RNA–Protein interactions for RNA: ENST00000435607.3

SCN4A-201, Transcript of sodium voltage-gated channel alpha subunit 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SCN4A, Length 7,805 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCN4A-201ENST00000435607 GRM8O00222 908 aa12.51□□□□□ -0.41
SCN4A-201ENST00000435607 GNPATO15228 680 aa12.51□□□□□ -0.41
SCN4A-201ENST00000435607 SEPT10Q9P0V9 454 aa12.51□□□□□ -0.41
SCN4A-201ENST00000435607 TNFAIP3P21580 790 aa12.51□□□□□ -0.41
SCN4A-201ENST00000435607 MCM7P33993 719 aa12.51□□□□□ -0.41
SCN4A-201ENST00000435607 SLFN5Q08AF3 891 aa12.51□□□□□ -0.41
SCN4A-201ENST00000435607 HAUS8Q9BT25 410 aa12.51□□□□□ -0.41
SCN4A-201ENST00000435607 MGEA5O60502 916 aa12.51□□□□□ -0.41
SCN4A-201ENST00000435607 MYCLP12524 364 aaPredicted RBP12.51□□□□□ -0.41
SCN4A-201ENST00000435607 MARCKSP29966 332 aaPredicted RBP12.51□□□□□ -0.41
SCN4A-201ENST00000435607 MNAT1P51948 309 aa12.51□□□□□ -0.41
SCN4A-201ENST00000435607 SSH1Q8WYL5 1049 aa12.51□□□□□ -0.41
SCN4A-201ENST00000435607 MRPS27Q92552 414 aaKnown RBP12.51□□□□□ -0.41
SCN4A-201ENST00000435607 DHX58Q96C10 678 aa12.51□□□□□ -0.41
SCN4A-201ENST00000435607 C10orf67Q8IYJ2 551 aa12.51□□□□□ -0.41
SCN4A-201ENST00000435607 NKTRP30414 1462 aaKnown RBP12.51□□□□□ -0.41
SCN4A-201ENST00000435607 ACTN4O43707 911 aaKnown RBP12.51□□□□□ -0.41
SCN4A-201ENST00000435607 PLCD1P51178 756 aa12.51□□□□□ -0.41
SCN4A-201ENST00000435607 GGA1Q9UJY5 639 aa12.51□□□□□ -0.41
SCN4A-201ENST00000435607 PPP2R5CQ13362 524 aa12.5□□□□□ -0.41
SCN4A-201ENST00000435607 CEP120Q8N960 986 aa12.5□□□□□ -0.41
SCN4A-201ENST00000435607 IQUBQ8NA54 791 aa12.5□□□□□ -0.41
SCN4A-201ENST00000435607 XAGE3Q8WTP9 111 aa12.5□□□□□ -0.41
SCN4A-201ENST00000435607 ZNF365Q70YC5 407 aa12.5□□□□□ -0.41
SCN4A-201ENST00000435607 CDC37L1Q7L3B6 337 aa12.5□□□□□ -0.41
SCN4A-201ENST00000435607 SRRTQ9BXP5 876 aaKnown RBP12.5□□□□□ -0.41
SCN4A-201ENST00000435607 BACH2Q9BYV9 841 aa12.5□□□□□ -0.41
SCN4A-201ENST00000435607 PAG1Q9NWQ8 432 aa12.5□□□□□ -0.41
SCN4A-201ENST00000435607 PKD2L1Q9P0L9 805 aa12.5□□□□□ -0.41
SCN4A-201ENST00000435607 TUBBP07437 444 aa12.5□□□□□ -0.41
SCN4A-201ENST00000435607 DCUN1D2Q6PH85 259 aa12.5□□□□□ -0.41
SCN4A-201ENST00000435607 OTUD6AQ7L8S5 288 aa12.5□□□□□ -0.41
SCN4A-201ENST00000435607 WDR66Q8TBY9 1149 aa12.5□□□□□ -0.41
SCN4A-201ENST00000435607 HVCN1Q96D96 273 aa12.5□□□□□ -0.41
SCN4A-201ENST00000435607 ZSWIM4Q9H7M6 989 aa12.5□□□□□ -0.41
SCN4A-201ENST00000435607 IRS4O14654 1257 aaPredicted RBP12.5□□□□□ -0.41
SCN4A-201ENST00000435607 ATF7P17544 494 aaPredicted RBP12.5□□□□□ -0.41
SCN4A-201ENST00000435607 ALDH1L1O75891 902 aa12.49□□□□□ -0.41
SCN4A-201ENST00000435607 UFL1O94874 794 aa12.49□□□□□ -0.41
SCN4A-201ENST00000435607 PPP2R5DQ14738 602 aa12.49□□□□□ -0.41
SCN4A-201ENST00000435607 CFTRP13569 1480 aa12.49□□□□□ -0.41
SCN4A-201ENST00000435607 ALDH1B1P30837 517 aa12.49□□□□□ -0.41
SCN4A-201ENST00000435607 LACTBP83111 547 aaPredicted RBP12.49□□□□□ -0.41
SCN4A-201ENST00000435607 RPS6KA2Q15349 733 aa12.49□□□□□ -0.41
SCN4A-201ENST00000435607 BCAP29Q9UHQ4 241 aa12.49□□□□□ -0.41
SCN4A-201ENST00000435607 TTLL3Q9Y4R7 772 aa12.49□□□□□ -0.41
SCN4A-201ENST00000435607 XPAP23025 273 aaPredicted RBP12.49□□□□□ -0.41
SCN4A-201ENST00000435607 POLR2BP30876 1174 aaKnown RBP12.49□□□□□ -0.41
SCN4A-201ENST00000435607 CNNM4Q6P4Q7 775 aa12.49□□□□□ -0.41
SCN4A-201ENST00000435607 BRF1Q92994 677 aa12.49□□□□□ -0.41
SCN4A-201ENST00000435607 TPCN1Q9ULQ1 816 aa12.49□□□□□ -0.41
SCN4A-201ENST00000435607 ANO3Q9BYT9 981 aa12.49□□□□□ -0.41
SCN4A-201ENST00000435607 DPP8Q6V1X1 898 aaPredicted RBP12.49□□□□□ -0.41
SCN4A-201ENST00000435607 MED10Q9BTT4 135 aa12.49□□□□□ -0.41
SCN4A-201ENST00000435607 PNMA2Q9UL42 364 aa12.49□□□□□ -0.41
SCN4A-201ENST00000435607 KIF14Q15058 1648 aa12.49□□□□□ -0.41
SCN4A-201ENST00000435607 ADCY5O95622 1261 aa12.49□□□□□ -0.41
SCN4A-201ENST00000435607 CASC4Q6P4E1 433 aa12.49□□□□□ -0.41
SCN4A-201ENST00000435607 COPS6Q7L5N1 327 aa12.49□□□□□ -0.41
SCN4A-201ENST00000435607 RAD50Q92878 1312 aa12.49□□□□□ -0.41
SCN4A-201ENST00000435607 ADGRL1O94910 1474 aa12.48□□□□□ -0.41
SCN4A-201ENST00000435607 AKAP4Q5JQC9 854 aa12.48□□□□□ -0.41
SCN4A-201ENST00000435607 IPO4Q8TEX9 1081 aaKnown RBP12.48□□□□□ -0.41
SCN4A-201ENST00000435607 RRP9O43818 475 aaKnown RBP12.48□□□□□ -0.41
SCN4A-201ENST00000435607 FCHSD1Q86WN1 690 aa12.48□□□□□ -0.41
SCN4A-201ENST00000435607 NEDD9Q14511 834 aa12.48□□□□□ -0.41
SCN4A-201ENST00000435607 GNPTABQ3T906 1256 aa12.48□□□□□ -0.41
SCN4A-201ENST00000435607 PDZD4Q76G19 769 aaPredicted RBP12.48□□□□□ -0.41
SCN4A-201ENST00000435607 SMIM23A6NLE4 172 aa12.48□□□□□ -0.41
SCN4A-201ENST00000435607 TRAF5O00463 557 aa12.48□□□□□ -0.41
SCN4A-201ENST00000435607 GTF2F1P35269 517 aaKnown RBP eCLIP12.48□□□□□ -0.41
SCN4A-201ENST00000435607 CROCCP2Q86T23 111 aa12.48□□□□□ -0.41
SCN4A-201ENST00000435607 TRPC6Q9Y210 931 aa12.48□□□□□ -0.41
SCN4A-201ENST00000435607 PARP10Q53GL7 1025 aa12.48□□□□□ -0.41
SCN4A-201ENST00000435607 ABI1Q8IZP0 508 aa12.48□□□□□ -0.41
SCN4A-201ENST00000435607 CACNA2D3Q8IZS8 1091 aa12.48□□□□□ -0.41
SCN4A-201ENST00000435607 IPO11Q9UI26 975 aaKnown RBP12.48□□□□□ -0.41
SCN4A-201ENST00000435607 PPFIA2O75334 1257 aa12.48□□□□□ -0.41
SCN4A-201ENST00000435607 STMN1P16949 149 aa12.48□□□□□ -0.41
SCN4A-201ENST00000435607 PKNOX2Q96KN3 472 aa12.48□□□□□ -0.41
SCN4A-201ENST00000435607 ABL1P00519 1130 aa12.47□□□□□ -0.41
SCN4A-201ENST00000435607 KRT19P08727 400 aa12.47□□□□□ -0.41
SCN4A-201ENST00000435607 KRT10P13645 584 aa12.47□□□□□ -0.41
SCN4A-201ENST00000435607 CCNL1Q9UK58 526 aaPredicted RBP12.47□□□□□ -0.41
SCN4A-201ENST00000435607 LUC7L2Q9Y383 392 aaKnown RBP12.47□□□□□ -0.41
SCN4A-201ENST00000435607 ARHGAP24Q8N264 748 aa12.47□□□□□ -0.41
SCN4A-201ENST00000435607 GPCPD1Q9NPB8 672 aa12.47□□□□□ -0.41
SCN4A-201ENST00000435607 I3L4J1 428 aa12.47□□□□□ -0.41
SCN4A-201ENST00000435607 LMBR1LQ6UX01 489 aa12.47□□□□□ -0.41
SCN4A-201ENST00000435607 SEPT14Q6ZU15 432 aa12.47□□□□□ -0.41
SCN4A-201ENST00000435607 MIS12Q9H081 205 aa12.47□□□□□ -0.41
SCN4A-201ENST00000435607 IRAK4Q9NWZ3 460 aa12.47□□□□□ -0.41
SCN4A-201ENST00000435607 UTP11Q9Y3A2 253 aaKnown RBP12.47□□□□□ -0.41
SCN4A-201ENST00000435607 TLDC2A0PJX2 215 aa12.47□□□□□ -0.41
SCN4A-201ENST00000435607 CHMP2AO43633 222 aa12.47□□□□□ -0.41
SCN4A-201ENST00000435607 DCAF15Q66K64 600 aa12.47□□□□□ -0.41
SCN4A-201ENST00000435607 BCRP11274 1271 aa12.47□□□□□ -0.41
SCN4A-201ENST00000435607 IRX5P78411 483 aaPredicted RBP12.47□□□□□ -0.41
SCN4A-201ENST00000435607 Q6ZUG5 572 aa12.47□□□□□ -0.41
SCN4A-201ENST00000435607 NLRX1Q86UT6 975 aa12.47□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 14.1 ms