RNA–Protein interactions for RNA: ENST00000443197.5

CALD1-210, Transcript of caldesmon 1, humanhuman

TSL 5

Gene CALD1, Length 4,173 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CALD1-210ENST00000443197 ZDHHC9Q9Y397 364 aa12.23□□□□□ -0.45
CALD1-210ENST00000443197 KIF5BP33176 963 aa12.23□□□□□ -0.45
CALD1-210ENST00000443197 UBE3CQ15386 1083 aa12.23□□□□□ -0.45
CALD1-210ENST00000443197 LUZP1Q86V48 1076 aa12.23□□□□□ -0.45
CALD1-210ENST00000443197 TEX11Q8IYF3 940 aa12.23□□□□□ -0.45
CALD1-210ENST00000443197 TGFBRAP1Q8WUH2 860 aa12.23□□□□□ -0.45
CALD1-210ENST00000443197 TMEM87BQ96K49 555 aa12.23□□□□□ -0.45
CALD1-210ENST00000443197 FTOQ9C0B1 505 aaKnown RBP eCLIP12.23□□□□□ -0.452e-6■■□□□ 12.1
CALD1-210ENST00000443197 PEAK1Q9H792 1746 aa12.23□□□□□ -0.45
CALD1-210ENST00000443197 UTYO14607 1347 aa12.22□□□□□ -0.45
CALD1-210ENST00000443197 TYRO3Q06418 890 aa12.22□□□□□ -0.45
CALD1-210ENST00000443197 CFAP100Q494V2 611 aa12.22□□□□□ -0.45
CALD1-210ENST00000443197 GJB4Q9NTQ9 266 aa12.22□□□□□ -0.45
CALD1-210ENST00000443197 CEP131Q9UPN4 1083 aa12.22□□□□□ -0.45
CALD1-210ENST00000443197 RIPOR2Q9Y4F9 1068 aa12.22□□□□□ -0.45
CALD1-210ENST00000443197 A0A0G2JLW4 131 aa12.22□□□□□ -0.45
CALD1-210ENST00000443197 TPM1P09493 284 aa12.22□□□□□ -0.45
CALD1-210ENST00000443197 LIG1P18858 919 aa12.22□□□□□ -0.45
CALD1-210ENST00000443197 PPARAQ07869 468 aa12.22□□□□□ -0.45
CALD1-210ENST00000443197 HEATR3Q7Z4Q2 680 aa12.22□□□□□ -0.45
CALD1-210ENST00000443197 ARHGEF1Q92888 912 aaKnown RBP12.22□□□□□ -0.45
CALD1-210ENST00000443197 COL15A1P39059 1388 aa12.22□□□□□ -0.45
CALD1-210ENST00000443197 ZNF804BA4D1E1 1349 aa12.22□□□□□ -0.45
CALD1-210ENST00000443197 GTF2IP78347 998 aa12.22□□□□□ -0.45
CALD1-210ENST00000443197 TOB2Q14106 344 aaPredicted RBP12.22□□□□□ -0.45
CALD1-210ENST00000443197 TSR1Q2NL82 804 aaKnown RBP12.22□□□□□ -0.45
CALD1-210ENST00000443197 KCNG4Q8TDN1 519 aa12.22□□□□□ -0.45
CALD1-210ENST00000443197 LLPHQ9BRT6 129 aaKnown RBP12.22□□□□□ -0.45
CALD1-210ENST00000443197 CABP5Q9NP86 173 aa12.22□□□□□ -0.45
CALD1-210ENST00000443197 TMOD2Q9NZR1 351 aa12.22□□□□□ -0.45
CALD1-210ENST00000443197 SALL3Q9BXA9 1300 aa12.22□□□□□ -0.45
CALD1-210ENST00000443197 PFKFB2O60825 505 aa12.22□□□□□ -0.45
CALD1-210ENST00000443197 AFMP43652 599 aa12.21□□□□□ -0.45
CALD1-210ENST00000443197 TTC14Q96N46 770 aa12.21□□□□□ -0.45
CALD1-210ENST00000443197 USP28Q96RU2 1077 aa12.21□□□□□ -0.45
CALD1-210ENST00000443197 PXDNLA1KZ92 1463 aa12.21□□□□□ -0.45
CALD1-210ENST00000443197 UBE4AQ14139 1066 aa12.21□□□□□ -0.45
CALD1-210ENST00000443197 KRT40Q6A162 431 aa12.21□□□□□ -0.45
CALD1-210ENST00000443197 TTC12Q9H892 705 aaPredicted RBP12.21□□□□□ -0.45
CALD1-210ENST00000443197 COL5A2P05997 1499 aaPredicted RBP12.21□□□□□ -0.46
CALD1-210ENST00000443197 RPS6KA4O75676 772 aa12.21□□□□□ -0.46
CALD1-210ENST00000443197 SERPINB2P05120 415 aa12.21□□□□□ -0.46
CALD1-210ENST00000443197 GLIPR1L2Q4G1C9 344 aa12.21□□□□□ -0.46
CALD1-210ENST00000443197 MFSD14BQ5SR56 506 aa12.21□□□□□ -0.46
CALD1-210ENST00000443197 FAM177A1Q8N128 213 aaPredicted RBP12.21□□□□□ -0.46
CALD1-210ENST00000443197 CTAGE5O15320 804 aa12.2□□□□□ -0.46
CALD1-210ENST00000443197 DOK7Q18PE1 504 aa12.2□□□□□ -0.46
CALD1-210ENST00000443197 KRT27Q7Z3Y8 459 aa12.2□□□□□ -0.46
CALD1-210ENST00000443197 ZNF274Q96GC6 653 aaPredicted RBP12.2□□□□□ -0.46
CALD1-210ENST00000443197 TCEAL9Q9UHQ7 104 aa12.2□□□□□ -0.46
CALD1-210ENST00000443197 DIS3L2Q8IYB7 885 aaKnown RBP12.2□□□□□ -0.46
CALD1-210ENST00000443197 WDR66Q8TBY9 1149 aa12.2□□□□□ -0.46
CALD1-210ENST00000443197 AIFM3Q96NN9 605 aa12.2□□□□□ -0.46
CALD1-210ENST00000443197 CLIP2Q9UDT6 1046 aa12.2□□□□□ -0.46
CALD1-210ENST00000443197 NCOA3Q9Y6Q9 1424 aa12.2□□□□□ -0.46
CALD1-210ENST00000443197 LINC00116Q8NCU8 138 aa12.2□□□□□ -0.46
CALD1-210ENST00000443197 GJD4Q96KN9 370 aaPredicted RBP12.2□□□□□ -0.46
CALD1-210ENST00000443197 TFAP4Q01664 338 aa12.19□□□□□ -0.46
CALD1-210ENST00000443197 STX1AQ16623 288 aa12.19□□□□□ -0.46
CALD1-210ENST00000443197 DPP8Q6V1X1 898 aaPredicted RBP12.19□□□□□ -0.46
CALD1-210ENST00000443197 STOX1Q6ZVD7 989 aa12.19□□□□□ -0.46
CALD1-210ENST00000443197 NSUN7Q8NE18 718 aaKnown RBP12.19□□□□□ -0.46
CALD1-210ENST00000443197 FAM200AQ8TCP9 573 aa12.19□□□□□ -0.46
CALD1-210ENST00000443197 SLC4A9Q96Q91 983 aa12.19□□□□□ -0.46
CALD1-210ENST00000443197 MINPP1Q9UNW1 487 aa12.19□□□□□ -0.46
CALD1-210ENST00000443197 UBN2Q6ZU65 1347 aa12.19□□□□□ -0.46
CALD1-210ENST00000443197 CAMTA2O94983 1202 aa12.19□□□□□ -0.46
CALD1-210ENST00000443197 HSPA1LP34931 641 aa12.19□□□□□ -0.46
CALD1-210ENST00000443197 DIXDC1Q155Q3 683 aa12.19□□□□□ -0.46
CALD1-210ENST00000443197 CLEC4GQ6UXB4 293 aa12.19□□□□□ -0.46
CALD1-210ENST00000443197 ZNF34Q8IZ26 560 aa12.19□□□□□ -0.46
CALD1-210ENST00000443197 ZSWIM5Q9P217 1185 aa12.19□□□□□ -0.46
CALD1-210ENST00000443197 CDHR2Q9BYE9 1310 aa12.19□□□□□ -0.46
CALD1-210ENST00000443197 KNDC1Q76NI1 1749 aa12.19□□□□□ -0.46
CALD1-210ENST00000443197 ZNF445P59923 1031 aa12.19□□□□□ -0.46
CALD1-210ENST00000443197 TCP10Q12799 353 aa12.19□□□□□ -0.46
CALD1-210ENST00000443197 VPS54Q9P1Q0 977 aa12.19□□□□□ -0.46
CALD1-210ENST00000443197 NARFQ9UHQ1 456 aa12.19□□□□□ -0.46
CALD1-210ENST00000443197 TNKSO95271 1327 aa12.19□□□□□ -0.46
CALD1-210ENST00000443197 USP42Q9H9J4 1324 aaKnown RBP12.19□□□□□ -0.46
CALD1-210ENST00000443197 NR1I2O75469 434 aa12.19□□□□□ -0.46
CALD1-210ENST00000443197 HLA-DOAP06340 250 aa12.19□□□□□ -0.46
CALD1-210ENST00000443197 CSF1RP07333 972 aa12.19□□□□□ -0.46
CALD1-210ENST00000443197 TPM2P07951 284 aa12.19□□□□□ -0.46
CALD1-210ENST00000443197 STRBPQ96SI9 672 aaKnown RBP12.19□□□□□ -0.46
CALD1-210ENST00000443197 SPATA31A5Q5VU36 1347 aa12.18□□□□□ -0.46
CALD1-210ENST00000443197 SPATA31A7Q8IWB4 1347 aa12.18□□□□□ -0.46
CALD1-210ENST00000443197 KRT18P05783 430 aaKnown RBP12.18□□□□□ -0.46
CALD1-210ENST00000443197 SCNN1DP51172 638 aa12.18□□□□□ -0.46
CALD1-210ENST00000443197 ZNF654Q8IZM8 581 aa12.18□□□□□ -0.46
CALD1-210ENST00000443197 AOPEPQ8N6M6 819 aa12.18□□□□□ -0.46
CALD1-210ENST00000443197 ZNF609O15014 1411 aa12.18□□□□□ -0.46
CALD1-210ENST00000443197 PRDX5P30044 214 aa12.18□□□□□ -0.46
CALD1-210ENST00000443197 ZNF174Q15697 407 aa12.18□□□□□ -0.46
CALD1-210ENST00000443197 ANO1Q5XXA6 986 aa12.18□□□□□ -0.46
CALD1-210ENST00000443197 TRMT1LQ7Z2T5 733 aaKnown RBP12.18□□□□□ -0.46
CALD1-210ENST00000443197 NOC3LQ8WTT2 800 aaKnown RBP12.18□□□□□ -0.46
CALD1-210ENST00000443197 MCM7P33993 719 aa12.18□□□□□ -0.46
CALD1-210ENST00000443197 RBM10P98175 930 aaKnown RBP12.18□□□□□ -0.46
CALD1-210ENST00000443197 INTS5Q6P9B9 1019 aaKnown RBP12.18□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 24.3 ms