RNA–Protein interactions for RNA: ENST00000435201.5

LIMK1-203, Transcript of LIM domain kinase 1, humanhuman

TSL 1 (best)

Gene LIMK1, Length 1,883 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIMK1-203ENST00000435201 CCDC73Q6ZRK6 1079 aa19.5■□□□□ 0.71
LIMK1-203ENST00000435201 RAB11FIP4Q86YS3 637 aa19.5■□□□□ 0.71
LIMK1-203ENST00000435201 CCAR1Q8IX12 1150 aaKnown RBP19.5■□□□□ 0.71
LIMK1-203ENST00000435201 SETDB2Q96T68 719 aa19.5■□□□□ 0.71
LIMK1-203ENST00000435201 MTA3Q9BTC8 594 aa19.5■□□□□ 0.71
LIMK1-203ENST00000435201 MINPP1Q9UNW1 487 aa19.5■□□□□ 0.71
LIMK1-203ENST00000435201 SASS6Q6UVJ0 657 aa19.5■□□□□ 0.71
LIMK1-203ENST00000435201 NFXL1Q6ZNB6 911 aa19.5■□□□□ 0.71
LIMK1-203ENST00000435201 CKAP2LQ8IYA6 745 aa19.5■□□□□ 0.71
LIMK1-203ENST00000435201 FTOQ9C0B1 505 aaKnown RBP eCLIP19.5■□□□□ 0.71
LIMK1-203ENST00000435201 RNF41Q9H4P4 317 aaPredicted RBP19.5■□□□□ 0.71
LIMK1-203ENST00000435201 EIF2AK3Q9NZJ5 1116 aaKnown RBP19.5■□□□□ 0.71
LIMK1-203ENST00000435201 USP21Q9UK80 565 aa19.5■□□□□ 0.71
LIMK1-203ENST00000435201 SPATA31A6Q5VVP1 1343 aa19.49■□□□□ 0.71
LIMK1-203ENST00000435201 NID2Q14112 1375 aa19.49■□□□□ 0.71
LIMK1-203ENST00000435201 ZPR1O75312 459 aa19.49■□□□□ 0.71
LIMK1-203ENST00000435201 CAVIN2O95810 425 aa19.49■□□□□ 0.71
LIMK1-203ENST00000435201 CYP7A1P22680 504 aa19.49■□□□□ 0.71
LIMK1-203ENST00000435201 GYG1P46976 350 aa19.49■□□□□ 0.71
LIMK1-203ENST00000435201 KCNQ4P56696 695 aa19.49■□□□□ 0.71
LIMK1-203ENST00000435201 CTDSPL2Q05D32 466 aa19.49■□□□□ 0.71
LIMK1-203ENST00000435201 NKX2-3Q8TAU0 364 aa19.49■□□□□ 0.71
LIMK1-203ENST00000435201 ECM29Q5VYK3 1845 aa19.49■□□□□ 0.71
LIMK1-203ENST00000435201 LY75O60449 1722 aa19.49■□□□□ 0.71
LIMK1-203ENST00000435201 IFIT3O14879 490 aaKnown RBP19.48■□□□□ 0.71
LIMK1-203ENST00000435201 SEMA3EO15041 775 aa19.48■□□□□ 0.71
LIMK1-203ENST00000435201 PRKAB2O43741 272 aa19.48■□□□□ 0.71
LIMK1-203ENST00000435201 YEATS4O95619 227 aa19.48■□□□□ 0.71
LIMK1-203ENST00000435201 ME1P48163 572 aa19.48■□□□□ 0.71
LIMK1-203ENST00000435201 SART3Q15020 963 aaKnown RBP19.48■□□□□ 0.71
LIMK1-203ENST00000435201 VPS37DQ86XT2 251 aa19.48■□□□□ 0.71
LIMK1-203ENST00000435201 NLRP3Q96P20 1036 aa19.48■□□□□ 0.71
LIMK1-203ENST00000435201 POLR3EQ9NVU0 708 aa19.48■□□□□ 0.71
LIMK1-203ENST00000435201 COL1A1P02452 1464 aaPredicted RBP19.48■□□□□ 0.71
LIMK1-203ENST00000435201 TAF1LQ8IZX4 1826 aa19.48■□□□□ 0.71
LIMK1-203ENST00000435201 CACNA1SQ13698 1873 aa19.48■□□□□ 0.71
LIMK1-203ENST00000435201 CCDC69A6NI79 296 aa19.48■□□□□ 0.71
LIMK1-203ENST00000435201 GOLGA8AA7E2F4 631 aa19.48■□□□□ 0.71
LIMK1-203ENST00000435201 GNPATO15228 680 aa19.48■□□□□ 0.71
LIMK1-203ENST00000435201 FAM160A1Q05DH4 1040 aa19.48■□□□□ 0.71
LIMK1-203ENST00000435201 OTUD7BQ6GQQ9 843 aa19.48■□□□□ 0.71
LIMK1-203ENST00000435201 MICU3Q86XE3 530 aa19.48■□□□□ 0.71
LIMK1-203ENST00000435201 NBPF5PQ86XG9 351 aaPredicted RBP19.48■□□□□ 0.71
LIMK1-203ENST00000435201 KCNG4Q8TDN1 519 aa19.48■□□□□ 0.71
LIMK1-203ENST00000435201 CELF1Q92879 486 aaKnown RBP19.48■□□□□ 0.71
LIMK1-203ENST00000435201 RAI14Q9P0K7 980 aa19.48■□□□□ 0.71
LIMK1-203ENST00000435201 ZSWIM5Q9P217 1185 aa19.48■□□□□ 0.71
LIMK1-203ENST00000435201 CCNL1Q9UK58 526 aaPredicted RBP19.48■□□□□ 0.71
LIMK1-203ENST00000435201 RTCBQ9Y3I0 505 aaKnown RBP19.48■□□□□ 0.71
LIMK1-203ENST00000435201 SLC12A7Q9Y666 1083 aa19.48■□□□□ 0.71
LIMK1-203ENST00000435201 MYH13Q9UKX3 1938 aa19.47■□□□□ 0.71
LIMK1-203ENST00000435201 MAGEB6P1A0A0J9YX57 407 aa19.47■□□□□ 0.71
LIMK1-203ENST00000435201 KIF23Q02241 960 aaPredicted RBP19.47■□□□□ 0.71
LIMK1-203ENST00000435201 MYSM1Q5VVJ2 828 aa19.47■□□□□ 0.71
LIMK1-203ENST00000435201 SYNE3Q6ZMZ3 975 aa19.47■□□□□ 0.71
LIMK1-203ENST00000435201 PTF1AQ7RTS3 328 aa19.47■□□□□ 0.71
LIMK1-203ENST00000435201 MIGA1Q8NAN2 632 aa19.47■□□□□ 0.71
LIMK1-203ENST00000435201 ALG1Q9BT22 464 aa19.47■□□□□ 0.71
LIMK1-203ENST00000435201 ANKRD2Q9GZV1 360 aa19.47■□□□□ 0.71
LIMK1-203ENST00000435201 ABCF2Q9UG63 623 aa19.47■□□□□ 0.71
LIMK1-203ENST00000435201 IQSEC3Q9UPP2 1182 aaPredicted RBP19.47■□□□□ 0.71
LIMK1-203ENST00000435201 PDS5AQ29RF7 1337 aaKnown RBP19.47■□□□□ 0.71
LIMK1-203ENST00000435201 STK36Q9NRP7 1315 aa19.47■□□□□ 0.71
LIMK1-203ENST00000435201 A0A1W2PQ27 194 aa19.46■□□□□ 0.71
LIMK1-203ENST00000435201 A0A1W2PQ64 194 aa19.46■□□□□ 0.71
LIMK1-203ENST00000435201 A0A1W2PQD8 194 aa19.46■□□□□ 0.71
LIMK1-203ENST00000435201 KINO60870 393 aaKnown RBP19.46■□□□□ 0.71
LIMK1-203ENST00000435201 RPS8P62241 208 aaKnown RBP19.46■□□□□ 0.71
LIMK1-203ENST00000435201 STK38Q15208 465 aa19.46■□□□□ 0.71
LIMK1-203ENST00000435201 ANO6Q4KMQ2 910 aa19.46■□□□□ 0.71
LIMK1-203ENST00000435201 ADALQ6DHV7 355 aa19.46■□□□□ 0.71
LIMK1-203ENST00000435201 TPTE2Q6XPS3 522 aa19.46■□□□□ 0.71
LIMK1-203ENST00000435201 CDC27P30260 824 aa19.45■□□□□ 0.7
LIMK1-203ENST00000435201 LINC00301Q8NCQ3 95 aa19.45■□□□□ 0.7
LIMK1-203ENST00000435201 MRPS27Q92552 414 aaKnown RBP19.45■□□□□ 0.7
LIMK1-203ENST00000435201 FAM84BQ96KN1 310 aaPredicted RBP19.45■□□□□ 0.7
LIMK1-203ENST00000435201 GOLPH3LQ9H4A5 285 aa19.45■□□□□ 0.7
LIMK1-203ENST00000435201 SENP2Q9HC62 589 aa19.45■□□□□ 0.7
LIMK1-203ENST00000435201 SRP68Q9UHB9 627 aaKnown RBP19.45■□□□□ 0.7
LIMK1-203ENST00000435201 ERICH2A1L162 156 aa19.45■□□□□ 0.7
LIMK1-203ENST00000435201 IARSP41252 1262 aaKnown RBP19.45■□□□□ 0.7
LIMK1-203ENST00000435201 RCAN1P53805 252 aa19.45■□□□□ 0.7
LIMK1-203ENST00000435201 PPARAQ07869 468 aa19.45■□□□□ 0.7
LIMK1-203ENST00000435201 SNW1Q13573 536 aaKnown RBP19.45■□□□□ 0.7
LIMK1-203ENST00000435201 SF3A1Q15459 793 aaKnown RBP19.45■□□□□ 0.7
LIMK1-203ENST00000435201 NTRK3Q16288 839 aa19.45■□□□□ 0.7
LIMK1-203ENST00000435201 TMTC2Q8N394 836 aa19.45■□□□□ 0.7
LIMK1-203ENST00000435201 FSIP1Q8NA03 581 aa19.45■□□□□ 0.7
LIMK1-203ENST00000435201 ENGASEQ8NFI3 743 aa19.45■□□□□ 0.7
LIMK1-203ENST00000435201 INCENPQ9NQS7 918 aa19.45■□□□□ 0.7
LIMK1-203ENST00000435201 ANAPC4Q9UJX5 808 aa19.45■□□□□ 0.7
LIMK1-203ENST00000435201 PCDHA7Q9UN72 937 aa19.45■□□□□ 0.7
LIMK1-203ENST00000435201 TACC3Q9Y6A5 838 aa19.45■□□□□ 0.7
LIMK1-203ENST00000435201 POLR3DP05423 398 aaPredicted RBP19.44■□□□□ 0.7
LIMK1-203ENST00000435201 RXRAP19793 462 aa19.44■□□□□ 0.7
LIMK1-203ENST00000435201 FBXO33Q7Z6M2 555 aa19.44■□□□□ 0.7
LIMK1-203ENST00000435201 ADGRA1Q86SQ6 560 aa19.44■□□□□ 0.7
LIMK1-203ENST00000435201 MAST2Q6P0Q8 1798 aa19.44■□□□□ 0.7
LIMK1-203ENST00000435201 WTAPQ15007 396 aa19.43■□□□□ 0.7
LIMK1-203ENST00000435201 PDZRN4Q6ZMN7 1036 aaPredicted RBP19.43■□□□□ 0.7
Retrieved 100 of 20,778 RNA–protein pairs in 15.2 ms