RNA–Protein interactions for RNA: ENST00000441756.1

MCF2L-217, Transcript of MCF.2 cell line derived transforming sequence like, humanhuman

TSL 3

Gene MCF2L, Length 370 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MCF2L-217ENST00000441756 KCNQ5Q9NR82 932 aa18.96■□□□□ 0.63
MCF2L-217ENST00000441756 AATFQ9NY61 560 aaKnown RBP eCLIP18.96■□□□□ 0.63
MCF2L-217ENST00000441756 HDAC9Q9UKV0 1011 aa18.96■□□□□ 0.63
MCF2L-217ENST00000441756 GPR75-ASB3A0A0A6YYF3 556 aa18.95■□□□□ 0.62
MCF2L-217ENST00000441756 F8W031 263 aaPredicted RBP18.95■□□□□ 0.62
MCF2L-217ENST00000441756 PSMD14O00487 310 aa18.95■□□□□ 0.62
MCF2L-217ENST00000441756 SLC27A2O14975 620 aa18.95■□□□□ 0.62
MCF2L-217ENST00000441756 RAD17O75943 681 aa18.95■□□□□ 0.62
MCF2L-217ENST00000441756 BTDP43251 543 aa18.95■□□□□ 0.62
MCF2L-217ENST00000441756 TDO2P48775 406 aa18.95■□□□□ 0.62
MCF2L-217ENST00000441756 KIAA0825Q8IV33 1275 aa18.95■□□□□ 0.62
MCF2L-217ENST00000441756 KCNB2Q92953 911 aa18.95■□□□□ 0.62
MCF2L-217ENST00000441756 SERPINA10Q9UK55 444 aa18.95■□□□□ 0.62
MCF2L-217ENST00000441756 RPS12P25398 132 aaKnown RBP18.94■□□□□ 0.62
MCF2L-217ENST00000441756 PSMA5P28066 241 aa18.94■□□□□ 0.62
MCF2L-217ENST00000441756 DYNLL1P63167 89 aaKnown RBP18.94■□□□□ 0.62
MCF2L-217ENST00000441756 OGFOD1Q8N543 542 aa18.94■□□□□ 0.62
MCF2L-217ENST00000441756 ATP8A2Q9NTI2 1148 aa18.94■□□□□ 0.62
MCF2L-217ENST00000441756 DAGLAQ9Y4D2 1042 aa18.94■□□□□ 0.62
MCF2L-217ENST00000441756 GSG1L2A8MUP6 293 aa18.93■□□□□ 0.62
MCF2L-217ENST00000441756 FGAP02671 866 aa18.93■□□□□ 0.62
MCF2L-217ENST00000441756 CXCL9Q07325 125 aa18.93■□□□□ 0.62
MCF2L-217ENST00000441756 TSGA10IPQ3SY00 556 aa18.93■□□□□ 0.62
MCF2L-217ENST00000441756 AMOTL1Q8IY63 956 aa18.93■□□□□ 0.62
MCF2L-217ENST00000441756 IFNL3Q8IZI9 196 aa18.93■□□□□ 0.62
MCF2L-217ENST00000441756 ZDHHC15Q96MV8 337 aa18.93■□□□□ 0.62
MCF2L-217ENST00000441756 MXD3Q9BW11 206 aa18.93■□□□□ 0.62
MCF2L-217ENST00000441756 SNX14Q9Y5W7 946 aa18.93■□□□□ 0.62
MCF2L-217ENST00000441756 LAMA4Q16363 1823 aa18.93■□□□□ 0.62
MCF2L-217ENST00000441756 DICER1Q9UPY3 1922 aaKnown RBP18.92■□□□□ 0.62
MCF2L-217ENST00000441756 FZD9O00144 591 aa18.92■□□□□ 0.62
MCF2L-217ENST00000441756 ZNF213O14771 459 aa18.92■□□□□ 0.62
MCF2L-217ENST00000441756 FOXP2O15409 715 aa18.92■□□□□ 0.62
MCF2L-217ENST00000441756 GRIN3BO60391 1043 aa18.92■□□□□ 0.62
MCF2L-217ENST00000441756 USP5P45974 858 aa18.92■□□□□ 0.62
MCF2L-217ENST00000441756 CRKP46108 304 aa18.92■□□□□ 0.62
MCF2L-217ENST00000441756 SCNN1DP51172 638 aa18.92■□□□□ 0.62
MCF2L-217ENST00000441756 GPR162Q16538 588 aa18.92■□□□□ 0.62
MCF2L-217ENST00000441756 TM6SF1Q9BZW5 370 aa18.92■□□□□ 0.62
MCF2L-217ENST00000441756 PALD1Q9ULE6 856 aa18.92■□□□□ 0.62
MCF2L-217ENST00000441756 ST18O60284 1047 aa18.91■□□□□ 0.62
MCF2L-217ENST00000441756 YBX3P16989 372 aaKnown RBP eCLIP18.91■□□□□ 0.62
MCF2L-217ENST00000441756 RBM5P52756 815 aaKnown RBP eCLIP18.91■□□□□ 0.62
MCF2L-217ENST00000441756 TEX11Q8IYF3 940 aa18.91■□□□□ 0.62
MCF2L-217ENST00000441756 GMLQ99445 158 aa18.91■□□□□ 0.62
MCF2L-217ENST00000441756 KIF2CQ99661 725 aa18.91■□□□□ 0.62
MCF2L-217ENST00000441756 EPB41L4AQ9HCS5 686 aaPredicted RBP18.91■□□□□ 0.62
MCF2L-217ENST00000441756 ARPP21Q9UBL0 812 aaPredicted RBP18.91■□□□□ 0.62
MCF2L-217ENST00000441756 PRKAB2O43741 272 aa18.9■□□□□ 0.62
MCF2L-217ENST00000441756 CYP21A2P08686 494 aa18.9■□□□□ 0.62
MCF2L-217ENST00000441756 USP17L8P0C7I0 530 aa18.9■□□□□ 0.62
MCF2L-217ENST00000441756 BECN1Q14457 450 aa18.9■□□□□ 0.62
MCF2L-217ENST00000441756 SH3RF3Q8TEJ3 882 aaPredicted RBP18.9■□□□□ 0.62
MCF2L-217ENST00000441756 SDR42E1Q8WUS8 393 aa18.9■□□□□ 0.62
MCF2L-217ENST00000441756 TIAM2Q8IVF5 1701 aa18.89■□□□□ 0.61
MCF2L-217ENST00000441756 HMGB1P09429 215 aaKnown RBP18.89■□□□□ 0.61
MCF2L-217ENST00000441756 RASEFQ8IZ41 740 aa18.89■□□□□ 0.61
MCF2L-217ENST00000441756 JAKMIP1Q96N16 626 aaKnown RBP18.89■□□□□ 0.61
MCF2L-217ENST00000441756 NAV1Q8NEY1 1877 aa18.88■□□□□ 0.61
MCF2L-217ENST00000441756 SLC3A2P08195 630 aaKnown RBP18.88■□□□□ 0.61
MCF2L-217ENST00000441756 PRELPP51888 382 aa18.88■□□□□ 0.61
MCF2L-217ENST00000441756 DPF2Q92785 391 aa18.88■□□□□ 0.61
MCF2L-217ENST00000441756 RNF41Q9H4P4 317 aaPredicted RBP18.88■□□□□ 0.61
MCF2L-217ENST00000441756 DCP1AQ9NPI6 582 aaPredicted RBP18.88■□□□□ 0.61
MCF2L-217ENST00000441756 RNF181Q9P0P0 153 aa18.88■□□□□ 0.61
MCF2L-217ENST00000441756 CYP46A1Q9Y6A2 500 aa18.88■□□□□ 0.61
MCF2L-217ENST00000441756 SBF1O95248 1867 aa18.88■□□□□ 0.61
MCF2L-217ENST00000441756 LAMB1P07942 1786 aa18.87■□□□□ 0.61
MCF2L-217ENST00000441756 CASTP20810 708 aaKnown RBP18.87■□□□□ 0.61
MCF2L-217ENST00000441756 RHBDL3P58872 404 aa18.87■□□□□ 0.61
MCF2L-217ENST00000441756 TRDNQ13061 729 aa18.87■□□□□ 0.61
MCF2L-217ENST00000441756 DLGAP5Q15398 846 aa18.87■□□□□ 0.61
MCF2L-217ENST00000441756 CFAP100Q494V2 611 aa18.87■□□□□ 0.61
MCF2L-217ENST00000441756 SBK1Q52WX2 424 aa18.87■□□□□ 0.61
MCF2L-217ENST00000441756 BLOC1S2Q6QNY1 142 aa18.87■□□□□ 0.61
MCF2L-217ENST00000441756 RALYLQ86SE5 291 aaKnown RBP18.87■□□□□ 0.61
MCF2L-217ENST00000441756 USP40Q9NVE5 1235 aa18.87■□□□□ 0.61
MCF2L-217ENST00000441756 TMOD2Q9NZR1 351 aa18.87■□□□□ 0.61
MCF2L-217ENST00000441756 FOCADQ5VW36 1801 aa18.86■□□□□ 0.61
MCF2L-217ENST00000441756 ADAMTSL1Q8N6G6 1762 aa18.86■□□□□ 0.61
MCF2L-217ENST00000441756 ZC3H4Q9UPT8 1303 aaKnown RBP18.86■□□□□ 0.61
MCF2L-217ENST00000441756 E7EWF7 191 aa18.86■□□□□ 0.61
MCF2L-217ENST00000441756 PCP11498 1178 aaKnown RBP18.86■□□□□ 0.61
MCF2L-217ENST00000441756 APOBEC3HQ6NTF7 200 aaKnown RBP18.86■□□□□ 0.61
MCF2L-217ENST00000441756 HSCBQ8IWL3 235 aa18.86■□□□□ 0.61
MCF2L-217ENST00000441756 GPC2Q8N158 579 aa18.86■□□□□ 0.61
MCF2L-217ENST00000441756 MTMR14Q8NCE2 650 aa18.86■□□□□ 0.61
MCF2L-217ENST00000441756 TGFBRAP1Q8WUH2 860 aa18.86■□□□□ 0.61
MCF2L-217ENST00000441756 NEK1Q96PY6 1258 aa18.86■□□□□ 0.61
MCF2L-217ENST00000441756 CNNM2Q9H8M5 875 aa18.86■□□□□ 0.61
MCF2L-217ENST00000441756 MCM9Q9NXL9 1143 aa18.86■□□□□ 0.61
MCF2L-217ENST00000441756 DAXXQ9UER7 740 aaPredicted RBP18.86■□□□□ 0.61
MCF2L-217ENST00000441756 ANAPC4Q9UJX5 808 aa18.86■□□□□ 0.61
MCF2L-217ENST00000441756 ZBTB12Q9Y330 459 aaPredicted RBP18.86■□□□□ 0.61
MCF2L-217ENST00000441756 GJA3Q9Y6H8 435 aa18.86■□□□□ 0.61
MCF2L-217ENST00000441756 FLT1P17948 1338 aa18.85■□□□□ 0.61
MCF2L-217ENST00000441756 MYO1BO43795 1136 aa18.85■□□□□ 0.61
MCF2L-217ENST00000441756 MCM2P49736 904 aa18.85■□□□□ 0.61
MCF2L-217ENST00000441756 NT5C2P49902 561 aa18.85■□□□□ 0.61
MCF2L-217ENST00000441756 NEK4P51957 841 aa18.85■□□□□ 0.61
Retrieved 100 of 20,778 RNA–protein pairs in 14.2 ms