RNA–Protein interactions for RNA: ENST00000431736.6

UBE4A-202, Transcript of ubiquitination factor E4A, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene UBE4A, Length 6,061 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE4A-202ENST00000431736 BTDP43251 543 aa5.49□□□□□ -1.53
UBE4A-202ENST00000431736 PTPN12Q05209 780 aaKnown RBP5.49□□□□□ -1.53
UBE4A-202ENST00000431736 RETREG2Q8NC44 543 aa5.49□□□□□ -1.53
UBE4A-202ENST00000431736 ADCY3O60266 1144 aa5.49□□□□□ -1.53
UBE4A-202ENST00000431736 KRT24Q2M2I5 525 aa5.49□□□□□ -1.53
UBE4A-202ENST00000431736 WWC2Q6AWC2 1192 aa5.49□□□□□ -1.53
UBE4A-202ENST00000431736 SOCS4Q8WXH5 440 aa5.49□□□□□ -1.53
UBE4A-202ENST00000431736 EHMT1Q9H9B1 1298 aa5.49□□□□□ -1.53
UBE4A-202ENST00000431736 POLLQ9UGP5 575 aa5.49□□□□□ -1.53
UBE4A-202ENST00000431736 ABCC12Q96J65 1359 aa5.49□□□□□ -1.53
UBE4A-202ENST00000431736 C4AP0C0L4 1744 aa5.49□□□□□ -1.53
UBE4A-202ENST00000431736 TNS1Q9HBL0 1735 aaKnown RBP5.49□□□□□ -1.53
UBE4A-202ENST00000431736 MAGEB6P1A0A0J9YX57 407 aa5.49□□□□□ -1.53
UBE4A-202ENST00000431736 MSCO60682 206 aa5.49□□□□□ -1.53
UBE4A-202ENST00000431736 KCNA3P22001 575 aa5.49□□□□□ -1.53
UBE4A-202ENST00000431736 PPIL2Q13356 520 aa5.49□□□□□ -1.53
UBE4A-202ENST00000431736 ZYXQ15942 572 aaKnown RBP5.49□□□□□ -1.53
UBE4A-202ENST00000431736 USP17L2Q6R6M4 530 aa5.49□□□□□ -1.53
UBE4A-202ENST00000431736 RASAL3Q86YV0 1011 aa5.49□□□□□ -1.53
UBE4A-202ENST00000431736 ZNF296Q8WUU4 475 aaPredicted RBP5.49□□□□□ -1.53
UBE4A-202ENST00000431736 GAS2L1Q99501 681 aaPredicted RBP5.49□□□□□ -1.53
UBE4A-202ENST00000431736 RTFDC1Q9BY42 306 aaPredicted RBP5.49□□□□□ -1.53
UBE4A-202ENST00000431736 FKBP1AP62942 108 aaKnown RBP5.49□□□□□ -1.53
UBE4A-202ENST00000431736 GINM1Q9NU53 330 aa5.49□□□□□ -1.53
UBE4A-202ENST00000431736 CEMIPQ8WUJ3 1361 aa5.49□□□□□ -1.53
UBE4A-202ENST00000431736 PER1O15534 1290 aaPredicted RBP5.49□□□□□ -1.53
UBE4A-202ENST00000431736 SLC17A8Q8NDX2 589 aa5.49□□□□□ -1.53
UBE4A-202ENST00000431736 FSD1Q9BTV5 496 aa5.49□□□□□ -1.53
UBE4A-202ENST00000431736 DIAPH3Q9NSV4 1193 aa5.49□□□□□ -1.53
UBE4A-202ENST00000431736 CPA4Q9UI42 421 aa5.49□□□□□ -1.53
UBE4A-202ENST00000431736 HPS5Q9UPZ3 1129 aa5.49□□□□□ -1.53
UBE4A-202ENST00000431736 PPATQ06203 517 aa5.48□□□□□ -1.53
UBE4A-202ENST00000431736 NBPF9Q3BBW0 867 aa5.48□□□□□ -1.53
UBE4A-202ENST00000431736 FOXP4Q8IVH2 680 aaPredicted RBP5.48□□□□□ -1.53
UBE4A-202ENST00000431736 FAM151AQ8WW52 585 aa5.48□□□□□ -1.53
UBE4A-202ENST00000431736 ZNF594Q96JF6 807 aaPredicted RBP5.48□□□□□ -1.53
UBE4A-202ENST00000431736 UBE2OQ9C0C9 1292 aaKnown RBP5.48□□□□□ -1.53
UBE4A-202ENST00000431736 PI4KBQ9UBF8 816 aa5.48□□□□□ -1.53
UBE4A-202ENST00000431736 UBN2Q6ZU65 1347 aa5.48□□□□□ -1.53
UBE4A-202ENST00000431736 C19orf81C9J6K1 198 aa5.48□□□□□ -1.53
UBE4A-202ENST00000431736 WNT10BO00744 389 aa5.48□□□□□ -1.53
UBE4A-202ENST00000431736 MAPK4P31152 587 aa5.48□□□□□ -1.53
UBE4A-202ENST00000431736 RUFY2Q8WXA3 655 aa5.48□□□□□ -1.53
UBE4A-202ENST00000431736 TNPO1Q92973 898 aaKnown RBP5.48□□□□□ -1.53
UBE4A-202ENST00000431736 PPP2R3CQ969Q6 453 aa5.48□□□□□ -1.53
UBE4A-202ENST00000431736 SPDYE2BA6NHP3 402 aa5.48□□□□□ -1.53
UBE4A-202ENST00000431736 SPDYE6P0CI01 402 aa5.48□□□□□ -1.53
UBE4A-202ENST00000431736 CCDC178Q5BJE1 867 aa5.48□□□□□ -1.53
UBE4A-202ENST00000431736 FAM47CQ5HY64 1035 aa5.48□□□□□ -1.53
UBE4A-202ENST00000431736 ZBED2Q9BTP6 218 aa5.48□□□□□ -1.53
UBE4A-202ENST00000431736 BICC1Q9H694 974 aaKnown RBP5.48□□□□□ -1.53
UBE4A-202ENST00000431736 MCM9Q9NXL9 1143 aa5.48□□□□□ -1.53
UBE4A-202ENST00000431736 RGPD3A6NKT7 1758 aaPredicted RBP5.48□□□□□ -1.53
UBE4A-202ENST00000431736 RGPD4Q7Z3J3 1758 aa5.48□□□□□ -1.53
UBE4A-202ENST00000431736 DCDC2CA8MYV0 355 aa5.48□□□□□ -1.53
UBE4A-202ENST00000431736 MINDY4BA8MYZ0 360 aa5.48□□□□□ -1.53
UBE4A-202ENST00000431736 PDHXO00330 501 aa5.48□□□□□ -1.53
UBE4A-202ENST00000431736 ACTN1P12814 892 aa5.48□□□□□ -1.53
UBE4A-202ENST00000431736 RRP12Q5JTH9 1297 aaKnown RBP5.48□□□□□ -1.53
UBE4A-202ENST00000431736 IFNL1Q8IU54 200 aa5.48□□□□□ -1.53
UBE4A-202ENST00000431736 GPRC5AQ8NFJ5 357 aa5.48□□□□□ -1.53
UBE4A-202ENST00000431736 CUL5Q93034 780 aa5.48□□□□□ -1.53
UBE4A-202ENST00000431736 HOXC10Q9NYD6 342 aa5.48□□□□□ -1.53
UBE4A-202ENST00000431736 ZBBXA8MT70 800 aa5.48□□□□□ -1.53
UBE4A-202ENST00000431736 CCER2I3L3R5 266 aa5.48□□□□□ -1.53
UBE4A-202ENST00000431736 TULP1O00294 542 aaPredicted RBP5.48□□□□□ -1.53
UBE4A-202ENST00000431736 ENTPD3O75355 529 aa5.48□□□□□ -1.53
UBE4A-202ENST00000431736 PDE8BO95263 885 aa5.48□□□□□ -1.53
UBE4A-202ENST00000431736 CYP2B6P20813 491 aa5.48□□□□□ -1.53
UBE4A-202ENST00000431736 RALYLQ86SE5 291 aaKnown RBP5.48□□□□□ -1.53
UBE4A-202ENST00000431736 CCDC155Q8N6L0 562 aa5.48□□□□□ -1.53
UBE4A-202ENST00000431736 CNKSR2Q8WXI2 1034 aa5.48□□□□□ -1.53
UBE4A-202ENST00000431736 HHIPL2Q6UWX4 724 aa5.47□□□□□ -1.53
UBE4A-202ENST00000431736 NOB1Q9ULX3 412 aaKnown RBP5.47□□□□□ -1.53
UBE4A-202ENST00000431736 C5P01031 1676 aa5.47□□□□□ -1.53
UBE4A-202ENST00000431736 CSPP1Q1MSJ5 1256 aa5.47□□□□□ -1.53
UBE4A-202ENST00000431736 CERKLQ49MI3 558 aaPredicted RBP5.47□□□□□ -1.53
UBE4A-202ENST00000431736 RNF180Q86T96 592 aa5.47□□□□□ -1.53
UBE4A-202ENST00000431736 PCDH10Q9P2E7 1040 aa5.47□□□□□ -1.53
UBE4A-202ENST00000431736 MSRAQ9UJ68 235 aa5.47□□□□□ -1.53
UBE4A-202ENST00000431736 RGS3P49796 1198 aa5.47□□□□□ -1.53
UBE4A-202ENST00000431736 ABCB5Q2M3G0 1257 aa5.47□□□□□ -1.53
UBE4A-202ENST00000431736 SCYL3Q8IZE3 742 aa5.47□□□□□ -1.53
UBE4A-202ENST00000431736 NAPBQ9H115 298 aa5.47□□□□□ -1.53
UBE4A-202ENST00000431736 SAP30BPQ9UHR5 308 aaKnown RBP5.47□□□□□ -1.53
UBE4A-202ENST00000431736 HERC5Q9UII4 1024 aaKnown RBP5.47□□□□□ -1.53
UBE4A-202ENST00000431736 USP17L15C9J2P7 530 aa5.47□□□□□ -1.53
UBE4A-202ENST00000431736 USP17L10C9JJH3 530 aa5.47□□□□□ -1.53
UBE4A-202ENST00000431736 USP17L13C9JLJ4 530 aa5.47□□□□□ -1.53
UBE4A-202ENST00000431736 USP17L11C9JVI0 530 aa5.47□□□□□ -1.53
UBE4A-202ENST00000431736 USP17L18D6R9N7 530 aa5.47□□□□□ -1.53
UBE4A-202ENST00000431736 USP17L22D6RA61 530 aa5.47□□□□□ -1.53
UBE4A-202ENST00000431736 USP17L17D6RBQ6 530 aa5.47□□□□□ -1.53
UBE4A-202ENST00000431736 USP17L19D6RCP7 530 aa5.47□□□□□ -1.53
UBE4A-202ENST00000431736 USP17L20D6RJB6 530 aa5.47□□□□□ -1.53
UBE4A-202ENST00000431736 RAB11FIP3O75154 756 aa5.47□□□□□ -1.53
UBE4A-202ENST00000431736 FLOT1O75955 427 aa5.47□□□□□ -1.53
UBE4A-202ENST00000431736 USP17L24Q0WX57 530 aa5.47□□□□□ -1.53
UBE4A-202ENST00000431736 MAP3K11Q16584 847 aa5.47□□□□□ -1.53
UBE4A-202ENST00000431736 FAM83AQ86UY5 434 aa5.47□□□□□ -1.53
Retrieved 100 of 20,778 RNA–protein pairs in 18.8 ms