RNA–Protein interactions for RNA: ENST00000436140.2

LINC01516-201, Transcript of long intergenic non-protein coding RNA 1516, humanhuman

TSL 5 BASIC

Gene LINC01516, Length 2,992 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01516-201ENST00000436140 FAM47AQ5JRC9 791 aa12.85□□□□□ -0.35
LINC01516-201ENST00000436140 IFFO2Q5TF58 517 aa12.85□□□□□ -0.35
LINC01516-201ENST00000436140 NSUN4Q96CB9 384 aaKnown RBP12.85□□□□□ -0.35
LINC01516-201ENST00000436140 AIFM3Q96NN9 605 aa12.85□□□□□ -0.35
LINC01516-201ENST00000436140 CD209Q9NNX6 404 aa12.85□□□□□ -0.35
LINC01516-201ENST00000436140 C4BP0C0L5 1744 aa12.85□□□□□ -0.35
LINC01516-201ENST00000436140 COL1A1P02452 1464 aaPredicted RBP12.85□□□□□ -0.35
LINC01516-201ENST00000436140 DDX11L8A8MPP1 907 aa12.84□□□□□ -0.35
LINC01516-201ENST00000436140 PPEF1O14829 653 aaPredicted RBP12.84□□□□□ -0.35
LINC01516-201ENST00000436140 USP17L8P0C7I0 530 aa12.84□□□□□ -0.35
LINC01516-201ENST00000436140 EXOSC10Q01780 885 aaKnown RBP12.84□□□□□ -0.35
LINC01516-201ENST00000436140 MFSD6Q6ZSS7 791 aa12.84□□□□□ -0.35
LINC01516-201ENST00000436140 PHKBQ93100 1093 aa12.84□□□□□ -0.35
LINC01516-201ENST00000436140 NACAP1Q9BZK3 213 aa12.84□□□□□ -0.35
LINC01516-201ENST00000436140 ZC3H12CQ9C0D7 883 aaKnown RBP12.84□□□□□ -0.35
LINC01516-201ENST00000436140 SH2B1Q9NRF2 756 aaPredicted RBP12.84□□□□□ -0.35
LINC01516-201ENST00000436140 STK32BQ9NY57 414 aa12.84□□□□□ -0.35
LINC01516-201ENST00000436140 LDHBP07195 334 aaKnown RBP12.84□□□□□ -0.35
LINC01516-201ENST00000436140 SRGNP10124 158 aa12.84□□□□□ -0.35
LINC01516-201ENST00000436140 TSGA10IPQ3SY00 556 aa12.84□□□□□ -0.35
LINC01516-201ENST00000436140 MFSD14BQ5SR56 506 aa12.84□□□□□ -0.35
LINC01516-201ENST00000436140 RTL9Q8NET4 1388 aa12.84□□□□□ -0.35
LINC01516-201ENST00000436140 CPLX1O14810 134 aa12.84□□□□□ -0.35
LINC01516-201ENST00000436140 NMT2O60551 498 aa12.84□□□□□ -0.35
LINC01516-201ENST00000436140 ZSCAN22P10073 491 aaPredicted RBP12.84□□□□□ -0.35
LINC01516-201ENST00000436140 TMEM67Q5HYA8 995 aa12.84□□□□□ -0.35
LINC01516-201ENST00000436140 MAPKAPK5Q8IW41 473 aa12.84□□□□□ -0.35
LINC01516-201ENST00000436140 MCM9Q9NXL9 1143 aa12.84□□□□□ -0.35
LINC01516-201ENST00000436140 MYO5AQ9Y4I1 1855 aaKnown RBP12.83□□□□□ -0.35
LINC01516-201ENST00000436140 DPP8Q6V1X1 898 aaPredicted RBP12.83□□□□□ -0.36
LINC01516-201ENST00000436140 USP48Q86UV5 1035 aa12.83□□□□□ -0.36
LINC01516-201ENST00000436140 TGFBRAP1Q8WUH2 860 aa12.83□□□□□ -0.36
LINC01516-201ENST00000436140 DYNLL2Q96FJ2 89 aa12.83□□□□□ -0.36
LINC01516-201ENST00000436140 MTMR6Q9Y217 621 aa12.83□□□□□ -0.36
LINC01516-201ENST00000436140 WDR33Q9C0J8 1336 aaKnown RBP12.83□□□□□ -0.36
LINC01516-201ENST00000436140 PTPDC1A2A3K4 754 aa12.83□□□□□ -0.36
LINC01516-201ENST00000436140 USP5P45974 858 aa12.83□□□□□ -0.36
LINC01516-201ENST00000436140 PICALMQ13492 652 aa12.83□□□□□ -0.36
LINC01516-201ENST00000436140 MPNDQ8N594 471 aa12.83□□□□□ -0.36
LINC01516-201ENST00000436140 GTF3C6Q969F1 213 aa12.83□□□□□ -0.36
LINC01516-201ENST00000436140 FTOQ9C0B1 505 aaKnown RBP eCLIP12.83□□□□□ -0.36
LINC01516-201ENST00000436140 LMBRD1Q9NUN5 540 aa12.83□□□□□ -0.36
LINC01516-201ENST00000436140 SPEF2Q9C093 1822 aa12.83□□□□□ -0.36
LINC01516-201ENST00000436140 MYH3P11055 1940 aa12.82□□□□□ -0.36
LINC01516-201ENST00000436140 BBOX1O75936 387 aa12.82□□□□□ -0.36
LINC01516-201ENST00000436140 CTDNEP1O95476 244 aa12.82□□□□□ -0.36
LINC01516-201ENST00000436140 CRY2Q49AN0 593 aa12.82□□□□□ -0.36
LINC01516-201ENST00000436140 ZNF804AQ7Z570 1209 aa12.82□□□□□ -0.36
LINC01516-201ENST00000436140 MB21D2Q8IYB1 491 aaPredicted RBP12.82□□□□□ -0.36
LINC01516-201ENST00000436140 SLC44A5Q8NCS7 719 aa12.82□□□□□ -0.36
LINC01516-201ENST00000436140 SH3RF3Q8TEJ3 882 aaPredicted RBP12.82□□□□□ -0.36
LINC01516-201ENST00000436140 BRIP1Q9BX63 1249 aa12.82□□□□□ -0.36
LINC01516-201ENST00000436140 TMX4Q9H1E5 349 aaPredicted RBP12.82□□□□□ -0.36
LINC01516-201ENST00000436140 C21orf2O43822 256 aa12.82□□□□□ -0.36
LINC01516-201ENST00000436140 PPARAQ07869 468 aa12.82□□□□□ -0.36
LINC01516-201ENST00000436140 CAMKK2Q96RR4 588 aa12.82□□□□□ -0.36
LINC01516-201ENST00000436140 RIOK1Q9BRS2 568 aaKnown RBP12.82□□□□□ -0.36
LINC01516-201ENST00000436140 PCDHAC2Q9Y5I4 1007 aa12.82□□□□□ -0.36
LINC01516-201ENST00000436140 ANKRD36CQ5JPF3 1778 aa12.82□□□□□ -0.36
LINC01516-201ENST00000436140 F13A1P00488 732 aa12.81□□□□□ -0.36
LINC01516-201ENST00000436140 POLR3DP05423 398 aaPredicted RBP12.81□□□□□ -0.36
LINC01516-201ENST00000436140 HMGB1P09429 215 aaKnown RBP12.81□□□□□ -0.36
LINC01516-201ENST00000436140 LEMD3Q9Y2U8 911 aa12.81□□□□□ -0.36
LINC01516-201ENST00000436140 NHSQ6T4R5 1651 aa12.81□□□□□ -0.36
LINC01516-201ENST00000436140 COL5A3P25940 1745 aaPredicted RBP12.81□□□□□ -0.36
LINC01516-201ENST00000436140 CACNB3P54284 484 aa12.81□□□□□ -0.36
LINC01516-201ENST00000436140 AKNAD1Q5T1N1 836 aa12.81□□□□□ -0.36
LINC01516-201ENST00000436140 GPT2Q8TD30 523 aa12.81□□□□□ -0.36
LINC01516-201ENST00000436140 H0YIN7 160 aa12.81□□□□□ -0.36
LINC01516-201ENST00000436140 FBXO41Q8TF61 875 aa12.81□□□□□ -0.36
LINC01516-201ENST00000436140 IL17RAQ96F46 866 aa12.81□□□□□ -0.36
LINC01516-201ENST00000436140 DDX60Q8IY21 1712 aaKnown RBP12.8□□□□□ -0.36
LINC01516-201ENST00000436140 RBM5P52756 815 aaKnown RBP eCLIP12.8□□□□□ -0.36
LINC01516-201ENST00000436140 KIAA0825Q8IV33 1275 aa12.8□□□□□ -0.36
LINC01516-201ENST00000436140 SCAF8Q9UPN6 1271 aaKnown RBP12.8□□□□□ -0.36
LINC01516-201ENST00000436140 SBF2Q86WG5 1849 aa12.8□□□□□ -0.36
LINC01516-201ENST00000436140 PSDA5PKW4 1024 aaPredicted RBP12.8□□□□□ -0.36
LINC01516-201ENST00000436140 GAS2L3Q86XJ1 694 aa12.8□□□□□ -0.36
LINC01516-201ENST00000436140 NSUN7Q8NE18 718 aaKnown RBP12.8□□□□□ -0.36
LINC01516-201ENST00000436140 TDRD7Q8NHU6 1098 aaKnown RBP12.8□□□□□ -0.36
LINC01516-201ENST00000436140 RFX7Q2KHR2 1363 aa12.8□□□□□ -0.36
LINC01516-201ENST00000436140 AKAP11Q9UKA4 1901 aa12.8□□□□□ -0.36
LINC01516-201ENST00000436140 CDC27P30260 824 aa12.79□□□□□ -0.36
LINC01516-201ENST00000436140 CTR9Q6PD62 1173 aa12.79□□□□□ -0.36
LINC01516-201ENST00000436140 BAZ2BQ9UIF8 2168 aaKnown RBP12.79□□□□□ -0.36
LINC01516-201ENST00000436140 ATP2B1P20020 1258 aa12.79□□□□□ -0.36
LINC01516-201ENST00000436140 ATP2B4P23634 1241 aa12.79□□□□□ -0.36
LINC01516-201ENST00000436140 PDE6BP35913 854 aa12.79□□□□□ -0.36
LINC01516-201ENST00000436140 BAG6P46379 1132 aa12.79□□□□□ -0.36
LINC01516-201ENST00000436140 DCP1AQ9NPI6 582 aaPredicted RBP12.79□□□□□ -0.36
LINC01516-201ENST00000436140 ORC3Q9UBD5 711 aaPredicted RBP12.79□□□□□ -0.36
LINC01516-201ENST00000436140 ANGEL1Q9UNK9 670 aaKnown RBP12.79□□□□□ -0.36
LINC01516-201ENST00000436140 CCDC69A6NI79 296 aa12.78□□□□□ -0.36
LINC01516-201ENST00000436140 PFKFB2O60825 505 aa12.78□□□□□ -0.36
LINC01516-201ENST00000436140 METAP2P50579 478 aaKnown RBP eCLIP12.78□□□□□ -0.36
LINC01516-201ENST00000436140 UBAC1Q9BSL1 405 aa12.78□□□□□ -0.36
LINC01516-201ENST00000436140 PANK2Q9BZ23 570 aa12.78□□□□□ -0.36
LINC01516-201ENST00000436140 SLC12A7Q9Y666 1083 aa12.78□□□□□ -0.36
LINC01516-201ENST00000436140 NPR1P16066 1061 aa12.78□□□□□ -0.36
LINC01516-201ENST00000436140 BTDP43251 543 aa12.78□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 20 ms