RNA–Protein interactions for RNA: ENST00000439128.6

NEK1-201, Transcript of NIMA related kinase 1, humanhuman

TSL 1 (best) BASIC

Gene NEK1, Length 5,653 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEK1-201ENST00000439128 ZBTB38Q8NAP3 1195 aaPredicted RBP13.73□□□□□ -0.21
NEK1-201ENST00000439128 CHURC1Q8WUH1 139 aa13.73□□□□□ -0.21
NEK1-201ENST00000439128 XDHP47989 1333 aa13.72□□□□□ -0.21
NEK1-201ENST00000439128 SMTNP53814 917 aa13.72□□□□□ -0.21
NEK1-201ENST00000439128 CHRNDQ07001 517 aa13.72□□□□□ -0.21
NEK1-201ENST00000439128 BMS1Q14692 1282 aaKnown RBP13.72□□□□□ -0.21
NEK1-201ENST00000439128 DTHD1Q6ZMT9 781 aa13.72□□□□□ -0.21
NEK1-201ENST00000439128 UIMC1Q96RL1 719 aa13.72□□□□□ -0.21
NEK1-201ENST00000439128 MYO5CQ9NQX4 1742 aa13.72□□□□□ -0.21
NEK1-201ENST00000439128 C21orf2O43822 256 aa13.72□□□□□ -0.21
NEK1-201ENST00000439128 HDAC1Q13547 482 aaPredicted RBP13.72□□□□□ -0.21
NEK1-201ENST00000439128 ARHGEF16Q5VV41 709 aa13.72□□□□□ -0.21
NEK1-201ENST00000439128 ZNF532Q9HCE3 1301 aa13.72□□□□□ -0.21
NEK1-201ENST00000439128 BTDP43251 543 aa13.72□□□□□ -0.21
NEK1-201ENST00000439128 CCDC183Q5T5S1 534 aa13.72□□□□□ -0.21
NEK1-201ENST00000439128 CREB3L3Q68CJ9 461 aa13.72□□□□□ -0.21
NEK1-201ENST00000439128 APPBP2Q92624 585 aa13.72□□□□□ -0.21
NEK1-201ENST00000439128 RNF181Q9P0P0 153 aa13.72□□□□□ -0.21
NEK1-201ENST00000439128 ZNF804BA4D1E1 1349 aa13.72□□□□□ -0.21
NEK1-201ENST00000439128 MLH3Q9UHC1 1453 aa13.72□□□□□ -0.21
NEK1-201ENST00000439128 NEURL1BA8MQ27 555 aa13.72□□□□□ -0.21
NEK1-201ENST00000439128 SFPQP23246 707 aaKnown RBP eCLIP13.72□□□□□ -0.21
NEK1-201ENST00000439128 GJC1P36383 396 aa13.72□□□□□ -0.21
NEK1-201ENST00000439128 CCT6AP40227 531 aaKnown RBP13.72□□□□□ -0.21
NEK1-201ENST00000439128 ARHGEF25Q86VW2 580 aa13.72□□□□□ -0.21
NEK1-201ENST00000439128 FNBP1Q96RU3 617 aa13.72□□□□□ -0.21
NEK1-201ENST00000439128 SPON1Q9HCB6 807 aa13.72□□□□□ -0.21
NEK1-201ENST00000439128 CHD1O14646 1710 aa13.71□□□□□ -0.21
NEK1-201ENST00000439128 CCNA1P78396 465 aa13.71□□□□□ -0.21
NEK1-201ENST00000439128 BIRC3Q13489 604 aa13.71□□□□□ -0.21
NEK1-201ENST00000439128 CERKLQ49MI3 558 aaPredicted RBP13.71□□□□□ -0.21
NEK1-201ENST00000439128 CIAPIN1Q6FI81 312 aa13.71□□□□□ -0.21
NEK1-201ENST00000439128 LUZP1Q86V48 1076 aa13.71□□□□□ -0.21
NEK1-201ENST00000439128 OTUD6BQ8N6M0 293 aa13.71□□□□□ -0.21
NEK1-201ENST00000439128 NACA2Q9H009 215 aa13.71□□□□□ -0.21
NEK1-201ENST00000439128 TAOK3Q9H2K8 898 aa13.71□□□□□ -0.21
NEK1-201ENST00000439128 ZBTB24O43167 697 aaPredicted RBP13.71□□□□□ -0.21
NEK1-201ENST00000439128 FLOT1O75955 427 aa13.71□□□□□ -0.21
NEK1-201ENST00000439128 NCAPH2Q6IBW4 605 aa13.71□□□□□ -0.21
NEK1-201ENST00000439128 RTKN2Q8IZC4 609 aa13.71□□□□□ -0.21
NEK1-201ENST00000439128 C2orf69Q8N8R5 385 aa13.71□□□□□ -0.21
NEK1-201ENST00000439128 PROCA1Q8NCQ7 364 aaPredicted RBP13.71□□□□□ -0.21
NEK1-201ENST00000439128 BCAMP50895 628 aa13.71□□□□□ -0.21
NEK1-201ENST00000439128 FAM47AQ5JRC9 791 aa13.71□□□□□ -0.21
NEK1-201ENST00000439128 GJD4Q96KN9 370 aaPredicted RBP13.71□□□□□ -0.21
NEK1-201ENST00000439128 CCNT1O60563 726 aaKnown RBP13.71□□□□□ -0.22
NEK1-201ENST00000439128 IL6STP40189 918 aaPredicted RBP13.71□□□□□ -0.22
NEK1-201ENST00000439128 TNNQ9UQP3 1299 aa13.71□□□□□ -0.22
NEK1-201ENST00000439128 GIGYF1O75420 1035 aaPredicted RBP13.7□□□□□ -0.22
NEK1-201ENST00000439128 TFAP4Q01664 338 aa13.7□□□□□ -0.22
NEK1-201ENST00000439128 R3HDM1Q15032 1099 aaKnown RBP13.7□□□□□ -0.22
NEK1-201ENST00000439128 NDUFB9Q9Y6M9 179 aa13.7□□□□□ -0.22
NEK1-201ENST00000439128 KDM5CP41229 1560 aa13.7□□□□□ -0.22
NEK1-201ENST00000439128 TESPA1A2RU30 521 aaPredicted RBP13.7□□□□□ -0.22
NEK1-201ENST00000439128 DHX32Q7L7V1 743 aaKnown RBP13.7□□□□□ -0.22
NEK1-201ENST00000439128 METTL13Q8N6R0 699 aa13.7□□□□□ -0.22
NEK1-201ENST00000439128 SLC10A4Q96EP9 437 aa13.7□□□□□ -0.22
NEK1-201ENST00000439128 TRPC6Q9Y210 931 aa13.7□□□□□ -0.22
NEK1-201ENST00000439128 CHL1O00533 1208 aa13.7□□□□□ -0.22
NEK1-201ENST00000439128 CCDC113Q9H0I3 377 aa13.7□□□□□ -0.22
NEK1-201ENST00000439128 DDX19AQ9NUU7 478 aaKnown RBP13.7□□□□□ -0.22
NEK1-201ENST00000439128 ADCY7P51828 1080 aa13.7□□□□□ -0.22
NEK1-201ENST00000439128 NLRX1Q86UT6 975 aa13.7□□□□□ -0.22
NEK1-201ENST00000439128 ARAP3Q8WWN8 1544 aa13.7□□□□□ -0.22
NEK1-201ENST00000439128 N4BP3O15049 544 aa13.69□□□□□ -0.22
NEK1-201ENST00000439128 IREB2P48200 963 aaKnown RBP13.69□□□□□ -0.22
NEK1-201ENST00000439128 SLC8A3P57103 927 aa13.69□□□□□ -0.22
NEK1-201ENST00000439128 KCTD2Q14681 263 aa13.69□□□□□ -0.22
NEK1-201ENST00000439128 CDAN1Q8IWY9 1227 aa13.69□□□□□ -0.22
NEK1-201ENST00000439128 RNF34Q969K3 372 aa13.69□□□□□ -0.22
NEK1-201ENST00000439128 GLT8D2Q9H1C3 349 aa13.69□□□□□ -0.22
NEK1-201ENST00000439128 PALLDQ8WX93 1383 aa13.69□□□□□ -0.22
NEK1-201ENST00000439128 ROBO2Q9HCK4 1378 aa13.69□□□□□ -0.22
NEK1-201ENST00000439128 ARHGEF35A5YM69 484 aa13.69□□□□□ -0.22
NEK1-201ENST00000439128 ZNF174Q15697 407 aa13.69□□□□□ -0.22
NEK1-201ENST00000439128 GNPTABQ3T906 1256 aa13.69□□□□□ -0.22
NEK1-201ENST00000439128 HACE1Q8IYU2 909 aa13.69□□□□□ -0.22
NEK1-201ENST00000439128 CEP83Q9Y592 693 aa13.69□□□□□ -0.22
NEK1-201ENST00000439128 MSANTD4Q8NCY6 345 aa13.69□□□□□ -0.22
NEK1-201ENST00000439128 PSMA7O14818 248 aa13.69□□□□□ -0.22
NEK1-201ENST00000439128 KIF5CO60282 957 aa13.69□□□□□ -0.22
NEK1-201ENST00000439128 BBOX1O75936 387 aa13.69□□□□□ -0.22
NEK1-201ENST00000439128 NPR1P16066 1061 aa13.69□□□□□ -0.22
NEK1-201ENST00000439128 TMC4Q7Z404 712 aa13.69□□□□□ -0.22
NEK1-201ENST00000439128 KCNG4Q8TDN1 519 aa13.69□□□□□ -0.22
NEK1-201ENST00000439128 CSPG5O95196 566 aa13.68□□□□□ -0.22
NEK1-201ENST00000439128 PDE4DQ08499 809 aa13.68□□□□□ -0.22
NEK1-201ENST00000439128 IL17REQ8NFR9 667 aa13.68□□□□□ -0.22
NEK1-201ENST00000439128 V9GY48 417 aaPredicted RBP13.68□□□□□ -0.22
NEK1-201ENST00000439128 INSRP06213 1382 aa13.68□□□□□ -0.22
NEK1-201ENST00000439128 STX1AQ16623 288 aa13.68□□□□□ -0.22
NEK1-201ENST00000439128 ARPP21Q9UBL0 812 aaPredicted RBP13.68□□□□□ -0.22
NEK1-201ENST00000439128 ERLIN1O75477 346 aa13.68□□□□□ -0.22
NEK1-201ENST00000439128 PCCAP05165 728 aaPredicted RBP13.68□□□□□ -0.22
NEK1-201ENST00000439128 ALS2CR12Q96Q35 445 aa13.68□□□□□ -0.22
NEK1-201ENST00000439128 CSRNP1Q96S65 589 aa13.68□□□□□ -0.22
NEK1-201ENST00000439128 TMX1Q9H3N1 280 aa13.68□□□□□ -0.22
NEK1-201ENST00000439128 EEF2P13639 858 aaKnown RBP13.68□□□□□ -0.22
NEK1-201ENST00000439128 TRPC3Q13507 836 aa13.68□□□□□ -0.22
NEK1-201ENST00000439128 NR1I2O75469 434 aa13.68□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 54 ms