□□□ 1.11
SDCBP-204ENST00000447182 DNAI1Q9UI46 699 aa21.95■■□□□ 1.11
SDCBP-204ENST00000447182 LRP6O75581 1613 aa21.95■■□□□ 1.1
SDCBP-204ENST00000447182 ZSCAN12O43309 604 aa21.95■■□□□ 1.1
SDCBP-204ENST00000447182 RXRAP19793 462 aa21.95■■□□□ 1.1
SDCBP-204ENST00000447182 MDM2Q00987 491 aaPredicted RBP21.95■■□□□ 1.1
SDCBP-204ENST00000447182 TOM1L2Q6ZVM7 507 aa21.95■■□□□ 1.1
SDCBP-204ENST00000447182 PIH1D3Q9NQM4 214 aaKnown RBP21.95■■□□□ 1.1
Retrieved 100 of 20,778 RNA–protein pairs in 22.1 ms