RNA–Protein interactions for RNA: ENST00000437167.1

RGPD6-203, Transcript of RANBP2-like and GRIP domain containing 6, humanhuman

TSL 1 (best)

Gene RGPD6, Length 606 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RGPD6-203ENST00000437167 ABI1Q8IZP0 508 aa8.42□□□□□ -1.06
RGPD6-203ENST00000437167 EZH1Q92800 747 aaPredicted RBP8.42□□□□□ -1.06
RGPD6-203ENST00000437167 NIF3L1Q9GZT8 377 aa8.42□□□□□ -1.06
RGPD6-203ENST00000437167 FAM105AQ9NUU6 356 aa8.42□□□□□ -1.06
RGPD6-203ENST00000437167 DAGLAQ9Y4D2 1042 aa8.42□□□□□ -1.06
RGPD6-203ENST00000437167 MAPK1P28482 360 aa8.41□□□□□ -1.06
RGPD6-203ENST00000437167 MSMPQ1L6U9 139 aa8.41□□□□□ -1.06
RGPD6-203ENST00000437167 ASB16Q96NS5 453 aa8.41□□□□□ -1.06
RGPD6-203ENST00000437167 TRIM56Q9BRZ2 755 aaKnown RBP8.41□□□□□ -1.06
RGPD6-203ENST00000437167 CCDC39Q9UFE4 941 aa8.41□□□□□ -1.06
RGPD6-203ENST00000437167 KIR2DP1A0A0G2JNF4 349 aaPredicted RBP8.4□□□□□ -1.06
RGPD6-203ENST00000437167 EIF1AYO14602 144 aaKnown RBP8.4□□□□□ -1.06
RGPD6-203ENST00000437167 TREHO43280 583 aa8.4□□□□□ -1.06
RGPD6-203ENST00000437167 VSIG10LQ86VR7 867 aa8.4□□□□□ -1.06
RGPD6-203ENST00000437167 CCDC74AQ96AQ1 378 aa8.4□□□□□ -1.06
RGPD6-203ENST00000437167 ZC3H12CQ9C0D7 883 aaKnown RBP8.4□□□□□ -1.06
RGPD6-203ENST00000437167 SEMA6CQ9H3T2 930 aa8.4□□□□□ -1.06
RGPD6-203ENST00000437167 AOC2O75106 756 aa8.39□□□□□ -1.07
RGPD6-203ENST00000437167 ITPKAP23677 461 aa8.39□□□□□ -1.07
RGPD6-203ENST00000437167 CYP27A1Q02318 531 aa8.39□□□□□ -1.07
RGPD6-203ENST00000437167 ADGRE2Q9UHX3 823 aa8.39□□□□□ -1.07
RGPD6-203ENST00000437167 AP3B2Q13367 1082 aa8.38□□□□□ -1.07
RGPD6-203ENST00000437167 ZNF765Q7L2R6 523 aa8.38□□□□□ -1.07
RGPD6-203ENST00000437167 ZSCAN29Q8IWY8 852 aaPredicted RBP8.38□□□□□ -1.07
RGPD6-203ENST00000437167 FLCNQ8NFG4 579 aa8.38□□□□□ -1.07
RGPD6-203ENST00000437167 FBXL18Q96ME1 805 aa8.38□□□□□ -1.07
RGPD6-203ENST00000437167 DNAJC25Q9H1X3 360 aa8.38□□□□□ -1.07
RGPD6-203ENST00000437167 ACSS3Q9H6R3 686 aa8.38□□□□□ -1.07
RGPD6-203ENST00000437167 ABCB6Q9NP58 842 aa8.38□□□□□ -1.07
RGPD6-203ENST00000437167 BSDC1Q9NW68 430 aaPredicted RBP8.38□□□□□ -1.07
RGPD6-203ENST00000437167 TMEM238LA0A1B0GVL6 79 aa8.37□□□□□ -1.07
RGPD6-203ENST00000437167 ZBTB7CA1YPR0 619 aa8.37□□□□□ -1.07
RGPD6-203ENST00000437167 LIG1P18858 919 aa8.37□□□□□ -1.07
RGPD6-203ENST00000437167 PLCB3Q01970 1234 aa8.37□□□□□ -1.07
RGPD6-203ENST00000437167 TRIM26Q12899 539 aaPredicted RBP8.37□□□□□ -1.07
RGPD6-203ENST00000437167 DNAJC14Q6Y2X3 702 aaPredicted RBP8.37□□□□□ -1.07
RGPD6-203ENST00000437167 FMNL2Q96PY5 1086 aa8.37□□□□□ -1.07
RGPD6-203ENST00000437167 WDR18Q9BV38 432 aa8.37□□□□□ -1.07
RGPD6-203ENST00000437167 PIDD1Q9HB75 910 aa8.37□□□□□ -1.07
RGPD6-203ENST00000437167 TRAK1Q9UPV9 953 aa8.37□□□□□ -1.07
RGPD6-203ENST00000437167 DTHD1Q6ZMT9 781 aa8.36□□□□□ -1.07
RGPD6-203ENST00000437167 GATA6Q92908 595 aa8.36□□□□□ -1.07
RGPD6-203ENST00000437167 CSRNP1Q96S65 589 aa8.36□□□□□ -1.07
RGPD6-203ENST00000437167 PPP1R9AQ9ULJ8 1098 aa8.36□□□□□ -1.07
RGPD6-203ENST00000437167 DYNC1LI2O43237 492 aaPredicted RBP8.35□□□□□ -1.07
RGPD6-203ENST00000437167 PRNPP04156 253 aa8.35□□□□□ -1.07
RGPD6-203ENST00000437167 PTPN12Q05209 780 aaKnown RBP8.35□□□□□ -1.07
RGPD6-203ENST00000437167 FMR1Q06787 632 aaKnown RBP eCLIP8.35□□□□□ -1.07
RGPD6-203ENST00000437167 KRTAP19-1Q8IUB9 90 aa8.35□□□□□ -1.07
RGPD6-203ENST00000437167 EPS8L3Q8TE67 593 aaKnown RBP8.35□□□□□ -1.07
RGPD6-203ENST00000437167 ZC3H7BQ9UGR2 993 aaKnown RBP8.35□□□□□ -1.07
RGPD6-203ENST00000437167 GPN3Q9UHW5 284 aaPredicted RBP8.35□□□□□ -1.07
RGPD6-203ENST00000437167 SLFN14P0C7P3 912 aa8.34□□□□□ -1.07
RGPD6-203ENST00000437167 FCGRTP55899 365 aa8.34□□□□□ -1.07
RGPD6-203ENST00000437167 GRM2Q14416 872 aa8.34□□□□□ -1.07
RGPD6-203ENST00000437167 PRPF40BQ6NWY9 871 aaKnown RBP8.34□□□□□ -1.07
RGPD6-203ENST00000437167 CCDC86Q9H6F5 360 aaKnown RBP8.34□□□□□ -1.07
RGPD6-203ENST00000437167 NLRP2Q9NX02 1062 aa8.34□□□□□ -1.07
RGPD6-203ENST00000437167 PPP4R2Q9NY27 417 aa8.34□□□□□ -1.07
RGPD6-203ENST00000437167 RNGTTO60942 597 aaKnown RBP8.33□□□□□ -1.08
RGPD6-203ENST00000437167 HNRNPUQ00839 825 aaKnown RBP eCLIP8.33□□□□□ -1.08
RGPD6-203ENST00000437167 FAAP100Q0VG06 881 aa8.33□□□□□ -1.08
RGPD6-203ENST00000437167 COL19A1Q14993 1142 aa8.33□□□□□ -1.08
RGPD6-203ENST00000437167 ENOX2Q16206 610 aaKnown RBP8.33□□□□□ -1.08
RGPD6-203ENST00000437167 RPS26P11Q5JNZ5 115 aaPredicted RBP8.33□□□□□ -1.08
RGPD6-203ENST00000437167 KCNB2Q92953 911 aa8.33□□□□□ -1.08
RGPD6-203ENST00000437167 WDR89Q96FK6 387 aaPredicted RBP8.33□□□□□ -1.08
RGPD6-203ENST00000437167 C1GALT1Q9NS00 363 aa8.33□□□□□ -1.08
RGPD6-203ENST00000437167 ANKRD33BA6NCL7 494 aa8.32□□□□□ -1.08
RGPD6-203ENST00000437167 BTBD11A6QL63 1104 aa8.32□□□□□ -1.08
RGPD6-203ENST00000437167 TMPRSS2O15393 492 aa8.32□□□□□ -1.08
RGPD6-203ENST00000437167 YBX3P16989 372 aaKnown RBP eCLIP8.32□□□□□ -1.08
RGPD6-203ENST00000437167 PPP2R3AQ06190 1150 aa8.32□□□□□ -1.08
RGPD6-203ENST00000437167 CCDC27Q2M243 656 aa8.32□□□□□ -1.08
RGPD6-203ENST00000437167 CYP27C1Q4G0S4 372 aa8.32□□□□□ -1.08
RGPD6-203ENST00000437167 OGFOD3Q6PK18 319 aa8.32□□□□□ -1.08
RGPD6-203ENST00000437167 AGBL5Q8NDL9 886 aa8.32□□□□□ -1.08
RGPD6-203ENST00000437167 GSX1Q9H4S2 264 aaPredicted RBP8.32□□□□□ -1.08
RGPD6-203ENST00000437167 GSTP1P09211 210 aaKnown RBP8.31□□□□□ -1.08
RGPD6-203ENST00000437167 ID3Q02535 119 aa8.31□□□□□ -1.08
RGPD6-203ENST00000437167 CDK5R2Q13319 367 aa8.31□□□□□ -1.08
RGPD6-203ENST00000437167 SEZ6L2Q6UXD5 910 aa8.31□□□□□ -1.08
RGPD6-203ENST00000437167 ATXN3LQ9H3M9 355 aa8.31□□□□□ -1.08
RGPD6-203ENST00000437167 FAM87AP0C7U9 286 aa8.3□□□□□ -1.08
RGPD6-203ENST00000437167 PI16Q6UXB8 463 aa8.3□□□□□ -1.08
RGPD6-203ENST00000437167 NFXL1Q6ZNB6 911 aa8.3□□□□□ -1.08
RGPD6-203ENST00000437167 NPAS4Q8IUM7 802 aa8.3□□□□□ -1.08
RGPD6-203ENST00000437167 GLIS3Q8NEA6 775 aa8.3□□□□□ -1.08
RGPD6-203ENST00000437167 FANCD2OSQ96PS1 177 aa8.3□□□□□ -1.08
RGPD6-203ENST00000437167 CRIM1Q9NZV1 1036 aa8.3□□□□□ -1.08
RGPD6-203ENST00000437167 SLC5A6Q9Y289 635 aa8.3□□□□□ -1.08
RGPD6-203ENST00000437167 AKAP2Q9Y2D5 859 aa8.3□□□□□ -1.08
RGPD6-203ENST00000437167 P4HBP07237 508 aaKnown RBP8.29□□□□□ -1.08
RGPD6-203ENST00000437167 SMYD4Q8IYR2 804 aaPredicted RBP8.29□□□□□ -1.08
RGPD6-203ENST00000437167 SSU72Q9NP77 194 aaKnown RBP8.29□□□□□ -1.08
RGPD6-203ENST00000437167 PAK6Q9NQU5 681 aaPredicted RBP8.29□□□□□ -1.08
RGPD6-203ENST00000437167 TMEM39AQ9NV64 488 aa8.29□□□□□ -1.08
RGPD6-203ENST00000437167 SYNGAP1Q96PV0 1343 aa8.29□□□□□ -1.08
RGPD6-203ENST00000437167 PNMA6FA0A0J9YX94 578 aa8.28□□□□□ -1.08
RGPD6-203ENST00000437167 ZNF862O60290 1169 aa8.28□□□□□ -1.08
Retrieved 100 of 20,778 RNA–protein pairs in 15.1 ms