RNA–Protein interactions for RNA: ENST00000429629.6

GARNL3-204, Transcript of GTPase activating Rap/RanGAP domain like 3, humanhuman

TSL 5

Gene GARNL3, Length 694 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GARNL3-204ENST00000429629 KRT26Q7Z3Y9 468 aa18.11■□□□□ 0.49
GARNL3-204ENST00000429629 IDI2Q9BXS1 227 aa18.11■□□□□ 0.49
GARNL3-204ENST00000429629 TDRD3Q9H7E2 651 aaKnown RBP18.11■□□□□ 0.49
GARNL3-204ENST00000429629 TMOD2Q9NZR1 351 aa18.11■□□□□ 0.49
GARNL3-204ENST00000429629 ADAMTSL1Q8N6G6 1762 aa18.1■□□□□ 0.49
GARNL3-204ENST00000429629 PASKQ96RG2 1323 aa18.1■□□□□ 0.49
GARNL3-204ENST00000429629 PDE6AP16499 860 aa18.1■□□□□ 0.49
GARNL3-204ENST00000429629 CYP7A1P22680 504 aa18.1■□□□□ 0.49
GARNL3-204ENST00000429629 TSHZ3Q63HK5 1081 aa18.1■□□□□ 0.49
GARNL3-204ENST00000429629 CDC42EP5Q6NZY7 148 aa18.1■□□□□ 0.49
GARNL3-204ENST00000429629 EDC3Q96F86 508 aaKnown RBP18.1■□□□□ 0.49
GARNL3-204ENST00000429629 NOL10Q9BSC4 688 aaKnown RBP18.1■□□□□ 0.49
GARNL3-204ENST00000429629 USP40Q9NVE5 1235 aa18.1■□□□□ 0.49
GARNL3-204ENST00000429629 PCDHAC2Q9Y5I4 1007 aa18.1■□□□□ 0.49
GARNL3-204ENST00000429629 ASTN2O75129 1339 aaPredicted RBP18.09■□□□□ 0.49
GARNL3-204ENST00000429629 TCRBV5S4A2TA0A5A2 114 aa18.09■□□□□ 0.49
GARNL3-204ENST00000429629 ADD2P35612 726 aa18.09■□□□□ 0.49
GARNL3-204ENST00000429629 BTDP43251 543 aa18.09■□□□□ 0.49
GARNL3-204ENST00000429629 TNNI2P48788 182 aa18.09■□□□□ 0.49
GARNL3-204ENST00000429629 RHBDL3P58872 404 aa18.09■□□□□ 0.49
GARNL3-204ENST00000429629 MAGEB6Q8N7X4 407 aa18.09■□□□□ 0.49
GARNL3-204ENST00000429629 AKAP11Q9UKA4 1901 aa18.08■□□□□ 0.49
GARNL3-204ENST00000429629 ENTPD3O75355 529 aa18.08■□□□□ 0.48
GARNL3-204ENST00000429629 C1QTNF8P60827 252 aa18.08■□□□□ 0.48
GARNL3-204ENST00000429629 USP48Q86UV5 1035 aa18.08■□□□□ 0.48
GARNL3-204ENST00000429629 DEFB129Q9H1M3 183 aa18.08■□□□□ 0.48
GARNL3-204ENST00000429629 CLRN2A0PK11 232 aa18.07■□□□□ 0.48
GARNL3-204ENST00000429629 RNF113AO15541 343 aaKnown RBP18.07■□□□□ 0.48
GARNL3-204ENST00000429629 GLIS2Q9BZE0 524 aaPredicted RBP18.07■□□□□ 0.48
GARNL3-204ENST00000429629 RFX7Q2KHR2 1363 aa18.06■□□□□ 0.48
GARNL3-204ENST00000429629 ZNF532Q9HCE3 1301 aa18.06■□□□□ 0.48
GARNL3-204ENST00000429629 RASA3Q14644 834 aa18.06■□□□□ 0.48
GARNL3-204ENST00000429629 SUPT20HL1Q3ZLR7 823 aa18.06■□□□□ 0.48
GARNL3-204ENST00000429629 ADGRA1Q86SQ6 560 aa18.06■□□□□ 0.48
GARNL3-204ENST00000429629 FAM151AQ8WW52 585 aa18.06■□□□□ 0.48
GARNL3-204ENST00000429629 WDHD1O75717 1129 aaPredicted RBP18.05■□□□□ 0.48
GARNL3-204ENST00000429629 TTC22Q5TAA0 569 aa18.05■□□□□ 0.48
GARNL3-204ENST00000429629 APPBP2Q92624 585 aa18.05■□□□□ 0.48
GARNL3-204ENST00000429629 HOOK2Q96ED9 719 aa18.05■□□□□ 0.48
GARNL3-204ENST00000429629 RIOK1Q9BRS2 568 aaKnown RBP18.05■□□□□ 0.48
GARNL3-204ENST00000429629 VEZTQ9HBM0 779 aa18.05■□□□□ 0.48
GARNL3-204ENST00000429629 MAGEB6P1A0A0J9YX57 407 aa18.04■□□□□ 0.48
GARNL3-204ENST00000429629 FKBP1BP68106 108 aa18.04■□□□□ 0.48
GARNL3-204ENST00000429629 FSD1Q9BTV5 496 aa18.04■□□□□ 0.48
GARNL3-204ENST00000429629 AATFQ9NY61 560 aaKnown RBP eCLIP18.04■□□□□ 0.48
GARNL3-204ENST00000429629 FAM198AQ9UFP1 575 aa18.04■□□□□ 0.48
GARNL3-204ENST00000429629 RPAP1Q9BWH6 1393 aaPredicted RBP18.04■□□□□ 0.48
GARNL3-204ENST00000429629 UNCXA6NJT0 531 aa18.03■□□□□ 0.48
GARNL3-204ENST00000429629 HIP1O00291 1037 aa18.03■□□□□ 0.48
GARNL3-204ENST00000429629 APLP1P51693 650 aa18.03■□□□□ 0.48
GARNL3-204ENST00000429629 TEPSINQ96N21 525 aa18.03■□□□□ 0.48
GARNL3-204ENST00000429629 TRIM6-TRIM34B2RNG4 842 aa18.02■□□□□ 0.48
GARNL3-204ENST00000429629 TCP10L2B9ZVM9 353 aa18.02■□□□□ 0.48
GARNL3-204ENST00000429629 ADM5C9JUS6 153 aa18.02■□□□□ 0.48
GARNL3-204ENST00000429629 NF2P35240 595 aa18.02■□□□□ 0.48
GARNL3-204ENST00000429629 NFIAQ12857 509 aa18.02■□□□□ 0.48
GARNL3-204ENST00000429629 ZMYM1Q5SVZ6 1142 aa18.02■□□□□ 0.48
GARNL3-204ENST00000429629 TEX11Q8IYF3 940 aa18.02■□□□□ 0.48
GARNL3-204ENST00000429629 SH3RF3Q8TEJ3 882 aaPredicted RBP18.02■□□□□ 0.48
GARNL3-204ENST00000429629 CDCA5Q96FF9 252 aa18.02■□□□□ 0.48
GARNL3-204ENST00000429629 DHX36Q9H2U1 1008 aaKnown RBP18.02■□□□□ 0.48
GARNL3-204ENST00000429629 TAOK2Q9UL54 1235 aa18.02■□□□□ 0.48
GARNL3-204ENST00000429629 CNTNAP1P78357 1384 aa18.02■□□□□ 0.47
GARNL3-204ENST00000429629 TRAF5O00463 557 aa18.01■□□□□ 0.47
GARNL3-204ENST00000429629 RGS3P49796 1198 aa18.01■□□□□ 0.47
GARNL3-204ENST00000429629 MAP3K10Q02779 954 aa18.01■□□□□ 0.47
GARNL3-204ENST00000429629 CST9Q5W186 159 aa18.01■□□□□ 0.47
GARNL3-204ENST00000429629 MIGA1Q8NAN2 632 aa18.01■□□□□ 0.47
GARNL3-204ENST00000429629 CRNKL1Q9BZJ0 848 aaKnown RBP18.01■□□□□ 0.47
GARNL3-204ENST00000429629 HELLSQ9NRZ9 838 aa18.01■□□□□ 0.47
GARNL3-204ENST00000429629 TMEM88BA6NKF7 163 aa18■□□□□ 0.47
GARNL3-204ENST00000429629 GSPT1P15170 499 aaKnown RBP18■□□□□ 0.47
GARNL3-204ENST00000429629 GNAT2P19087 354 aa18■□□□□ 0.47
GARNL3-204ENST00000429629 CACNB3P54284 484 aa18■□□□□ 0.47
GARNL3-204ENST00000429629 DYNLL1P63167 89 aaKnown RBP18■□□□□ 0.47
GARNL3-204ENST00000429629 BMP2KLQ5H9B9 411 aa18■□□□□ 0.47
GARNL3-204ENST00000429629 GIMAP6Q6P9H5 292 aa18■□□□□ 0.47
GARNL3-204ENST00000429629 OSBP2Q969R2 916 aa18■□□□□ 0.47
GARNL3-204ENST00000429629 RILPL2Q969X0 211 aa18■□□□□ 0.47
GARNL3-204ENST00000429629 AIDAQ96BJ3 306 aa18■□□□□ 0.47
GARNL3-204ENST00000429629 HHIPL1Q96JK4 782 aa18■□□□□ 0.47
GARNL3-204ENST00000429629 STRBPQ96SI9 672 aaKnown RBP18■□□□□ 0.47
GARNL3-204ENST00000429629 PUS7LQ9H0K6 701 aaKnown RBP18■□□□□ 0.47
GARNL3-204ENST00000429629 CREBZFQ9NS37 354 aa18■□□□□ 0.47
GARNL3-204ENST00000429629 ATP8A2Q9NTI2 1148 aa18■□□□□ 0.47
GARNL3-204ENST00000429629 MKRN1Q9UHC7 482 aaKnown RBP18■□□□□ 0.47
GARNL3-204ENST00000429629 ATRNL1Q5VV63 1379 aa18■□□□□ 0.47
GARNL3-204ENST00000429629 COL2A1P02458 1487 aaPredicted RBP18■□□□□ 0.47
GARNL3-204ENST00000429629 MYH13Q9UKX3 1938 aa18■□□□□ 0.47
GARNL3-204ENST00000429629 PPP1R12BO60237 982 aaPredicted RBP17.99■□□□□ 0.47
GARNL3-204ENST00000429629 CELF2O95319 508 aaKnown RBP17.99■□□□□ 0.47
GARNL3-204ENST00000429629 HSPA6P17066 643 aa17.99■□□□□ 0.47
GARNL3-204ENST00000429629 SDSP20132 328 aa17.99■□□□□ 0.47
GARNL3-204ENST00000429629 MAP3K11Q16584 847 aa17.99■□□□□ 0.47
GARNL3-204ENST00000429629 C2orf69Q8N8R5 385 aa17.99■□□□□ 0.47
GARNL3-204ENST00000429629 TMEM39BQ9GZU3 492 aa17.99■□□□□ 0.47
GARNL3-204ENST00000429629 OSBPL5Q9H0X9 879 aaPredicted RBP17.99■□□□□ 0.47
GARNL3-204ENST00000429629 DDX4Q9NQI0 724 aaKnown RBP17.99■□□□□ 0.47
GARNL3-204ENST00000429629 TBC1D12O60347 775 aa17.98■□□□□ 0.47
GARNL3-204ENST00000429629 MBD4O95243 580 aa17.98■□□□□ 0.47
Retrieved 100 of 20,778 RNA–protein pairs in 13 ms